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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10555_c1_seq2
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:12.37 TPM:13.56
ORF EntryO_BomoFB15892_3prime_partial:A_BomoFB_comp10555_c1_seq2
Sequence
(Nucleotide)
CACGGATCGAACGCACACCACTAGTGGACGACACTGGTCTCGATTGAGTCTCCTCTATCG
AATCTTCTATATTCCGAGCATGGTTTAATAATGAATTGAAAGATGTGATTTCTTCACGGC
GCAATCTTGTGCGTATTCTATTATGAAGCAACCCGTATATCATATCAAGTTGTACTTTTT
CAGTAATATCATCCCGCGGTAGCTTTGCCATAAGCGCACGAATACGAGCAACAAACTTGT
CTGTGTTTTCGTTATCCTGCGGGGAAGCAAATATTTCCAAATATATTCTATGTGGTGGAA
GGCGGGTGCCATATGCATATATTAAATTTTCTTTGGCTTCGTTCCAAGTGGAGATGTGAT
GCTTTAATCCTAGCCACCACGTAGCTGCGTCAGCAGACAAAAGCATGGCTAGGCCTCGTA
TGATGTTAGCGTCAGATACTTGAACGCATTCTGTATAGCTTTCAATTGCATCTATAAAGG
CCTCAACAGATTCACCAGGTGCACCGCTGAAAGAAGCTCTGCAACGCGCCAAGGTACCAT
CTACGTTCACTGGGGGCATCGGCGGAGGTGCCGGAGTCGACGATCTTTGTTCCATCACGT
ACGACATAATGTTCTTAAATGTTTCGGCCTGCGAACGTTGCAGCGAGGCCATCAACGCTG
AAACATCATCCAAGTTGAACGTAGAATTGTTGCTACGTGATTCGGCGTGGGGGCGATCAT
GGGGGCTATCATGCTCCTCGTGATTTTCGTTGGCATTTGCATCTGCAGCAGGAATAACGT
CGTCTTCGCGACGTTGCTGGCGATCTTGATTTCTAGTTAAAGGCATTCTTTACAATTAAG
CACCAACAGCATACAATAGTTAGCAAATTTTTCACAAAAGCGTGCGCGCCATTTTGTTAG
TCCAAGCAAGAAAAAAATTAGGAAACGTTGGGCAGCCAGATATAGTGAGGGGTAGATCTC
AGGGGTATTTAAAACTATGGGTTAGTCACCAATATCGAATTTCGAATTTTAATCTTCCTT
TATCACAAACAATTTTCAATTTTAAACAATAATTACATTTAGACGCGGGCGCACGCTATT
CACACTCAAAACGGAAGCGCCCGGAACATAGATTATACACTGTTAAAAAGATGGACATAG
ATACTAACTATGTATAGCGAGCGGGCATACGGCCGCGAGAGTGACGTACCGGTCGGTTTG
CTACATACTCCCCCTCTAGTCCTGGAGGACGCCCTCGCTCCTGGACTAGCATCTCATTAC
TACTGGGCTGAGGGACAGGCGCAAGACCAACCATACCACCAGCTGCGGGAGAAAGACGTG
GAGCTTCAGCACATGGTTCAGCATGCCGTGTCGTCATATGCCCTGGAACTCGAGAATCTG
TTTTAACATTATTTGGGGGACGACCACGTTTCTTTTTAGGCATCACCGGCCGCGGAAGAG
CATCACTCTGATTCTCACGGTATAGAGTGAGATCGTTCACATGATATTTCCCTAAAACTT
CATCAGGTTTGTCAACATGCGCGACGTGGTAAGTAGTAGGGCTGACCTTTTTAACGATGC
GATACGGACCATCGCGTTTTGGAACAAACTTAGAAGTAAGGCCTTTAGCGCTCTTACTGA
GGACGTGTGATTTGATGAGAACCATGTCACCTTCGTTGAATGTTTCAATGGGCCGTCTCG
AACGATCAGCATACCCTTTAGCTTTATCTTGAAGCGTCTCTACACGTTCGCGCACCGCTG
AAAAGGAGTTAACAAATTTCCTGAGATAGGGAGTTATTTGGGGAACAAAGTTATCTTTGT
CTAGAACAGCACGAAGGTCATGGGCGACTTCTGTGGGGGACCTCATCTCTCTGCCAAATG
ACAAGTAAGCAGGTGACATACCTGTGGTGCGACATTTAGCGTTATTAAGAGCGAATCGAA
TCACTGGTAACATGTTTGGCCAGGAAGTGTGGTCACATTCCACGAGTTGTGCTAATAAAG
TCTTAAGATCTCTGTTTTTACGTTCGGCGGGGTTTGCTTCTGGGTGATAGAGAGGGATAA
GGTTTTGCTTTATCCCCAGGATGGACATGCATTGACGCATGACTGCCGAAATAAATTGTA
CGCCATTATCAGAAACTAGTCGGCGTGGAAGACCGAACCTCATAAAATACTCCTCTATGA
GGACATGTGCACACGCCTCAGCAGTAGCTTCCTTCAATGGGAAAAGTTCTGTCCACCTCG
TAGCAGTATCTTCTATTAGCAAGATCCAACGCTCCCCCTGTTTTCCAGGTGGCAACGGGC
CGAAAAGATCAACTGCCAAGACCTCGTTGCGCTGGTTCATCACCGGCGTCTGCAATAGAC
CTGGAGGCTTGGTATTAGCAGCCTTATAGCGTTGACAATGGATACATGCCTTTACATAGT
CGGTTATGATTCTTCTCATTCCTGTGAAGTAGAACAGACGTGAGACTTGTTGGTAAGTCC
GGTCAATTCCTGCATGTCCAGCGGTAGGGGCATCGTGAAGCTCTTTGAGAATGTCGGTCA
CTTGATGGGCAGGAATGACTAATTGTGGGGCCTCGGCATCAGAATCCGGATTAAGTCGAT
ATAAAACACCTTGTTCCATTAGAAATCCTCTTTCTGACCATCTTTTAGCAGCAAGTTCAT
CCACTCCTTCCAGTTCTGTGACGATCTTCTGTATTTCCGGATCAGTCAACTGGTCTTGAC
GTAACTGGGTAGGTGACTTGGTGGGCAGGTCGCAAATGACAGAACAGATGCCGCAGTTAT
TTTGTGTTTCGTTGGAACAGATCGGTCTACTTAACGTGTCAGCGACAACGTTAGCTTTTC
CTGGGGTGTACTCGAATCTAATGTCAAATTCTTGGAGTTTAAGCGCCCAACGGACCAACC
TACCAGCAGGAGACTTTAAAGAAAGCAACCAACGCAAGGGTTGGTGGTCACTGCCTATAA
TAATTGGTTGGCCGTCGAGGTATGGCCTGAAACGCTCCACGGCCCAGACTACAGCAAGCG
CTTCCCGTTCTGTAGTAGAGTAGTTGCGCTCCGCTGCGGTGAGTAGGCGGCTAGCATACT
CGATAGGCCTTTCGTCCTTGCCTTCCCCTTGAGCTAAAACTGCGCCAAGTGCATAGTTGC
TCGCGTCGGTACGCAGTACTAAGGGTTGTTTAAAATTCGCTTGAACAAGTACGGGCGCCG
TGGTCAGCAGACGCTTCAATTCTTTGAATGCCTGTGTTTGTTCAGGTCCCCAGCTCCATG
TGTAATTCTTCTTGGTCAGTCGAGTAAGCGGTTCTGCTATCTTTGAAAAGTTTGGAATAA
ACTTCCTGAACCAAGAGCATGTTTGGAG
(3328 bp)

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