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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10558_c8_seq40
Scaffold_idBomo_Scaf029
NCBI non-redundant
(nr)		PREDICTED:_glycoprotein-N-acetylgalactosamine_3-beta-galactosyltransferase_1_isoform_X2_[Papilio_polytes]
Ontology
GO:0006486 P protein glycosylation
GO:0009247 P glycolipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016263 F glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity
GO:0016267 P O-glycan processing, core 1
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0021551 P central nervous system morphogenesis
GO:0046872 F metal ion binding
GO:0048531 F beta-1,3-galactosyltransferase activity
GO:0051489 P regulation of filopodium assembly
GO:1902037 P negative regulation of hematopoietic stem cell differentiation
Transcript
Level		FPKM:2.12 TPM:2.32
ORF EntryO_BomoFB16031_5prime_partial:A_BomoFB_comp10558_c8_seq40
Sequence
(Nucleotide)
GTGTGTAGCCACTTTTTTTTTTTTTTTGTTAATTTACGAAGGTTCGATTCAAGTTGCGAT
ATATGTGTGATGAACGCCCAACAGGAAGGTCGGGTGATGGGTCGTCGATTTGTGCTAACC
CTGGTGATCGGCATATCGGCCGGATTTAGTTTTGCGTACATATTATTAACATCCACGGCA
GGCTCAAGGGATGTGGCTTGGCCAGCGTACAGAGAGTCCCTACGTGACCTCGACAGACAT
CCAATAGTGAATATAGTTGATCACGGAAGCGACGAACCGGCCCACAAGGATGAGGACCGA
TCGATTGCCGACGAACTGTCCAAACGCGTCAGAGTGTTGTGCTGGGTGATGACGCAGCCG
AGCAACCATGAGAAAAAGGCCAAACACGTGAAGGCCACGTGGGGGAAACGGTGCAATAAA
CTACTCTTCATGAGCAGCGTTGAAGACAGCAACCTGCCATCGGTAAAGCTTCCCGTGCAA
GAAGGTCGAGATTACTTGTGGGCGAAGACGAAAGCCGCCTTCAGATACGTGTACGAACAT
CACCGGAGGGAGGCCGACTGGTTCCTGAAAGCCGACGACGATACTTATGTTGTCGTCGAA
AATCTGAGGTACATGTTGGCTGACTACAGTAGCAACGATCCTGTGTACTTCGGATGCAGG
TTCAAGCCGTTTACGCCCCAGGGGTACATGAGCGGCGGCGCGGGCTACGTGCTCAGCCGG
GAGGCGCTGGACCAGTTCGTGAACAAGGCGCTGCCCTCCCCGCATCTGTGCAAGGCCAGC
GACCACGGCGCAGAGGACGCGGAGATCGGCAAATGTCTCCACAACATCGGGGTGAGGGCG
ATGGACTCCCGCGACTCGATGAGGCGGGGCCGGTTCTTCCCGTTCGTCCCGCAGGACCAC
CTGTTCCCCAACAAGGACAAGGGCTTCTGGTACTGGAGCTACATCTACTACCCCAGCGAC
GAGGGCCTGGATTGTTGCTCCGACCACGCCGTGACGTTCCACTACGTCAACCCGCAACAG
ATGTACGTGTTCGACTATCTCATATACCACCTTCGGCCTTACGGCATCACGTTCGGAGCT
GGCGAGCTGCCCAAGATACTCAGGAACGATACCAAGTAGATATTTACTTTAGTAACTAGT
CAGACCCCACGGAGGTTACGTTTGAAGAAGAAAAAAAAAGAAAAGATAAAAAACTTTCTA
GTCGTTCTTAAATAACGGCTCGCCATTGTTTCCCAAAGAAGAAAAAAACTAAGCAATATC
GTACAGTACCCGGCGATAAATATTTCACATCGGCTTTTTAAGTAAAGATATTATAGATTA
TCGGCTTATTTCGGCTTCGGACACGGCTACTGATAAGCGTCTCATAGGTAGTGTGCGACA
GAGATAGCGCTCCACGAAAAACAAATTAGCAAATTGTTTCTTGTCCAAAAGTCGATGTGC
AGTATTTAATGTCGGGTACTGTACAAAACTAAAACATTTTATTTTTTTAGTTTTTAATTC
GCTATCGTTCCTGAAAAATTGATCGCATAATACATTCCTACAGACTTACTGTAATAAGAC
TAGAAACTTGTAAATATGTTAATTGAAGAAAACTTAAAAATAAGAGAATTAAAGACATAA
TATTAAGGATTATTTACTATTAGAATATAAGACTTGATTTAACTTTTGCAAGAGTAAAGC
GCTTTGTAACACTCAAAAGCATTTTGTTTCAAAATTTAGCGCGATTAAATATAAAGTGTA
GTCATAAATCTAAGGATTCATAGTTAATGAAAATTTAAAAGGACATAAGCCAGCTTAGTT
GAACTCTGCCTTAGTTTTAGCGTTATCGTAACTAGATGTCGGTGGGTTTGACATTCTCAA
TGCACCAACATTAATTACATGTTTATCTTTTTTGGTATTTATTATTTATTATATTTAAAT
ATTTGATATTATTGTAAATACTGATTGGTACATTCGTTAATTAGAAATATTAAAAAAAAA
TCTGTGTATTAAGAAATGTTTGTGTAGTTTTTAAAAACATTTGACGTCCGCATTACACGT
GTATCGAACGTCAAATGAACAACTAACGCCATCTCTGATCTAAGCAATATACTTGTAATA
TTTGATATTAGTTAAAAAATATATAATTTATATCACGTTTAAGTGAAAAAATCTAGGTAA
GTAATCTGCGTAGAAATATTAAAGCAAATACAATAATTATTATTACAAGAAAATACCAAA
GAATCTCAAGTCTTAGATTAATACGTATGCAAATAGAGGTACTAATGTAGCATTTCTACG
TCACTTCGTTACCTATTCTAAATGTAAGCAAATAAGGATTTTATTTTATTATTTGAAGAA
GTTTTCTAAAGACGCTTTATTGAAAAAGGTGTTTTAAAATTTGTTGTTGATTAAAGACCT
GTATTGTATTGATGTGTATTTTAAGTTTGCCGGTGCGACATTGGTGGGAATATACAGCGT
GTATTAACGGTTTGTAGTAAAGCGGATCGTTCGCCTATCTAGGTGGTAATTACTTCTTCT
TCTTTTTCTCCACCTTATCCCACTAGGTGGGGTCGGCACAGCTAATTTTTCTCTTCCATT
CTCTTCTATCAGCCGTCATCTCAACACTCACTCCTCTCTCTCTCATATCGTCATTCACAC
ACTCCATCCATGTCTTCTTCGGTCGACCTCTTCCCCCTCTACCTTGCACTACCATTTCCA
TACATCTCCTAGTCACATGCATCTTCTCTCTACGCATCACATGTCCATACCACGCTAACC
GTCCGCTCTTTAATTTGTTGATTACCGGGACTACTTTCACACTTCCTCTGATATACTCAT
TCTTTATCTTGTCCGTTCTGGTCACTCCACACATCCATCTC
(2861 bp)

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