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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp126086_c0_seq1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_SAGA-associated_factor_11_homolog_[Papilio_machaon]
Ontology
GO:0000124 C SAGA complex
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0071819 C DUBm complex
Transcript
Level		FPKM:2.85 TPM:3.13
ORF EntryO_BomoFB20400_5prime_partial:A_BomoFB_comp126086_c0_seq1
Sequence
(Nucleotide)
GCTCAGTATGAACGATTTAAACAGTAAATTCTTTGAAATAATGCAAAATGAAGACAACGC
CGTCGAAGCGACAAATTTTATATACGATCAATTGTTTGACGACGTAACCTTGGGCATCTT
GTTTGAATTCCATCATGGGGTGAAGACCGGCCTTACAGATCTGATAGAAGGGGAGAAAGA
AGAAGAAGAGCCCTATAAAATAGTAAATACATCCGAGTGTGACGTATTCGGATTTTCAAT
GATGAAAAAGACCCCAGATTCAAACTGCTCGTGTCCAAATTGTGAGCGACCGGTGTCGGC
AACGAGGTTCGCGCCTCACTTAGAGAAATGTATGGGAATGGGTAGAAACAGTTCTCGTAT
CGCATCCCGCCGGATTGCCTCAAACAGTCGTGAACCTACCTCTTATGCTGGACTACTAAG
TGATGATGATGATGATGCTGACTGGGCCGGGGGCTCAATGCAAAATGAACGCCGGAAACG
ACGAATTAAAAACAACAATAACAGGAAACCAAATAAAATGCACAATGGTAACAGCAGAAA
TGGTCACCTGAACAATGATGCTAATGATGGCAGTACTACCTATGAAACAATGACTGCCAA
TGAGAAGAAAAATCTATTATTACACAGCTGTGGTGTTGTTTCTGAACACACTAAGAAGTT
TTGCACCAGGTCGACTCGGTGTCCCCAGCACACTGAAGAGCAACGCCGGGCCGTACGTAT
CAGTGTATTAGAGCCCTCAACTCCAGAGTCTCAAATGATGGGTCTAACCCCTGACGAGGC
CAGCTCTCCGCCCGATTCCAGTCCATCTTCGTCTTGTTCATCGTCGAGTCGCAAGCGCGA
TCGCCACCGAGCCCCACCAAAGATGAAAAACAAACGGGAAAGGAACATCTCGCCGAGCCA
AAGAGAATAGAGTTTACACAAGATCCTGCTCAGATGATTGGCACGGAACTTTTGGAAGGC
TGAGCTGGTGATTGATAAAAAGTGAACTGGTGTTTTTTTTTTGTGTGATACATTTCAGGA
TAACGTACTACTTGTTCAAGTGATCTAAAATACTTAGTTCTGTGATGAGACATTTCTAAC
AAAGTAAAAAGATGATTTGAGATGTTGTTCTGTTACATTATAACTAAGTCTGGTGTTTCG
ATTGTGACTGTCGATGGATCTCATTATTTCAA
(1172 bp)

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