SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp115141_c0_seq1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		putative_histone-lysine_N-methyltransferase,_H3_lysine-9_specific_[Danaus_plexippus]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000790 C chromatin
GO:0002039 F p53 binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006275 P regulation of DNA replication
GO:0006306 P DNA methylation
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0009267 P cellular response to starvation
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0018027 P peptidyl-lysine dimethylation
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0046872 F metal ion binding
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0046976 F histone methyltransferase activity (H3-K27 specific)
GO:0051567 P histone H3-K9 methylation
GO:0070734 P histone H3-K27 methylation
GO:0070742 F C2H2 zinc finger domain binding
GO:1901796 P regulation of signal transduction by p53 class mediator
GO:1990841 F promoter-specific chromatin binding
Transcript
Level		FPKM:3.28 TPM:3.59
ORF EntryO_BomoFB20083_5prime_partial:A_BomoFB_comp115141_c0_seq1
Sequence
(Nucleotide)
CACCTCCGTGCGGACGAACGTCGCGCCGCGCGAGGACAGCTTGCCCACCAAGTTATTCGT
ACACTTCTTCTTGTTACACGCGCAGGTGGCGTTGCATTCGAAGAGTACGGGCGGGTCGTG
GTGCGGGAAGTTGGGCGGCAGGCGGCCCGCGCGCGCCCAGCGCCGCACCGACAGCACGCA
GCACGCGCACGACTCCGACGAACACGAGCCCTCCTTGCACGTGCAGCCCTGCATCGTCTG
TATGGTGTTGTCTATGGGGATCTGCGTGGGCATGACGTGCGACGTGACGTACACGAAGTC
GTCGGGCAGCGGGGTAGAGTCCACTTCGTTGACGCACGGTATCGGATACATCTCGCACCC
ATTCGAAATGTCAAAGGATAGAACGTTTCGCTGGCCGAGCTTCTCTGTGACCGCGAGATT
CATCTGCATGCTGAGCGAGATGGCGCGCCGGCTGGGGTCTGTAGCCACGTCGATCGGGAG
CTCCCCGGAAGAATTCGCAACGTCCGTCTTGGCGCCTCTGGCCAGCAGGATCACGACGCA
CGAGTAGTGGCCTTGTCTCGCTGCGACATGTAGCGGCGTGTCGAGGTGCGCGTTGTGCGC
GTGCGCGGCGGCGG
(614 bp)

- SilkBase 1999-2023 -