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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp108880_c0_seq1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_afadin_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007267 P cell-cell signaling
GO:0008022 F protein C-terminus binding
GO:0017016 F small GTPase binding
GO:0030054 C cell junction
GO:0034332 P adherens junction organization
GO:0043547 P positive regulation of GTPase activity
GO:0090557 P establishment of endothelial intestinal barrier
Transcript
Level		FPKM:2.73 TPM:2.99
ORF EntryO_BomoFB19798_3prime_partial:A_BomoFB_comp108880_c0_seq1
Sequence
(Nucleotide)
GTTGTGTTGTGATTAACTTGTGATAAGTGTTAACGGTTCTCTGAAGTACTTGTAGTTAAA
AGTTTTGTATTACAGAAAAGTTTTTGAAGTGATTGTTCTGGTGTTTTTGTTATTAGATTA
CGTAAAAAAATGATTGTGCTTACATTTGAAGATGTTACTAGATAGTATGGCGTAGATTTT
TGCTACACTCACGGCTGTCAATGGACATCTAGCCACGAATATCCTGCATTAAAAAACTGG
ACTTGATGCGGTGACACGATGGACCCAGCGGACAAGCGTATGTTGGAGCGTGAAGCGCTT
CGCAACATGATACACCAATGGAACGCCAACCGGCTCGATCTGTTCGCGCTCAGCGAACCC
AATGAGAATCTGGAGTTCCACGGTGTGATGCGTTTCTACTTCCAAGATCTGGGTCAGAAG
ATAGCAACGAAGTGTATCCGTGTCGCCTCCGACGCCACCGTCAGCGATGTCATAGAGATA
CTAATCGAGAAATTCCGTCCGGACATGCGTATGCTGTCACTCGGCTCGTACTCGTTGTGG
GAGACCCACGGCCCCGACGACGAGCGCCAGCTGGAGCCGCACGAGAAGCCGCTCCTCGTG
CAACTCAACTGGCACGCGGATGATAGAGAAGGGAGATTCCTACTTAAGTGCCTTACTAAC
AATGAAGCCTCCGTCATAGGATCCGACAAGGGAGACCAAAACTTCAAAAGAAAATTATCC
AAGAGAGAGAAAAAAGAATTGAAGAAAAAAGAGAAGCTGTCGAGATTGAAGTCTGATACT
AACGATGAGAATCGACCCGTTGCCGAAAAACTTTACACAGAACTGCCGGAAACATCGTTC
ATGAGAAGCATCAGTAACCCTGAAGCGGTGATGCGTCGTCGTCGACAACAAAAGCTAGGG
CGCAAGCTACAGCAGTTCAAGTCGAAAGACGGAGGACCCGATACCGGAGGAACGCTGAGG
ATCTACGGCGGTATACTGAGACCCGATGTTTCGTACATAACGCTACTCCTGTCGGTCAAC
GATTCGGCGGCGACCGTTCTTAAAGAAACTCTCGAAAAATACGGAATGGGACATCAGGAC
CCTCAACAGTTTTGTATCGTTCAGGAAGACAAGACTGACAACACGGAGTACATACTGGAA
GATGACGAGTGTCCGTTGGCGCTGATGAATATGACTCGGAGCTCTATCATGTTCCACGTG
CGGCGGCGTCCGGCGGACTCACAGCCACGGCGACGGAAGAAGAAGGTCGGCACAGGCACC
AACGGGCGTCCAGGCAACGAACCTTTACTTCTGGAGGTCGCGCCCGACGCCACGCCTCTA
GAGAATGGACGCAGAATCCGGATTACCGAAGTCGTCG
(1357 bp)

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