SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp126958_c0_seq1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_sorting_nexin-27_[Amyelois_transitella]
Ontology
GO:0001772 C immunological synapse
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008289 F lipid binding
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016197 P endosomal transport
GO:0030904 C retromer complex
GO:0031901 C early endosome membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0035091 F phosphatidylinositol binding
GO:0071203 C WASH complex
GO:1990126 P endocytic recycling
Transcript
Level		FPKM:2.12 TPM:2.33
ORF EntryO_BomoFB20414_3prime_partial:A_BomoFB_comp126958_c0_seq1
Sequence
(Nucleotide)
GATCTCGAAGAGGTAGAAGTACTGCTGCACCGTGTCGGCGAGGCGGATCTTGTCGGCGAC
GGCGCGGTACACGAGGTCGGCGCGCGTGGAGCGCAGCACGGACACGGTGGCCACGTCGCG
GTCCGGCAGCAGCACCTTCAGCTCCACGGGCGCCGGGTTCGAGCTGTCGTCGCAGTCCGT
CAGGAACTCCTGCACGCTCTCGCACTCCGCGATCACGCGCACCGCGCACACCTTTTCCAA
ATACTGTTCTAGCCCCCTCCTCCTCGAGTCGAGCTGCTGTTCGCTCAAAGTAAATGGCCA
TTTTCCTGGTAATTTAGGGAAGTTGAATCCGATAAACTCCTTCCTGAGGACTTGGTGTAG
GGCCGCGAATTCCCTGTACCTTCTGCTGCAGAGATGCCGCCCGGCCATGTGGATATTGAA
CGCTATGTACGACCTGCCGGTATTTCTCTCCATGACGATCCTGTAGTCCGGTATAGAGAC
GGGCAGAGATCTCTTGTCGGTATAGTCGTAGCGCTGGTAGACCGTCGCGCGAGAGTTGGC
TGCCCCTCCGATAACTCCCACCGGACCTGAGCTGTCGCCGCATGGTTCCAGGCGCTCTGC
TTCGCTCTGTGCGACTGAAATGGCTGTGGGAGTGAGACATCTGCCACGGGCATTATTGAG
GTGCACACT
(669 bp)

- SilkBase 1999-2023 -