SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp2805_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_E2/E3_hybrid_ubiquitin-protein_ligase_UBE2O_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006513 P protein monoubiquitination
GO:0016567 P protein ubiquitination
GO:0016740 F transferase activity
GO:0030513 P positive regulation of BMP signaling pathway
GO:0031625 F ubiquitin protein ligase binding
GO:0042147 P retrograde transport, endosome to Golgi
GO:0044822 F RNA binding
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:0070534 P protein K63-linked ubiquitination
Transcript
Level		FPKM:0.31 TPM:0.34
ORF EntryO_BomoFB1005_complete:A_BomoFB_comp2805_c0_seq1
Sequence
(Nucleotide)
ACATGTCCATACCATCACAAACGCGCGCGCATGTACAACCAATACACATCTAAACATTAC
TTAACGAATAAAAACATAGAATGCACTTTAAGAAGTACATTTTATATAGCATACCTTGTA
TAGATCCTGTGGCCAGCACATGCTGATGTGACCATCGACCCACCACACCTTCACTCGACC
AGTAGGAAAGTTATCAATGACCTGTCCCGCAGTGCAGTTGGCGTCTTCCCCGGTGAAGTT
GGCGACGCGTATGACCACGGTCCCGGGCCGGTACTGGAAGTCCGGATGGTCCTTCAAGTC
GTACACGCTCACTTCACTCTCGTACAGCATTTGTGGAACAGGTTCGTCAGCGCTCGTGTA
CGTGCGGTACCAGTGCACGATGGCAGTGCGGCCGTGGTGGTCCACGCGCTGGACCACGCC
GTACTCTCGGTGTTTTAGCTGTTGGTTCTCCTCGATGTTAGCGGCGCCACTAACTACGAA
GTCTCCCGGGAAACACTCCTGGCCATCGAGGTGGTGGATAGGGTACAGCTGAGTCGAAGG
AATGCCCATTTCAATTGTACCATCCTGCCAGACGACGTTGGCCCGGCTGGTGGTGTGCAG
CGTCTCCACGACGACGCGGTCGTTGTGCTTCGGGGGCGGGGCG
(643 bp)

- SilkBase 1999-2023 -