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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp3004_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_endonuclease_III-like_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0002230 P positive regulation of defense response to virus by host
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003824 F catalytic activity
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006285 P base-excision repair, AP site formation
GO:0006296 P nucleotide-excision repair, DNA incision, 5'-to lesion
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016829 F lyase activity
GO:0019104 F DNA N-glycosylase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:2.50 TPM:2.74
ORF EntryO_BomoFB1231_3prime_partial:A_BomoFB_comp3004_c0_seq1
Sequence
(Nucleotide)
GTTTTGTATTTTGGAATCATAATTACATTTTCTTGAAATGTTCATTCTATTGATTAAATA
GTATTAATTAAGATATGACAATCTGTTTTTCATTAATAACATATTTAAGACACATTGGAT
AGGATATTGAAAGGAAACAACGAAAATACGTGAAAAGCAAACAGATACAGAACAGAATAT
GGAGAACAGGAACAAGGTTACAGAAAACAACATTGGCTCAGAGACCGCCATAGCAGTACC
TGATTTAAGCCAATTCAAATTCGAGAAAAAATCTCATGTAAAAATTAAATTTGAAAAAGA
ATCTCCAAGCAAGCAAGAACCTGAAGGCTTATGGGAACCACCAAATTGGAGACAGTTTTT
TTTGAACCTGAAGATTATGAGAGCTAATAATGATGCTCCAGTAGATACAATGGGATGTCA
TATGAACATGGATGAGAATGTACCACCAGAGGTGTACAGATATCAATGCTTAGTTTCTCT
GATGCTATCAAGCCAAACCAAGGACCAAGTTAACTTTACTGCTATGCAGAGGCTTCGGGC
TCGGGGTCTTACAGTTGATAATGTGTTGAGTATGAGTGATGAAGAACTAGGTCAGTTGAT
ATATCCTGTTGGATTTTGGAAGACAAAAGTAAAATACATAAAAAAAACAACAGGAATTCT
AAAAGAGCAGTACAATGGAGACATCCCCGATTCAGTCGAAAAGTTGTGCAAACTGAATGG
TGTTGGTCCTAAAATGGCACATATTTGTATGAAGGTTGCTTGGAACAAGATCACTGGAAT
CGGTGTTGACACACATGTACATAGGATATGCAATAGGATTGGATGGGTCAAAAAACCAAC
TAAAACTCCTGAGGAAACTCGCCTAGCTCTACAGAGTTGGTTGCCTTTTGAACAATGGAG
TGAAGTTAATCATCTACTTGTTGGATTTGGCCAAACTATATGTCAACCAATAAAACCTAA
TTGTGGAGAATGCCTGAATAATGATATTTGCCCTGCAAGTACTATAGGGAAAAAATCGCC
AAAAAAATCTGACAAACAAACCAGAGATAAAATTGAAGTTGGAATTAAAATTGAAGCTGA
TATGGAAGATTTTCAAGTAAAAAATGAAAAGACTTGGAAAACTATAAGTCCAAAAGTGAA
TACCAAGATTCAAGATTTAGAATTGGACAAAATTAATACATCTACACCACAAAAACATCA
AGATT
(1205 bp)

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