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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9704_c2_seq1
Scaffold_idBomo_Scaf005
NCBI non-redundant
(nr)		LIM_and_SH3_domain_protein_Lasp_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0007279 P pole cell formation
GO:0007283 P spermatogenesis
GO:0007291 P sperm individualization
GO:0008270 F zinc ion binding
GO:0014881 P regulation of myofibril size
GO:0015629 C actin cytoskeleton
GO:0030018 C Z disc
GO:0031672 C A band
GO:0045214 P sarcomere organization
GO:0045856 P positive regulation of pole plasm oskar mRNA localization
GO:0046872 F metal ion binding
GO:0070864 C sperm individualization complex
GO:0071689 P muscle thin filament assembly
Transcript
Level		FPKM:10.07 TPM:11.03
ORF EntryO_BomoFB10087_complete:A_BomoFB_comp9704_c2_seq1
Sequence
(Nucleotide)
AGTTATGTGTACACTTTTATTTTGGTATTAAGTAAACTTTAAACAATAGCTGGTTAAAAT
GCATTTAGGATCCATCTACCAAAAGGGTTGCCCGGAAAATTCTTTATATTATATTTTAAG
TGCAAATCTAGATTTTTTTTTAATAATATTAATGCTGTAACTGATGTAACTGTTTAGACT
CCGGACGAAGTATTTATTATTATTTTCAATAAACAAACATAGTTACAAGTACCAATTATA
AATAATAGTTCTCATAAGGCCGGCATTTTTTTTTAATTATTCTTAAAGATTAAAAAAGAT
GAAAAACATGCAAAATCTAAATCAATTGGTAATGAATATTTTTTGAAGTGTTTTTATCAG
TGAGTGGATCGTCCTAATTCAATTGTATTGCCGTAATGCAGACGCCGGTGCGGTCTCGAC
GTAGTTGGCTGGCAGCATGCCCGCCATGCCGGTGCGTACCACCTGACCCATCATCCAGCC
CTCGTCTATAGCACTTACATTCATTATGAGGTCGCCTTCACGGAACGACACCTCATCACT
GTCGTTGGCTTCGTAATCATACATTGCTATGTACACTTGCGGATTCTGTGAGCTAGCCGG
TCTCTGAACTTCATTGGCCAACGGATCCAGATCGGTTACGCGACCGATCTGCCTTGACTG
CTGATGTTGTGTTTGATGACTGCTACCTCTTTGCTTTCCATCGTTTGTGCTGTTATAGAT
GACGGTGGCGGAGGCCCTTTGCGTATTCGGAGGAGCCCTAGGCCCGTCGCTCAACGGATC
GTAATCCTGAATCCTACCGATCTTGGGCTGACCAGAGGATCCGTAATTCTGGGCGTATTG
CCCATAATATTGACCCTGGTAATCTTGGTATTGGTATCCGATATCCTCTTTGGGCTGATA
GTATTGTTCTGGGTAACGATTTTGCGGGATTGTGGAATTGTGAGTTTGCTGATAATGGGA
AACTGGTTGGCTGTGTTGGGGTAGGGTTTGGCTGTGCTGGGGTGCATTTTGAGCGTGTTG
GGGTACGTTTTGGGTGTGATGGGAAACGTTCTGAGCGTGGGGGTTTTGGGGGTAATGGGG
CAGACTCTGTCCGTGCTGCGACATACTTTGGTTGTTCGATAGATTCTGGTTGTGATTGGG
TAGAGGTTGGGTGTAGTGTTGTTGGCTATGCCCGGAATGGGTCTGGTGTTGGGTGGTCGG
GATCTGATAGTGGTTTTTGGGGGGTAGGTTCGGGGGGGGCACGTTAGGCTGTAGCATTTC
GTTCGCGTAATTGTCTATCTGCTGATGGTAATTATCCGGCGGCGGCACATCCACTATTTC
TCCGTTTTCGTTGATCTGCCTCTGCCTCTCCATCTGGGCTTTCTTCTCGAGATCGCCGTG
GTAAGCCACGTTACTTATGATCTTCGTGTTCGCTTTGATCCTTAGGGTCTCAGGATCGTC
TGCCACCTGTGTGAATTTCCCTTTACTCCTCTCGAAGTCGGCGTGGTACTTCACGTTGCT
CTGTAGTTTCGTGTTTTCGGCGATCCGTTTCAGTTCAGGTGTTTCGGCCATTGTCGTCGG
TTTCGCTTTCGGTACGTGAGCTTCACAATAAGGCAGCTTCCCGTAGCCCTTGTACGTTCT
CATGTTCAAGGTCATACTGCACTCTTGGCATTTGAAGCAGCCCTTGTGCCAAACCTTGTC
CAAACATTTCAATTCCTCGGTAGGATAAACTGTTTTCTCGCACCTCGCACAAGTTTTATT
CATCTTGAACGGTTTTAAGCCAATAGCACTTAAATAAAATAAAAGCACTACACTTTCACA
GAGCAACACAAGTAATCACGATTCACGAACAAACTTTAGATATAACTTTTTTAAGGAAAC
ACTCCGGAGCACGATTTTCGTAGCATCCCCGTACGCGC
(1898 bp)

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