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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10540_c3_seq2
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101735409_[Bombyx_mori]
Ontology
GO:0000302 P response to reactive oxygen species
GO:0003756 F protein disulfide isomerase activity
GO:0004656 F procollagen-proline 4-dioxygenase activity
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006457 P protein folding
GO:0009897 C external side of plasma membrane
GO:0016020 C membrane
GO:0016222 C procollagen-proline 4-dioxygenase complex
GO:0016853 F isomerase activity
GO:0018401 P peptidyl-proline hydroxylation to 4-hydroxy-L-proline
GO:0019899 F enzyme binding
GO:0034663 C endoplasmic reticulum chaperone complex
GO:0034976 P response to endoplasmic reticulum stress
GO:0042158 P lipoprotein biosynthetic process
GO:0042470 C melanosome
GO:0044822 F RNA binding
GO:0045454 P cell redox homeostasis
GO:0046598 P positive regulation of viral entry into host cell
GO:0046982 F protein heterodimerization activity
GO:0070062 C extracellular exosome
GO:0071456 P cellular response to hypoxia
GO:1902175 P regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
Transcript
Level		FPKM:50.30 TPM:55.11
ORF EntryO_BomoFB15619_complete:A_BomoFB_comp10540_c3_seq2
Sequence
(Nucleotide)
GTTTCTCGCCGGATCTTCTCAGTGTATCGCGTTTCCGATCCGGCGGTAGATTCTGCGAAG
CATTGCTCTTGCTAGGGCCACTGTTAGCGACGCCTCCTGGTTTTGAGCCCCGAGAGCTCA
CCTACACGTTAAGGTTACGCCGACATAGCCTCTCAAGGCTATCAGCTTAGGAAGGAAAAA
AAACAAACGAGTCTAAAGCAACACGATAACATGGAAACGAACCGCTTTTGTGATCGTGTG
CAGCATTTAAAAATTATAATTAATTATAAAAAATAAAAATGGTAATTAATTGTTACTCAA
GTAATTCATAATAATTCTGAAATACGGCTCTGAGCTTTTCCAAAATTCTTAATCTATTTT
GCCTGAAATTAAACCGTTTTCTCTTTGAAGACTCCATTTAAACGTTAAGATAATAATTAC
AATAATGAAATTCAATGAAGACTAGAAAACTATATGAACATGAAATCCTTACAACAATCA
TAAGTCTTTCAAGATGACATGGCAAAATACAAGATAAAATGCCCACAGGTTTGGGTTTTG
CATCATTCGATATTAAAATTCTAAATATTGGAATCAATTTACAATCAATTAACGATTTGT
ACAGCAGATCCTAAAATCACTATTCCAATATTGAGCCTTCACTCGATCAAATGTTATTGG
TATTTAAGACGATTTTTCGACAAATTTAATTCGGAGTGCATCTACACAATTTAGCCGGCA
GAAGCCATTGTTGAAACAGTCCCTCTGCAGTGTAACGACAACCCTGCTGGGTGCTCGCAG
GGGTTCAAGGGACACGAGGTTATTCGAGAAGCTAGTTATGTTATTACAACAACAATTTTT
CGATGCAAAGTTAGAATGAACTAATTTCTATAGAGCGGTGAAAAGGTTGAGAGGGGACAC
AGACTGGGATTAAGATAACATTCGTGTCCACTTGATGCCTCGCGTGCACAGCCCATTCTT
CCACTGACGTAGACTGTAGCTCTAGTATGGATGTTGTAAGAGAGGTCGCAGTAAGCGTGA
CTATTGTCGATTTTAAGTTCAGTGAAGTAACACAATCCTGATGTCATTTTGATTTTAAAG
GCAATTTTTCCTTATCTCTAGCATCTTGGGTTTCATCGAACTCAATTACAACATCCATGG
TAGCTCTGTCTCTACCACCACCAAATATTGTCCTCTTCCACTACACCTTTTTTCCCTTTA
GAAGGTTTGTCGGGCTTGGCGAGTGCCTTATTTTTCCCTTTAGACGGCTTTTCTTTTTCC
TTTTCCTGCTGTTTGGGTTTTCCCTTTTCTTGTTTCTCCAGTTTCTTGGGTGGCACCTTG
GTCGGCGTGGCCTTGGCTACTTTAGTCGGGCTCTGAACTTTAGTGGGACAGCACTGGTAT
GGTTCGTAAGTCATTTTTGGGACGGCCGGTTTCGCCCCCAATCCAATGTAGAAACAGCGA
TCGCTTTTTTGATCTACAAGCCACTGGAGAACCTTATTTTCGTTCTTTAAGTCACCGTCG
TACATAATCGGAACACCAGTTTCGTAATAAACCAAAGCCGGGAAACTGAATATTCCTATA
TCGGTAGCTAGCTTAGAATCCTTTGACTTTACGAATTGGATGCCGTGCTTGTCAGTGTCG
TCATCAATAGTCTCCAGCTCCACCAGGATGTCGTCGCACGTGTCACAATCTTCACTGTAG
AAGAAAACGGCCAAATGTTCAACATCATTGATTAGGTTCTTAAGAGTCTTCCTGTCGACG
TTTTCAATGATATCCGGTTGTGAATCGTGCAGATCTAAAACCCACTTTAAGATAGCTTCT
TCGTGCATCAAGTCTCCTTCGTAGATGGTCCTGAACTTGTGCCTGTAGAAAGCCAAGGCT
GGTAATTCTGGGAGGTCGTATTCCTTGTCGATGCCGTTGTCTGATGTCTTGACAAAGTCG
ATGTCTTTTTCTTCACACTCGTCGTCAATGTTTTCCAATTCGCTTAGAATCTTTTGAGAC
TTCTTGTCACCTTCTTTGTAGAAGAATACAACGACGTGATCGTTCTCTTCTAGAATCTTT
TCAAGCATTTTAGAATTGACCTCTTCAATTTTGCCAGGAATTTCCAATGTGTTCTCGTCA
GTTAACCACGCCAATACTTCATCTTCGTCTTCGATGTCACCTTTGTAGACTAACGGATCC
TTGTTCCTGAAGAACACGAGGGTCGGGAACGTCTTGATGCCGTACTTCTTGGCTAAGCTG
GTGTCCTCGGTGGTCACGAAGATAATGCCGGTCTCATCAAGCTCGTCGTCGATATTCTCC
AGTTCATCCAAGATGTTGTCGCATTCCTCGCCTTCCTCGCAGTTACCGCTGAAATACACG
ACAACATATTCGTGCTCTTCAATAAGATCGACTAATATCTCATCGGTGACTTCCTCGATG
GTCGCGCTGTTCTTCTGTTCGATCAGCCATTCCAGCACTTCGTCTTCGTTCATGAGGTCG
CCTTCGTATATCGCCGGGATATGCTCCTCGAAGTAGACCAGCGTGGGCAGATGATCTATG
CCGTATTCTTTGGCTTCTGCATCGTTGTCCATACGCACAATAACGATGCCTTCTTTCTCT
AATTCATCGTCGATGTTCTCAAGTTCATTGAGGATCCTGATGTCTTGCTTGTCGTCTTTG
TCATAGAAAATAACCGCCAAATAAGGAGTTGTTTCGATGAGTTTGTCCATCATTTCGTCC
GTGACTTCAGGGATTTCACTGTGCCGTTTCTGATGCAGCAACCATCCAAGAAGCTCTTCT
TCCTTCATCAAATCACCTTCATAAATATGTGGGATACCCTTTTCAAAGAACACCATGGTA
GGGATGGTTTCAATGCCATACTCTTTGGCCTCTTTGTCGTCATCTATTTTCACGAAGGCG
ATGTCATTTTGATCGCATTCATCATCAATGTTCTCCAACTCAACCAGGACCTTTTGGCTT
TTCTTTTGGTCCTTGTCGTAGAACAAGACGGCCACGTACGGCATCTTCTCAATGATGAGG
TCCAGCATCTCGTCGGTGATGTCTTCGATTTCGTCACTCTCGGCTTGATGTTGCAACCAT
TCTAATACTTTTTCCTCTTCTTCAAGGTTTCCTTCGTAGTACGTGGGTATTCCCTTTTCA
AAGTACAAAAGCGTCGGTATCTTTTCGATGCCGTATTCTTTGGCTTCCTCGTCGTTGTCA
ATTTTCACAAACGCAATGCCGAGCTGATCGCATTCGTCATCGATATTTTCCAATTCGTTG
AGCACTTTCTGTGACCTACGATCGTTGTTGTCATAAAACAACACGGCGACAGTTTTCCCG
TCCTTGATGAGCCGGTCCAGCATTTCATCGGTGACATCTTCAATTTCATCCTTCTCTAGT
TGGTCTACAAGCCACTCTAAGATTTCTTCTTCGTTTTCAAGGTCTCCGTCATAAACATTT
GGTATTTGCTTCTCGAAGTAGACTATGGAGGGTAGGTCATCAATGCCGAAAGCTCGCGCC
GCCTTCTGGTCGTCGATCTTGACGAACTGGATCCCGTGACGGTCGCAGTCATCGTCTATC
TTCTCCAACTCATTCAGAACAGTCATTGATTCTTCGTCGCCGTGGTCGTAAAAGAGTACA
ACAAGATGATCGACGTTGATAATCAGAGTATTCAAGGTCTTGGCTGTTACGTCTTCGATG
ACGTCCTCCTCATCGCCGGTAGACTTGTTGGCAATCAGCCACTCCAGCACGTCCTCTTCC
TTGCTCAATTCACCTTCATAGATAATAGGTATTTGATGCCTATAGTAGACCAGTCTTGGC
AGTTCTCCAAGACTGTACTCCTCGGCCAATTCCTCGTCGTGGATCTTCACGAAACCAATC
CCGAGCTGGTCGGCCTCGTCGTCAATGTTCTCCAACTCTTGTAGAGCCTTCGCACATTTC
TTACACTCCGGCTTGTTGTTTGAGGGACCGCAACTTTTGTGATCCGGACAGAAAAGCACT
GCTACATAGTCTGTCTCCTCGATAATTTTCGACAGAATCTTTTGGTTAACCTCTTCTATC
CGGTCAGGAAGGTCCATTGCTTCTAAGCTCGTCAGGAAATCCAGGACACTTTCTTCGTCC
ATGAGATCTCCTTCGTAAATGATCGGTTCCTTCTCACGGAAGTACGTGAGGGCGGGGAAT
TTCGTGATGCCATACTGCTTCGCGAGCCGCTTGTCGTTGATCTTGACGAAGTCCACGCCG
AACGTGTCCGTGTCGTCGTCGATCTTCTCCAACTCATCCAGCACCTTGTCGCACGTCACA
CAGCTCCTTGCGTACCAGTAGACCGCGACGAAGTCCTTTTCGGCCAGTACCCGGTCGAGC
TGCTTGGCTGTGACCTCCTCGATGCGGGGCTCGTGTCGCGGGGGCGGGGGCGCGGGCGCG
GAGGGCGACTTCCTCGCGGCGGCGGCGGCGAGCAGCA
(4417 bp)

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