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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10558_c8_seq41
Scaffold_idBomo_Scaf029
NCBI non-redundant
(nr)		PREDICTED:_glycoprotein-N-acetylgalactosamine_3-beta-galactosyltransferase_1_isoform_X2_[Papilio_polytes]
Ontology
GO:0006486 P protein glycosylation
GO:0009247 P glycolipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016263 F glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity
GO:0016267 P O-glycan processing, core 1
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0021551 P central nervous system morphogenesis
GO:0046872 F metal ion binding
GO:0048531 F beta-1,3-galactosyltransferase activity
GO:0051489 P regulation of filopodium assembly
GO:1902037 P negative regulation of hematopoietic stem cell differentiation
Transcript
Level		FPKM:0.27 TPM:0.29
ORF EntryO_BomoFB16035_5prime_partial:A_BomoFB_comp10558_c8_seq41
Sequence
(Nucleotide)
CGACGAGCGAAGGTGTCATTATATTATATGAATAGCAAATGTATCGCCAGTAAATACGTA
GAGCTCATTAGTATTTAAAAACAAAATCTGATTTAAATATTAATTTTTACATTGTTGCTT
ACAAAGGAAGGTCGGGTGATGGGTCGTCGATTTGTGCTAACCCTGGTGATCGGCATATCG
GCCGGATTTAGTTTTGCGTACATATTATTAACATCCACGGCAGGCTCAAGGGATGTGGCT
TGGCCAGCGTACAGAGAGTCCCTACGTGACCTCGACAGACATCCAATAGTGAATATAGTT
GATCACGGAAGCGACGAACCGGCCCACAAGGATGAGGACCGATCGATTGCCGACGAACTG
TCCAAACGCGTCAGAGTGTTGTGCTGGGTGATGACGCAGCCGAGCAACCATGAGAAAAAG
GCCAAACACGTGAAGGCCACGTGGGGGAAACGGTGCAATAAACTACTCTTCATGAGCAGC
GTTGAAGACAGCAACCTGCCATCGGTAAAGCTTCCCGTGCAAGAAGGTCGAGATTACTTG
TGGGCGAAGACGAAAGCCGCCTTCAGATACGTGTACGAACATCACCGGAGGGAGGCCGAC
TGGTTCCTGAAAGCCGACGACGATACTTATGTTGTCGTCGAAAATCTGAGGTACATGTTG
GCTGACTACAGTAGCAACGATCCTGTGTACTTCGGATGCAGGTTCAAGCCGTTTACGCCC
CAGGGGTACATGAGCGGCGGCGCGGGCTACGTGCTCAGCCGGGAGGCGCTGGACCAGTTC
GTGAACAAGGCGCTGCCCTCCCCGCATCTGTGCAAGGCCAGCGACCACGGCGCAGAGGAC
GCGGAGATCGGCAAATGTCTCCACAACATCGGGGTGAGGGCGATGGACTCCCGCGACTCG
ATGAGGCGGGGCCGGTTCTTCCCGTTCGTCCCGCAGGACCACCTGTTCCCCAACAAGGAC
AAGGGCTTCTGGTACTGGAGCTACATCTACTACCCCAGCGACGAGGGCCTGGATTGTTGC
TCCGACCACGCCGTGACGTTCCACTACGTCAACCCGCAACAGATGTACGTGTTCGACTAT
CTCATATACCACCTTCGGCCTTACGGCATCACGTTCGGAGCTGGCGAGCTGCCCAAGATA
CTCAGGAACGATACCAAGTAGATATTTACTTTAGTAACTAGTCAGACCCCACGGAGGTTA
CGTTTGAAGAAGAAAAAAAAAGAAAAGATAAAAAACTTTCTAGTCGTTCTTAAATAACGG
CTCGCCATTGTTTCCCAAAGAAGAAAAAAACTAAGCAATATCGTACAGTACCCGGCGATA
AATATTTCACATCGGCTTTTTAAGTAAAGATATTATAGATTATCGGCTTATTTCGGCTTC
GGACACGGCTACTGATAAGCGTCTCATAGGTAGTGTGCGACAGAGATAGCGCTCCACGAA
AAACAAATTAGCAAATTGTTTCTTGTCCAAAAGTCGATGTGCAGTATTTAATGTCGGGTA
CTGTACAAAACTAAAACATTTTATTTTTTTAGTTTTTAATTCGCTATCGTTCCTGAAAAA
TTGATCGCATAATACATTCCTACAGACTTACTGTAATAAGACTAGAAACTTGTAAATATG
TTAATTGAAGAAAACTTAAAAATAAGAGAATTAAAGACATAATATTAAGGATTATTTACT
ATTAGAATATAAGACTTGATTTAACTTTTGCAAGAGTAAAGCGCTTTGTAACACTCAAAA
GCATTTTGTTTCAAAATTTAGCGCGATTAAATATAAAGTGTAGTCATAAATCTAAGGATT
CATAGTTAATGAAAATTTAAAAGGACATAAGCCAGCTTAGTTGAACTCTGCCTTAGTTTT
AGCGTTATCGTAACTAGATGTCGGTGGGTTTGACATTCTCAATGCACCAACATTAATTAC
ATGTTTATCTTTTTTGGTATTTATTATTTATTATATTTAAATATTTGATATTATTGTAAA
TACTGATTGGTACATTCGTTAATTAGAAATATTAAAAAAAAATCTGTGTATTAAGAAATG
TTTGTGTAGTTTTTAAAAACATTTGACGTCCGCATTACACGTGTATCGAACGTCAAATGA
ACAACTAACGCCATCTCTGATCTAAGCAATATACTTGTAATATTTGATATTAGTTAAAAA
ATATATAATTTATATCACGTTTAAGTGAAAAAATCTAGGTAAGTAATCTGCGTAGAAATA
TTAAAGCAAATACAATAATTATTATTACAAGAAAATACCAAAGAATCTCAAGTCTTAGAT
TAATACGTATGCAAATAGAGGTACTAATGTAGCATTTCTACGTCACTTCGTTACCTATTC
TAAATGTAAGCAAATAAGGATTTTATTTTATTATTTGAAGAAGTTTTCTAAAGACGCTTT
ATTGAAAAAGGTGTTTTAAAATTTGTTGTTGATTAAAGACCTGTATTGTATTGATGTGTA
TTTTAAGTTTGCCGGTGCGACATTGGTGGGAATATACAGCGTGTATTAACGGTTTGTAGT
AAAGCGGATCGTTCGCCTATCTAGGTGGTAATTACTTCTTCTTCTTTTTCTCCACCTTAT
CCCACTAGGTGGGGTCGGCACAGCTAATTTTTCTCTTCCATTCTCTTCTATCAGCCGTCA
TCTCAACACTCACTCCTCTCTCTCTCATATCGTCATTCACACACTCCATCCATGTCTTCT
TCGGTCGACCTCTTCCCCCTCTACCTTGCACTACCATTTCCATACATCTCCTAGTCACAT
GCATCTTCTCTCTACGCATCACATGTCCATACCACGCTAACCGTCCGCTCTTTAATTTGT
TGATTACCGGGACTACTTTCACACTTCCTCTGATATACTCATTCTTTATCTTGTCCGTTC
TGGTCACTCCACACATCCATCTC
(2903 bp)

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