SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10555_c1_seq4
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:3.35 TPM:3.67
ORF EntryO_BomoFB15895_3prime_partial:A_BomoFB_comp10555_c1_seq4
Sequence
(Nucleotide)
CACGGATCGAACGCACACCACTAGTGGACGACACTGGTCTCGATTGAGTCTCCTCTATCG
AATCTTCTATATTCCGAGCATGGTTTAATAATGAATTGAAAGATGTGATTTCTTCACGGC
GCAATCTTGTGCGTATTCTATTATGAAGCAACCCGTATATCATATCAAGTTGTACTTTTT
CAGTAATATCATCCCGCGGTAGCTTTGCCATAAGCGCACGAATACGAGCAACAAACTTGT
CTGTGTTTTCGTTATCCTGCGGGGAAGCAAATATTTCCAAATATATTCTATGTGGTGGAA
GGCGGGTGCCATATGCATATATTAAATTTTCTTTGGCTTCGTTCCAAGTGGAGATGTGAT
GCTTTAATCCTAGCCACCACGTAGCTGCGTCAGCAGACAAAAGCATGGCTAGGCCTCGTA
TGATGTTAGCGTCAGATACTTGAACGCATTCTGTATAGCTTTCAATTGCATCTATAAAGG
CCTCAACAGATTCACCAGGTGCACCGCTGAAAGAAGCTCTGCAACGCGCCAAGGTACCAT
CTACGTTCACTGGGGGCATCGGCGGAGGTGCCGGAGTCGACGATCTTTGTTCCATCACGT
ACGACATAATGTTCTTAAATGTTTCGGCCTGCGAACGTTGCAGCGAGGCCATCAACGCTG
AAACATCATCCAAGTTGAACGTAGAATTGTTGCTACGTGATTCGGCGTGGGGGCGATCAT
GGGGGCTATCATGCTCCTCGTGATTTTCGTTGGCATTTGCATCTGCAGCAGGAATAACGT
CGTCTTCGCGACGTTGCTGGCGATCTTGATTTCTAGTTAAAGGCATTCTTTACAATTAAG
CACCAACAGCATACAATAGTTAGCAAATTTTTCACAAAAGCGTGCGCGCCATTTTGTTAG
TCCAAGCAAGAAAAAAATTAGGAAACGTTGGGCAGCCAGATATAGTGAGGGGTAGATCTC
AGGGGTATTTAAAACTATGGGTTAGTCACCAATATCGAATTTCGAATTTTAATCTTCCTT
TATCACAAACAATTTTCAATTTTAAACAATAATTACATTTAGACGCGGGCGCACGCTATT
CACACTCAAAACGGAAGCGCCCGGAACATAGATTATACACTGTTAAAAAGATGGACATAG
ATACTAACTATGTATAGCGAGCGGGCATACGGCCGCGAGAGTGACGTACCGGTCGGTTTG
CTACATACTCCCCCTCTAGTCCTGGAGGACGCCCTCGCTCCTGGACTAGCATCTCATTAC
TACTGGGCTGAGGGACAGGCGCAAGACCAACCATACCACCAGCTGCGGGAGAAAGACGTG
GAGCTTCAGCACATGGTTCAGCATGCCGTGTCGTCATATGCCCTGGAACTCGAGAATCTG
TTTTAACATTATTTGGGGGACGACCACGTTTCTTTTTAGGCATCACCGGCCGCGGAAGAG
CATCACTCTGATTCTCACGGTATAGAGTGAGATCGTTCACATGATATTTCCCTAAAACTT
CATCAGGTTTGTCAACATGCGCGACGTGGTAAGTAGTAGGGCTGACCTTTTTAACGATGC
GATACGGACCATCGCGTTTTGGAACAAACTTAGAAGTAAGGCCTTTAGCGCTCTTACTGA
GGACGTGTGATTTGATGAGAACCATGTCACCTTCGTTGAATGTTTCAATGGGCCGTCTCG
AACGATCAGCATACCCTTTAGCTTTATCTTGAAGCGTCTCTACACGTTCGCGCACCGCTG
AAAAGGAGTTAACAAATTTCCTGAGATAGGGAGTTATTTGGGGAACAAAGTTATCTTTGT
CTAGAACAGCACGAAGGTCATGGGCGACTTCTGTGGGGGACCTCATCTCTCTGCCAAATG
ACAAGTAAGCAGGTGACATACCTGTGGTGCGACATTTAGCGTTATTAAGAGCGAATCGAA
TCACTGGTAACATGTTTGGCCAGGAAGTGTGGTCACATTCCACGAGTTGTGCTAATAAAG
TCTTAAGATCTCTGTTTTTACGTTCGGCGGGGTTTGCTTCTGGGTGATAGAGAGGGATAA
GGTTTTGCTTTATCCCCAGGATGGACATGCATTGACGCATGACTGCCGAAATAAATTGTA
CGCCATTATCAGAAACTAGTCGGCGTGGAAGACCGAACCTCATAAAATACTCCTCTATGA
GGACATGTGCACACGCCTCAGCAGTAGCTTCCTTCAATGGGAAAAGTTCTGTCCACCTCG
TAGCAGTATCTTCTATTAGCAAGATCCAACGCTCCCCCTGTTTTCCAGGTGGCAACGGGC
CGAAAAGATCAACTGCCAAGACCTCGTTGCGCTGGTTCATCACCGGCGTCTGCAATAGAC
CTGGAGGCTTGGTATTAGCAGCCTTATAGCGTTGACAATGGATACATGCCTTTACATAGT
CGGTTATGATTCTTCTCATTCCTGTGAAGTAGAACAGACGTGAGACTTGTTGGTAAGTCC
GGTCAATTCCTGCATGTCCAGCGGTAGGGGCATCGTGAAGCTCTTTGAGAATGTCGGTCA
CTTGATGGGCAGGAATGACTAATTGTGGGGCCTCGGCATCAGAATCCGGATTAAGTCGAT
ATAAAACACCTTGTTCCATTAGAAATCCTCTTTCTGACCATCTTTTAGCAGCAAGTTCAT
CCACTCCTTCCAGTTCTGTGACGATCTTCTGTATTTCCGGATCAGTCAACTGGTCTTGAC
GTAACTGGGTAGGTGACTTGGTGGGCAGGTCGCAAATGACAGAACAGATGCCGCAGTTAT
TTTGTGTTTCGTTGGAACAGATCGGTCTACTTAACGTGTCAGCGACAACGTTAGCTTTTC
CTGGGGTGTACTCGAATCTAATGTCAAATTCTTGGAGTTTAAGCGCCCAACGGACCAACC
TACCAGCAGGAGACTTTAAAGAAAGCAACCAACGCAAGGGTTGGTGGTCACTGCCTATAA
TAATTGGTTGGCCGTCGAGGTATGGCCTGAAACGCTCCACGGCCCAGACTACAGCAAGCG
CTTCCCGTTCTGTAGTAGAGTAGTTGCGCTCCGCTGCGGTGAGTAGGCGGCTAGCATACT
CGATAGGCCTTTCGTCCTTGCCTTCCCCTTGAGCTAAAACTGCGCCAAGTGCATAGTTGC
TCGCGTCGGTACGCAGTACTAAGGGTTGTTTAAAATTCGCTTGAACAGAGAGAAGTGCAC
TTTTGCCAAAGAAAGGGTCCGTTATCTGGGCCACGTCATCACTCCAGACGGTGTGTCTCC
TGACCCTGAGAAGGTCAGTGCTGTCCTTAATATGCTGGAACCATCTAATCTAAAACATTT
AAGAACTTTTCTCCAAACATGCTCTTGGTTCA
(3332 bp)

- SilkBase 1999-2023 -