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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp3001_c1_seq1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_centrosome-associated_zinc_finger_protein_CP190_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005704 C polytene chromosome band
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007017 P microtubule-based process
GO:0008017 F microtubule binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031937 P obsolete positive regulation of chromatin silencing
GO:0035191 P nuclear axial expansion
GO:0043035 F chromatin insulator sequence binding
GO:0046872 F metal ion binding
GO:0051493 P regulation of cytoskeleton organization
GO:0090202 P obsolete gene looping
Transcript
Level		FPKM:2.89 TPM:3.17
ORF EntryO_BomoFB1226_3prime_partial:A_BomoFB_comp3001_c1_seq1
Sequence
(Nucleotide)
CAGATACTTTACTGTTTTTAATGTCTATTGTTATTTTAGGAGCATCATTCTGATCTAAAA
TCTGATCAAAGAGTTGATTGGAGTCCATAATTGGTTTATTCTTCTTTAAATATGTTGTTT
GGAACATCTCATTTTCATCAAGTATACCACTCTCCAAGTAATTATCTTCAAAGATGTTAT
CAACACTTTTCTTACATTCTATAATGTCTAAAGTTGTTGTGTGTTTACTATCACTTGAAG
AATTATTGAACAGACCACTTTTTTTAGAGTAACGCTTCTTAGTGTCAGGATGTACCATCA
ACGGTTGAGATGTATAGGATATGTTACAGAAGGAACTGTCAAACACCCCATCACCATCAA
ACTCTTCTGATAGCTCATATCTTGTAGGTTTTGGATCTGTCATTAGATTTTTTTTATTTT
GTATATAAGGAGATGATGGACGGTACATTATTTCTTTATTTATATTCACAGGTTTATATA
CTTTTTTCTCTTTGCATGCACTCTTGTTGTCAAAAGCTTTACCATATGAGCGTTTATTAC
TAGTAGATGGAGTAGGTTCAGAGCTTTTATGTTTTGGAGCATAGCACTGTGGATTCTGAC
TGGCACGGTGAGCTTTCAGAAGTTTAGTTAGCACAGGCATTTTCATAATGAGAGAAGTTT
GGTAAAGTTTCTCAAGTAAATCCAACCTGAACTCTAATTGTCCAGTGTACATGAAGTTCA
CTATAGGTACAACGACATCAGCCTGAAGATCGTCCGGCATCACGAGACAATCTTCATACA
TTTCGCATGTTCTCTCCAAAACTTCAAAATATTCTGTACAAGCATTTAAAACCAGTCTGT
GGACTTTCAACTGTGCGTTGTCTTGGAATTGTAGCGTTAAATCACAATAGTCAGTGCGGT
TAAAGAAATGTTTTAACCTTTGGAGGAAATAAATTCCCCAGTTATCCACTTTCACTTGCC
TTAACTCCGACATAGCGGCGGTTTCAATGTTTTTTCATTATAGGTTATATTTGCAGTATA
TATATCTCATCGAGTGAAAATCAAAATATCGTAGTTTGTATTTCAATTACTTGACTTCAA
CACGACTCTACACAGTTTTACTTCACTAAATTTGACCGAAGTTGACAGCGAATACGTAAG
(1140 bp)

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