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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp121105_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		Cytoplasmic_protein_NCK1_[Operophtera_brumata]
Ontology
GO:0001771 P immunological synapse formation
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005802 C trans-Golgi network
GO:0006417 P regulation of translation
GO:0007015 P actin filament organization
GO:0012506 C vesicle membrane
GO:0016192 P vesicle-mediated transport
GO:0016477 P cell migration
GO:0030032 P lamellipodium assembly
GO:0030838 P positive regulation of actin filament polymerization
GO:0032403 F protein-containing complex binding
GO:0033137 P negative regulation of peptidyl-serine phosphorylation
GO:0036493 P positive regulation of translation in response to endoplasmic reticulum stress
GO:0042102 P positive regulation of T cell proliferation
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048013 P ephrin receptor signaling pathway
GO:0060996 P dendritic spine development
GO:0097110 F scaffold protein binding
GO:0097481 C postsynaptic density
GO:1902237 P positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway
GO:1903898 P negative regulation of PERK-mediated unfolded protein response
GO:1903912 P negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation
GO:1990441 P negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
Transcript
Level		FPKM:2.51 TPM:2.75
ORF Entry
Sequence
(Nucleotide)
TGGAGGGCGGCGCCTACTGCATCGGCCAGCGCAAGTTCCCCTCGCTGGAGCTGCTGGTGG
CGCACTACCAGCGCGCGCCCATCTACACCAACAAGCACGGCGAGAAGCTGTACCTCGTGC
GCCCGCTGCCGCGCCCAAAGCTCTGCTGATCCGCATCCGACAACATTCACTACTTTAAGG
CCTTCAGTTAAAGGGTATTTTAGCTCCTCACCCCTTGTCAGTTAAGGTTCCCACCAACGT
CACGCCGGACTCGCAGGTCGTTCGTAATCATTATTAGAATACATACATTATCAGCTAGCG
ACAACTTCACTTATCATTAAACTATTACAATCATAATCGCTTGACGTTTTCTGTAGCTTT
AAATAATACTCATTGCATACAGTAAAACGACGCTCAGTGCCCCGCGCGCGCCGCCGTGCT
CTGGTCGGAGGGACGCACTATGGGAGGACGTTCATTAAATGAATAAAAATTTCAGAATAT
ATCTTATTCAAAAAATAATCTTCAAAATTTATGTGAAATTAGTTTAAATACATTAAGTAG
GTTTTTATATTATCTTAGCTTTTAAATATAGCAGCCGACACGGCTCTATGTAGCGCGGGG
GCGGCCGGGAGCTGCGCCCCCCTGCCCCGGTGCTCCGCCGGCGGCGCACTCATATAGCGA
TAATCTGAAATATATCGATAGGGGAACGTCGCAAATCAGTCTTCGCAAAATTAGTCAATA
TTATATGGATATAGTATTTGATAGCTAGAAAGAATATTACCAGTCCAAACCTATGGAGCG
AGGAGACTTGGCACGACTTAATTACGCGGTTATGCACGACGCGCACCGCACAATGGTAAC
GCACGACGCGGCGGTGTGCGGCGTGCTGTCTGACCCATCGCTAGACACAGTCCTAGATAA
ATTCATTAATGAAACTTATCCAAAATGTCAAAATCGGCATCATCGGGATGTCATTTGCGT
ATCAAGAATTACCTACTATATTTATTACTCATTAATGCTTTGTGAATTGTATCAATAAAA
AAGTTTATTGATATTTGATGTCAAATCGTAGTTCACGGGCTCGAAAAATGTTGACCGAAA
CAGGTTCAACTGAGAACTTGATTACGGTTTTGGAGGCCCCCGATGTAGTGCCCCGGCAGG
CACCCCGCGCCCCCCACCCACGCCCCCTGTACGTCTCGCTCTAAGCGCGCGCAGTGAGCG
AGACGTGACGTCAGCGGCGCGCGGACACGTCAGCGTAGCGTAGAAGTTAACCCAATTTTG
TATGCA
(1266 bp)

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