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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp114283_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_transducin_beta-like_protein_3_isoform_X1_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
GO:0044822 F RNA binding
Transcript
Level		FPKM:2.31 TPM:2.53
ORF EntryO_BomoFB20021_3prime_partial:A_BomoFB_comp114283_c0_seq1
Sequence
(Nucleotide)
TGCATACAATTTACAGTGTAGGTAATGAAATTTAAATCTTGAAGAAGATTCGTTAGGCGC
TCAAAATGTCTCTCGGTATATGGTAAAGCGCCCTCTATGAAATTAGCCAAAGAAGGCACT
TTTAGATTACCTGAAATAATTTCCGGAGCTAATATATTAAAGACAAGTTGAGCAGCGTGA
CAATTTTTATTGTTTGTATTCCATTCTACTGCAAATTTTAGTAACGTTTCTTTTTGCGTG
TGGCTAATATCGCTTAATGTTTCTCTAAGCTTTTCACTTCCACCTTTCAGAACTTCATTC
ACTATTTTTAACACGTGCAGTGGCCTGTCCATTCGTAATGCTAATTTTAAAGCTTTGAGT
AATTTTTTGTCATGAAGTAAGTTATTTAATTCCTGTTCTTGCAAAATCAGTGCTTCTCTC
TCCTTGGTCCTTCTTTCTCTTTGTTCCAATGTTACATCTTTTAATTTCACTAATTTTGAA
TCAGAACCACCTGTGATTATGTATGATTCATTTTTGGATATAGCTAATGACCACACTTTA
CCATCATGGTTGTCTAATGACATTTTACTTTCTGATGTTTTGATAGTCCATAACTTTAAT
AATCCATCAGCTCCACTGGATAAAATCTGTTGGCCTTTACTAATGAACTCAACTTTCAGA
ACAGAACTTTCATGACCTTCGAAAGTTTTTAGGCAACTTAAATCACTTATGGACCATAAT
TTAATGGAACTGTCAGCTGAAGATGTTAGCACTACTTGATCGACAGGAGAAAATCTTACA
CACCACACTCCCCTTCTGTGACCTTTTAATACACCTAACAGTGTCAAGTCTTCTGCCCAA
ATCTTTGCAGTTTTATCTTGTGAACCAGTAGCTATCATTTTATCATTGGGTGATACTGCA
ACACAATTAATGTCCATTTGGTGAGCTAATTCAGTGTGACTACATTTAAGATTTTGTTCT
ACACATTTTTCTGCAGGCTTACATACAGTCCAAACTTTTATGCAATTATCTTGACTAACC
GAGGTAAAGAAATCATCGGATGTTTGTGAAGTGTAAACAGACCCAACAGAAGCAGTATGG
CGAGTTCCAACTGCAAGGCAATGAATAGTGTTGTTTGGTGTTTGAAGCCACAATCGAACG
CTATTGTCTTTACTTGATGAAACAAACATTTCAAGTTTAGTTGGAAAGTTTGCTAAGGAG
AGCACTATATCTGTGTGACCTTTAACAATTTGACAATTCATAGTTTCTAAATCATAATAC
TTCAGATCTTGGCTATTTGTGGCAACAATTATATGGTTCTCGTTTTTTCCCAAAAATATT
ATGTCAAGAACTTCATCAGTGAAACCAATCATCTGTTTCACAGAGTCAAATGTTTCTAGG
TCATGTATTATAATGTTATGATCAACTGTCACTACAGAGACCATATTTCTTGCTTGATTA
TATAGTAGGTGCGTTATTGACAGCCCTCCTTCTTCAGTTGACGGGGATACTAAACTATTG
ATTTGTTCAAACATGAGTCGGCTCATTGACAAATTCCATACTTTAACAATTCCTTTTTCT
CCAGCACAAGCAACATAAACCCCTTCAGTTTCCAGCTTTTTATTAAAATTTGGGATTTTA
AATGAAGGTGGTAAGAGAATGCAGGATTCAATTCCTTCATACACAGGAACAACTTTAAGA
GCTTTGCTAACATTTAAATCCCACAATATGAGTACTCTGTCCCTCCCAGAGCTGACCATG
TATTTACCATCAAGTGTGAATAGCAAAGCAGTTACCTTACTAAAATGACCTGAATATACT
AATTGCTCTTTACCAGTTTTAGAACACCAGGATCTAATCTTTGTATCATCTGCTGCTCCA
AATACTAATTGTTTAGAAGAATCTGGATGATACTCTAACACAGAGAAAACACCCATAGCT
CCACGAAGACTGCTAGTACAGGTATTATGTCCTACATCCCACAGTCTCACATTACCGTCG
GAACCTCCTGAAGCAATATTTTCATCTGTTGAATCAAAGGCTAACTTCACAACAGGTCCT
TTATGGCTTGATCTCCAAATTTTTAGTTGGACTCCAGTTTCTTTGTCCCACATTTTAATT
AGGCCACTTTTGTGTGCAGTAACAATACTTTGATTACTATGTGATATTTTAAATGTATAA
ATCTGGTCATTTTCTGCATCTTCCTCAGTTTCGCCAATAATAAGAGAAGTGATTAGAGTG
TCGACTTCAACCACCTTAATAGCTTCATCACATAGGCAAAGCATTTGTAAGCCATCATTT
GTCCACTGTATATCACCACCTGTATAAAATGCAGTAAACTCTGCACTTTTCTCATATATT
TCTTTTAAATTTGACATTGCTCTGGATTACTGTTTTAGTAAAACAAAAAAATCAAAGCAA
AGAATATATTTTAACGATCATATTATCCTTAGCAAGCCTAAATAAGAGCTCAAAATCAAA
ACCAAATCTTCAACTTCTTTAGAA
(2484 bp)

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