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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10558_c8_seq32
Scaffold_idBomo_Scaf029
NCBI non-redundant
(nr)		PREDICTED:_glycoprotein-N-acetylgalactosamine_3-beta-galactosyltransferase_1_isoform_X1_[Papilio_polytes]
Ontology
GO:0006486 P protein glycosylation
GO:0009247 P glycolipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016263 F glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity
GO:0016267 P O-glycan processing, core 1
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0021551 P central nervous system morphogenesis
GO:0046872 F metal ion binding
GO:0048531 F beta-1,3-galactosyltransferase activity
GO:0051489 P regulation of filopodium assembly
GO:1902037 P negative regulation of hematopoietic stem cell differentiation
Transcript
Level		FPKM:0.52 TPM:0.57
ORF EntryO_BomoFB16015_5prime_partial:A_BomoFB_comp10558_c8_seq32
Sequence
(Nucleotide)
CAAAGCTTAAAGTTTTAGCGTAGATGATTTTGTAATTTGTATGCAATTAAATATGTAGTA
GGTAACAAAAATGAGAGAGTATTTAATTACTGAGCGAATGTACCCACAGAAATGCACAAT
GACTGAAGGTCGGGTGATGGGTCGTCGATTTGTGCTAACCCTGGTGATCGGCATATCGGC
CGGATTTAGTTTTGCGTACATATTATTAACATCCACGGCAGGCTCAAGGGATGTGGCTTG
GCCAGCGTACAGAGAGTCCCTACGTGACCTCGACAGACATCCAATAGTGAATATAGTTGA
TCACGGAAGCGACGAACCGGCCCACAAGGATGAGGACCGATCGATTGCCGACGAACTGTC
CAAACGCGTCAGAGTGTTGTGCTGGGTGATGACGCAGCCGAGCAACCATGAGAAAAAGGC
CAAACACGTGAAGGCCACGTGGGGGAAACGGTGCAATAAACTACTCTTCATGAGCAGCGT
TGAAGACAGCAACCTGCCATCGGTAAAGCTTCCCGTGCAAGAAGGTCGAGATTACTTGTG
GGCGAAGACGAAAGCCGCCTTCAGATACGTGTACGAACATCACCGGAGGGAGGCCGACTG
GTTCCTGAAAGCCGACGACGATACTTATGTTGTCGTCGAAAATCTGAGGTACATGTTGGC
TGACTACAGTAGCAACGATCCTGTGTACTTCGGATGCAGGTTCAAGCCGTTTACGCCCCA
GGGGTACATGAGCGGCGGCGCGGGCTACGTGCTCAGCCGGGAGGCGCTGGACCAGTTCGT
GAACAAGGCGCTGCCCTCCCCGCATCTGTGCAAGGCCAGCGACCACGGCGCAGAGGACGC
GGAGATCGGCAAATGTCTCCACAACATCGGGGTGAGGGCGATGGACTCCCGCGACTCGAT
GAGGCGGGGCCGGTTCTTCCCGTTCGTCCCGCAGGACCACCTGTTCCCCAACAAGGACAA
GGGCTTCTGGTACTGGAGCTACATCTACTACCCCAGCGACGAGGGCCTGGATTGTTGCTC
CGACCACGCCGTGACGTTCCACTACGTCAACCCGCAACAGATGTACGTGTTCGACTATCT
CATATACCACCTTCGGCCTTACGGCATCACGTTCGGAGCTGGCGAGCTGCCCAAGATACT
CAGGAACGATACCAAGTAGATATTTACTTTAGTAACTAGTCAGACCCCACGGAGGTTACG
TTTGAAGAAGAAAAAAAAAGAAAAGATAAAAAACTTTCTAGTCGTTCTTAAATAACGGCT
CGCCATTGTTTCCCAAAGAAGAAAAAAACTAAGCAATATCGTACAGTACCCGGCGATAAA
TATTTCACATCGGCTTTTTAAGTAAAGATATTATAGATTATCGGCTTATTTCGGCTTCGG
ACACGGCTACTGATAAGCGTCTCATAGGTAGTGTGCGACAGAGATAGCGCTCCACGAAAA
ACAAATTAGCAAATTGTTTCTTGTCCAAAAGTCGATGTGCAGTATTTAATGTCGGGTACT
GTACAAAACTAAAACATTTTATTTTTTTAGTTTTTAATTCGCTATCGTTCCTGAAAAATT
GATCGCATAATACATTCCTACAGACTTACTGTAATAAGACTAGAAACTTGTAAATATGTT
AATTGAAGAAAACTTAAAAATAAGAGAATTAAAGACATAATATTAAGGATTATTTACTAT
TAGAATATAAGACTTGATTTAACTTTTGCAAGAGTAAAGCGCTTTGTAACACTCAAAAGC
ATTTTGTTTCAAAATTTAGCGCGATTAAATATAAAGTGTAGTCATAAATCTAAGGATTCA
TAGTTAATGAAAATTTAAAAGGACATAAGCCAGCTTAGTTGAACTCTGCCTTAGTTTTAG
CGTTATCGTAACTAGATGTCGGTGGGTTTGACATTCTCAATGCACCAACATTAATTACAT
GTTTATCTTTTTTGGTATTTATTATTTATTATATTTAAATATTTGATATTATTGTAAATA
CTGATTGGTACATTCGTTAATTAGAAATATTAAAAAAAAATCTGTGTATTAAGAAATGTT
TGTGTAGTTTTTAAAAACATTTGACGTCCGCATTACACGTGTATCGAACGTCAAATGAAC
AACTAACGCCATCTCTGATCTAAGCAATATACTTGTAATATTTGATATTAGTTAAAAAAT
ATATAATTTATATCACGTTTAAGTGAAAAAATCTAGGTAAGTAATCTGCGTAGAAATATT
AAAGCAAATACAATAATTATTATTACAAGAAAATACCAAAGAATCTCAAGTCTTAGATTA
ATACGTATGCAAATAGAGGTACTAATGTAGCATTTCTACGTCACTTCGTTACCTATTCTA
AATGTAAGCAAATAAGGATTTTATTTTATTATTTGAAGAAGTTTTCTAAAGACGCTTTAT
TGAAAAAGGTGTTTTAAAATTTGTTGTTGATTAAAGACCTGTATTGTATTGATGTGTATT
TTAAGTTTGCCGGTGCGACATTGGTGGGAATATACAGCGTGTATTAACGGTTTGTAGTAA
AGCGGATCGTTCGCCTATCTAGGTGGTAATTACTTCTTCTTCTTTTTCTCCACCTTATCC
CACTAGGTGGGGTCGGCACAGCTAATTTTTCTCTTCCATTCTCTTCTATCAGCCGTCATC
TCAACACTCACTCCTCTCTCTCTCATATCGTCATTCACACACTCCATCCATGTCTTCTTC
GGTCGACCTCTTCCCCCTCTACCTTGCACTACCATTTCCATACATCTCCTAGTCACATGC
ATCTTCTCTCTACGCATCACATGTCCATACCACGCTAACCGTCCGCTCTTTAATTTGTTG
ATTACCGGGACTACTTTCACACTTCCTCTGATATACTCATTCTTTATCTTGTCCGTTCTG
GTCACTCCACACATCCATCTC
(2901 bp)

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