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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp2854_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		putative_pre-mRNA-splicing_factor_ATP-dependent_RNA_helicase_PRP22_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:6.22 TPM:6.82
ORF EntryO_BomoFB1060_5prime_partial:A_BomoFB_comp2854_c0_seq1
Sequence
(Nucleotide)
GCCCGCCCGCCCGGCGCGCTGCTTCGCCGCCGCCTGCGATATAGGAGTTACAACCAACGA
ATCCATTCCAGTCTTCGAGTTGTAGACTTTCTGTTTAACGAAGCCAGGGTCCACCACGTA
GTATATACCGTCGATGGTCAGCGACGTCTCCGCGATGTTGGTGGCGATCACCACCTTCCT
GGAGCCGGGGGGCGCCGGCTCGAAGATCCGGGTCTGCATCTCGGACGGCAGCGCAGAGTA
CACCGGCAGAATTATCAGCTCCGGCACGTCCGGCCCCAAGGACTTCATTCTCTCGTACAA
TATCTCACACGCCGTGTCAATCTCTTCTTGGCCAGTGAGGAACAGCAGGATATCCCCCGG
GGGCTCCCTCAGGTGGATCTGCATGACCGTGATCAGTGAGGCGTCCAAATAGTCCGTCTC
CGGTTCCTTGGTGTACAAGACTTCGACGGGGAAGGTTCGACCGGGGATGGTGAAGATCGG
GGCCTCGAAGAAGTACTGCGAGAACTTGACGGCGTCGAGCGTGGCGGACGTGACGATGAG
CTTGAGTTCGGGGCGCTTCTGCACGGCCTGCTTCAGCAGACCGAACAGCACGTCGGTGTG
GATGGTGCGCTCGTGCGCCTCGTCCAGCATGATCACCGAGTACGCCTTCAGGTCCAGGTC
CATGAGGCACTCGCGGAGCAGCATGCCGTCCGTCATGTATTTGATGACAGTGTCCGGGCT
GGTGCAGTCCTCGAAGCGTATGGTGTAGCCCACCTCCTGGCCCAGCCGGCAGCCGAACTC
CTCGGCAACGCGCTTGGCGACGGACATGGCG
(811 bp)

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