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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9686_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_lys-63-specific_deubiquitinase_BRCC36-like_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000922 C spindle pole
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
Transcript
Level		FPKM:1.96 TPM:2.15
ORF EntryO_BomoFB10044_complete:A_BomoFB_comp9686_c0_seq1
Sequence
(Nucleotide)
TTTATTAGGAATTTAGGAACAATGTTTAATTCTAAAAATATTAAAAAGTGTAACGTTTAA
CCGCATAACAATTACAAATATAAATTTTGAAATGCTACAAAAGGTCCGTTTATCGTCTGA
TGTTGCTTTGGTCTGTATGCAACATGCGTTGTCGACAGAGAAAGAAGAAATCATGGGCTT
ACTTATAGGCGAGGTTCATGATAATGGTGCACTTGTTTCAATAGTGTCATCAGTAATACT
TCGCCGTTTGGATAAAAAACCTGACCGTGTTGAAATATCAGAAGAACAACTGGTTCAAGC
AACTGTTAGAGCTGAAGAATTAGCTGCAGAAGTTGGCCAACCTCTTAGAGTTGTTGGATG
GTACCATTCGCATCCTCATATAACAGTGTGGCCATCCCATGTTGATTTGGCTACTCAATC
AATGTATCAAAGGATGGATGCTAGTTTTGTTGGAATTATTTTTGCAGTATTTCTTACAGA
CCAATCAACAAAGGCCCCTTCAGTTCAAATTACTTGTTTTCAATCAATTAATGAAGGAGC
TAGTCAAAGTCGGATTGAAATAGAAATGGAAATTGTAACTAACACTGATTCTTTGTTAAC
AAACAATTTCGAGACACTAACTCAGCTTCCAACAATTTTAAAAGAGGAAGAAGATGAAGC
CTTTAATAATGAAATTAGTTATGATGATACTGATGACATTGTCACTAAGCAACATAATGC
TGCAGTAAGGACTATTGCTATTGGCCACATTGTTGATAAGATGTCCCGACCAATGCTAGA
AGGTTTAGTGGCCAGAAATTTATTAAACAGTATACGCTTAAAAGCATTGAAGAAACAGCA
TCAGCAGATGATGTCTAAATTAGAAAATATGACATGCTTGACCTAAACTTGTTTCAAAGA
TTAAGTAAACCAATTAATAACTAAGTGAATTCATTTTTATCAATAATTTCAAATCCATCT
GATGAATCTTTACTTGACATTCGTTTTCTTGTTGCTTCGTTTGTGGTCTTCATCATATTA
CTTAAAGCACCAGTAAAATTCCATAATGTATTATAAGCACTGTTGGTCCATGTGTTTGGT
TCGGATACTTCCAAGGTTGTCTGTAGTTGTGGATCTTTCAGGTGTGGATCTAGAGGTATA
TATTCATCTTCACTGGAGTCTGATGTTTCAATATCCTTTTCTAGTGTGTTTATTTTATCA
ACAGAGAAACTTGTATCAAGACTGCTGTTTTCAGAGCTATCGCTTGCTTCTTCAAGTGGA
ATATCTTCTGGTTTCCAATAATCTAAACCAGGAGTTTTTCTTTTATTTTATGAGAGTCAG
AGAAACATATAGGATATGCAATGGAAGCCTGAATAATAATTTAAAGAGAAATCATGGGAC
TGTGGTACTTATCATTAGAACTCATGTCTCAAGGTGGTTGGTGGCATTTAAGTTATTGAT
GTCTATGGGTTCCGGATATAACTCAAAATTAGATGAGCCTACCATCCCATCTACCCATCA
CATAAATAAATAAAAACTTACAGTAAGAAAGGCAGTATGAGAACTACTTTCAACATGACA
TTGAATTTTATCATTAAATCAAATAAAGGATCG
(1593 bp)

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