SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10529_c0_seq3
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		blastopia_polyprotein_[Lasius_niger]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:7.65 TPM:8.38
ORF EntryO_BomoFB15462_complete:A_BomoFB_comp10529_c0_seq3
Sequence
(Nucleotide)
CCTGCATCCCACATTTTGGGGGCTCGTCCGGGATCGGCCAAAAGAAAAGGCAAGTAATAA
TAATTGTTTCGACGCCATTACGAGAAACAAACAACGCGTCAATTGTACGAATATACACAC
GACGTATTTAAATCTTCATTGTGTACGACGATCACAAAAGATTAATACACGAGGATGGCA
AGACGACGATCAAAAAGCCAGTCCTTCGATGACGACGACAGTATTTTCGATCGACCAACG
CGTGGTGGAATGTTTCACTTAACGGAGAATATCATCAGGAAGTTTGACGGCAAAGACAAA
ACTTATGCTGTAACAAAGTGGATACAAGATATAGAGGAAAATGGTGACATATTCGAGTGG
ACACCAAAGCAACGGTTATTAGTGGCTCGACGGTCATTAACCGGCACGGCAGCTTTGTGG
TTAAATTCTGAAAAAACGTTTCCATGCTGGGATACTTTAAAGATAGCCATCAGTAAGGAG
TTCCCTGACACCATAGACGCCAAGACTATTCACGAAATGATGAGTGCTAAAAAGAAAAAG
TCAAATGAATCATGCATTGACTACATGTTTGCCATGAAAGAGCTTGGACGCCGAGGCAAA
ATGGCGGACTACGTGGCTATAAAATATGTTGTAGATGGCATACAAGATCAAGAAATAAAT
AAAATAATGCTATATGGAGTCACAACGTACGCTGAATTAAAGGAGAAATTAAAAATATAC
GAGATTTTGAAAGAAAAAATGAAGAAAGAACCTATTCACGGAAAAGAGCAGAAAATTACT
AATACAAGAGAATGGTCATCAAAAGTTCGATGTTATAGCTGTGGAGAAAAGAGTCATAAA
AGTGAAGATTGCCCGAAAAAGATGCAAGGAAAAAAGTGTTTCAACTGCAACGTGTTCGGC
CATATTTCTTCACAATGTCCGGCAAAGGCGGAAGCGTCATCGGCTACGGCTAGCAGCGCG
AGAACAGAGCAGCAACCGAAACGCACGTATATCGCTACGACGCAGGAGGGCGCGAACACA
ATTTTCGAAAATCAATCTAACGAAGTTCACAACGCTATGAATGCTGTGATTGGCTCTGCG
AACAGTACGGTGCGCGACAAATGTCATAACAGTGAGGTTGACATTTTAAAAGTAAATAAA
GAATGTAAAGTGTTGAAAAAAACTTTGAAATTAGTAAAATTGTGTAATAATAACGAAATT
CATGCATTAATTGATACTGGTAGTGAAGTTAATTTAGTAACCATGGACTATTATGAGCAA
ATAGGCTCTCCGACGTGTTTTAAAAATGTAAACACAGTTCTTACCGGTTTAGGCTCATCA
AAGGTAATATCAAGTGAACAATTTAAAACAAACATTGAAATCGACGGCTACACGTATCGT
GATATAATATTTTATGTGATTCCTAGAGACAGTATACCTATTAAAGTGATATTGGGACAT
GAATTTTTAAGAAATGTTATTACAGTTATGAAAGATGGTTTGGTATGGATGAAACCAAAT
GATTGGTTGTTTAAGGTAAATTGTTTTCCATGTTCTATTGACATTGTAGGTCATGTTATG
AATGAAAATGTGAGGAATGAAGTGACTAGGTTAGTAGATGAATATCGGCCATGTCAAACT
AAAGAGGCTCCCATTGAGTTGAAAATCACACTTAAAGACGACATCCCAGTGGCTCAACGA
CCACGACGCATCTCACCAAAAGAACAGGATGAGGTAGATAAACAGGTTAAGGAGTGGCTG
GAACAAGGAGTTATTCGGGTAAGCTTTTCTGAATATACTAGCCCAATTGTTCTTGTCAGA
AAGGATAAGCAGTTTGAATTTAACAATGAACATAGATTAGTTTTCAATATGCTTAAGGAA
AAGTTGACCAGTAAACCTGTATTGAAAATTTATGAACCAAAAGCAGAAACAGAACTTCAT
ACAGATGCCTCAAGTATAGCATATGCGGCTATATTATTACAGAAAGATGACAACAGTGAA
CTACATCCAGTACATTATATGAGCAAGCGAACAACTGACGCTGAGAGTAAATATACAAGT
TATGAGCTAGAAGCTTTGGCTATAATAGAAGGTATAAAGAAGTTTAGACATTATTTATAC
GGAAAGCATTTTAAGATAGTTACAGACTGCAAAGCTTTTCAAATGACACTGAATAAAAAA
GATCTAGCAATGAGTACGAGAGTGGCACGATGGATATTGTTCTTACAAGATTATGATTTC
ACTATTGAACATCGTGAAGGTTCGAAGATGAAACACACAGATGCTCTAAGCCGAAACCCA
TATGTAGCTCTTATATTTTCAGACCTACATAGTGATTTAAGACGTGCGCAAGAGAGTGAC
AACGGATTAAATGCAATTATGAATATTCTGAGAGATGGTAAACTATATAATGACTTTTAT
TTGCAAGGAGGATTACTCTGCAAGGGACCACAACATTGTTTGGTTGTACCACAGAAGATG
GAAATTGAAATTATTAAGAGGGCGCATGATAATGGTCATTTTTCAAAGAAGAAAACAATG
GAATTGATTAATAAGGATTATTACATACCAAAATTAGAGAAAAAGATTGAGGATTATATT
GCTACATGCATACCTTGTCTGTTAGCATCCCGTAAAGAAGGTAAACGAGAAGGATTTTTG
AATCCCATAGAAAAGGGTGACACACCATTACATACACTTCACCTGGACCACATTGGACCA
CTTACGGAGACACGTAAGCAATATAATTACATATTGACTATTGTTGACGCATTCACCAAG
TTTGTATGGTTGTTCCCTACAAAGAGTACATCTACCCAAGAAGTGTTAAATAAGCTGGAA
ATACATCAACAAGTATTTGGTAATCCTATAAGAATTATTTCAGATAGAGGGACTGCATTT
ACGAGTAACGATTTTGCACAGTACTGTAAAGAGGAAGAAATAGAGCATGTAAAAATAACA
ACAGGGGTTCCCAGAGGAAACGGTCAGGTTGAAAGGGTTCATAGAACAATAATTTCAGTA
CTGACAAAACTTTCAGTTGAGAAACCTACATTGTGGTATAAGTTGGTAAGCAGAGTTCAA
AGAGCACTCAACAGTACTTACCACAGGAGTATAAATAGTACCCCATTTCAATTACTCTTT
GGAATAAAAATGAAGAGGAAAGAAGATATTCAATTACTGGACCTTTTGATGGAAGAAGAA
AGACACAATTTCATTGACAGTAGAGAAGAACTTAGGAAGGAAGCGAAGAAACAAATATTT
AAAGTACAAGAAGAAAATAGAAGAAATTACAACAAGAAAATGAAAGAATGTACTATATAC
AAGGAAGGCGACTTAGTAGCTGTGAAAAGGACTCAGTTTGGTACAGGAATGAAACTGAAA
CCAAAGTTTTTGGGACCATATCGAATAGTAAAGGTCAAAAGAAAGAATAGATACAATGTT
GAGAAGGCTGACGCACAAGTTGAAGGCCCTAACAAGACTACTACATCTGCTGATTTTATG
AAAAAGTGGCCTGATTACTTAAGTGACTGAATAAACAGAAAGGATGAGTTCAAGATTGGT
AGTATGAAAGGATGAGTGAATTATATTGTTAACCCTAGTTATAGTTCTATTATGTTACAT
TTATTAGCATACGATGTTCTAATATCCTTTTATCATAAGATGAGTTTTGTTTTTTTTTAA
GTTAGTTTTGTTGTAATATGTTCAGTCTTTAGTCATATGATGTTAATGTAATAGTTGTTA
ATTGTTTTGTTTAAGAATGATTTATAACTTTTTGTATAACTTTCTCTATGTTGTAAGATG
TTAGTGTTATAAAAAGGTAACTCTGAGGACAGACTTACGTGCAGGACGGCCGAATGTGGG
AATGATGTTTTATTGAACGCATGATATGATGGATGCAAGTTGATGTTTGTGAACGCAGTG
GTGTATCAAGAATGGAAGGGGATGACGTGTGAGATGACAGAATGACAGATGGATGAACGA
CGACGAACGAAGCACGAGCACGACGGAACGATTAAAATTTATATTAACAGTATTGAAATA
AAACGTGGAAGTAGTAAACGCGAAACTTTTATTAATTGTCTGAAGGCTGCATCCCACATA
CATAAGTCAAGGTCTCAATCGTATTGTATGAGGGTGTTCCCTTTCAAATCGATATGCGTG
ACGGTTTGGTAACAGAAATGAGCTGGATGGTAGTACCAACTCGTGCGTGGTCATAACGGG
CCCTACCTACAAGAACTGCTCAACTCTTTCATTCTTATACACTATGTTATTCCTTCATCG
TTGTTCTGTAGTCATACCCGATCCTGTGGACCGAATAGTAAACAGTCAACGTCGACCTAA
ACACGTCATTTCTGATCCTCCCGATCCATTAACTGTGCTTTTAGATACCTCAAGCATCGG
CCACAGTCCTCGCCGAACCCGGCGCTTGTGACGAGGGGCTTGCTGAGTAAACTAACCCGT
AGACACAGCCCACTGAATTTCTCGCCGGATCTTCTCAGTG
(4480 bp)

- SilkBase 1999-2023 -