SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp3035_c0_seq1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_supporter_of_activation_of_yellow_protein_[Bombyx_mori]
Ontology
GO:0000791 C euchromatin
GO:0000792 C heterochromatin
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005701 C polytene chromosome chromocenter
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0008270 F zinc ion binding
GO:0016458 P obsolete gene silencing
GO:0031936 P obsolete negative regulation of chromatin silencing
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0046872 F metal ion binding
GO:0070604 C RSC-type complex
Transcript
Level		FPKM:3.05 TPM:3.34
ORF EntryO_BomoFB1254_internal:A_BomoFB_comp3035_c0_seq1
Sequence
(Nucleotide)
ACCAAGACACAATATCTATTAATCATTCAATAATCAACAATGAAAATTGTGCAAAAAATG
GAAATTCTAAATTACACAATATTCTCTCAAATTTACAGGCAAAGCAAATGCAGTCAATTT
CATTAATTGATAGTAATAATTCAATAAAATCTGTGATGACTAATCCAGAAGTTATTTCTG
ATCCGCCAGTAAGTGGTATGGCGGATGTAACCGAATCTGTGAGTGAAAATTGTCATCCCA
AAGTTCAGGAGATGTTAATTAATGAGAATTCGGATTTTCGAGATAACAGCATTCCTACCG
ACGAAGCATCACAGGATCCTCTCGAAGTCGACACTTCTAAGATTTCAGAAAACGTCGCAA
ACGAGAGCAGCATTGCCATCAGGCCTGAAGAATTCACGCCCCAACCGAAGAAACGAGGTC
GACCCCGTAAATTGCCTACCTCGGAAGGAGCCAAACCGGTTACACTCCCAGTGACGGCGT
TAGAAGAACGACCGCAACGTTCACTTCGGTTGACGAGGGAGCGTCCTTCAATAGTGACGA
AACCGCGAGGAGGGCGAGGACGCGGACGAGGTGGAAGGCGCGCCGAGGCCGAGCCATCGC
TAGCTGCCAACCCAACTCATCCTACCGACAACCCTACCGAAGAGATCGATCCCACCAGCT
CACGAGTGAAGCTCCCGCGTCTTACTGAGGCACTTGATCGCATGCCAGGAGGATGTGTTA
CGCCATTGTCGAGTCGCCGACGTGGTTCGGTGGAGCCCGAACCTAAGGTGGTACTCGAAG
CGGTGACACTAGATGAGATGACTGTACGGCCAGAGAGCACGCCGGGCCGAGGCCGGGGTT
CTCGAGGGGGCCGCACACCGCGCGGTCGCACGCCACGTTCCAGGGCGCGGGGGAGAGGAG
GAGGCCGCGGCGCCGTCTATATGAAGGAAACCCTGGGCATTTACGGTCGTGTTTGCGGCC
ACGCGACGACCACCGTGCAACTCTTTGAAGAAGAAACATGCATGATGGACGACAACGCAA
CGCCTGCCAAACCTTCACATCTTCTGGATGAGGATTCACAAAGCTCAATCAAAAGTTTAA
CAAATGAGAGTAGCAAATTAAAGAAGTCAAAATTTGCAGACTTGTTTGACAGTAATAAGC
AATGGACAGCAGCAGATGTGAAGGAATATATTTGGCCACATCCTGGAAATAGTGAACCTC
AGGTCATGATGATACAAGAGCAGGTGGCGATGTTCCTTGGCGTGAAGAGCTTCAAAAGAA
GATATCCTGAACTAAAACGGAGATCCATCGTTGGTGACGAAAAGGATTATGTTTTAGCAA
AAAGATTGGCTACAGAAGCTCTATGCGACTTAGGTATAACAGCAGTGGATGCGAGCGAAG
TCTTGGATATCATGCTATCAGATTATCCACATAAGTATGAGGAATATCGTGCATACCAGC
GGGAAAGACAACTCACTGAACCAGAAGAGATAGTAACTGAAGTGAAGATGGAAGATAAAC
TGACAAAAAGTGATGTAAAATCAGAAAAATCTTCTGATCACAAACCGGAAGGACCTAAAA
TCGACCCTGAGAAGTTGAGACAGGATATGGCGGCTGCAGCGATAGCGTCGGCCAGCGAGT
GGAACGCGCGCATGAACGCCAGCCGCAGCGTGGCGTGCGTCGACCTGCAGAGCATGACGG
(1680 bp)

- SilkBase 1999-2023 -