SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10526_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		Gag-Pol_polyprotein_[Medicago_truncatula]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:3.99 TPM:4.37
ORF EntryO_BomoFB14927_complete:A_BomoFB_comp10526_c0_seq1
Sequence
(Nucleotide)
TAAATACTTGAAAACATTGTGTTGACTTGTATAAGAGAAAATATAATTCAGAATGACACC
GCACATCAAAAGTAAAAAGGAACATAATACAAATTTAAATATAGTGCAGCATAGACAATT
ATACGTGGACAGCATCACGACCTTCCAACACCTTCTCCTGATGTTCACTCATGTTGCCGA
GACACGTTTCTATACATGCATTAATCTTGCACAGTGTCTTTCAAATTTTACTTTTGACAA
TGGTTTTGTCATTACGTCAGCTAACTGAATTTCTGTGGGACAGTAGCTAATATTTATTAA
TCCATGCACGAAGTGTTCATGTATAAAATGGTACCGCACGTCTATGTGCTTCGACCTTTT
GTTGAAGGATCCAGACTTCACAAGTTGAATCGAACTTTGGTTATCAACATGTAGATTTAT
TTTTATGTCCATACCGGTTATTTCCTGTAATAGAGATTTGAGATACAATGCCTCTTTGCA
ACAGTCGGCTGCGGCTATGTACTCGGCTTCGGTCGACGATAGCGCTACTATAGGCTGCCT
CTTGGATGCCCATGATATTGGTCCATCGGCTATCATTAGCACGGAACCAGAAGTGCTTCT
TCGCGTCAATGGGTCTCCAGCATAATCCGAGTCGCTGTAAGCATCGATGCTCTCTATCGG
TTTGTTTCGTTTGAATAAAATGCCTTTATGTTTGGTTCCCACTAAATATTTGAATATTTT
CTTCAATTTTGTAACGTCTTCTCTAGTGGGGTTTTCGACCTTCCTGCTAACTAGATTGAC
CGCTTGTGCGATATCTGGTCTGGTTCTGGTAGACAGGTACAGTAAACTTCCCACTGCTTC
CCTATAGGGATATTCCTTCTCCTGGGCAGTTTCCTGTATCGACTTTGAATCGCTACTTGC
GGGCGTGTCACAAGGTTTGGCATTTTTCATGTTGTATTTTTCCAGTACGTCATTTATGTA
GGATCTCTGAGTAAGAATGATTCCTTCTTTTGAGTTTTTTATTTCCATACCCAGATAAGT
ACTTGGATTTTCATTCTTTTTCATTTGAAATTTGGTTTCAAGTTTCTTCAAAATAGCTTC
GATCTTTTTCTTATCTTTTCCTATGACAAGTCCATCATCAACGAATAGTCCGATTATTAT
TGATTTATCTTCGTTTATGAAAACGCATCGATCTGTTTTGATTGTCTTGAATCCCAAATC
AAACATCGCTTGGGTAAAAGTTTTGTTCCATGTAAATGGAGCTTGTTTTAATCCGTACAA
AGATTTTTTTAATCGGCAAACTACTTCAGTAGTATTGCAGTTAGTCTCATAGCCAACAGG
CAATTTCATATAAACTTCATCTGATAACTCTCCGTATAAGAAAGCTGTCTTGATGTCAAA
TGTCATGAAGTAGTAAGATTTAGATGCGGCAATTGCTAATAAAGTTTTTAATGCAGATTG
ACTTACTACTGGGCTATAAATGTCTTCGAAATCCAGGTTTCCTTTCTGCTCGCATCCACG
TACGACTAATCTAGCCTTGTACGTACCGTCATCTTTAATCCGAAATACCCATTTGTTCGA
CAGTATTTTGTGTCCTTTGGCTTCTGACTTGTCTACTAATACCCAGGTGTTATTTTTCTG
TAATGATTCCATTTCAGATTGTATCGCCTTCTCCCAATTTCGTCTGTCGGTGCCAGTCAC
AGCTTCTTTGTATGTTAGTAAAGAGCAGTCATAGTCGTCATTATTTTCTGACGTAAACAT
GGTCACGCAGCGACTTAACTCATAATCTTTGGTCCATGCTGGTGGTCTCACGTCCCTTTG
TGGTCTTCCACTTGAGGGAGATGGTTCATCAACATGATCTTGACTAGAGCTGGAATAAAG
GGGGTTAGGTTCCTGAAAAGGTAAGTTCTCATTAATGTTGTTTCTTTTTTCTGGAATTTC
AATTTGTTCTGTTTCAGGTTCTGGAGTAAGACCTTCGCGTTTCTCAGCAGGAGTACCGCT
ATAATGCATCTTTTCGACTACTTTTACATCTCTGCTGATAACAACATCATTCCTTTCGGG
TATATATATTCTAAAACCTTTTGTATATTCCGCATATCCCAAGAATACTCCTTCTGTCGA
TTTGGCTGTGAATTTTCCTCTTCGGTTTTTGTTCATCACAAACGCTCTATTTCCGAATAC
GTGTAGGTGATTTCCTGAGGGTGTTCGTTGTACCCATTTCTCATATGGGGAATTGCCTTT
GAGAGCTCTTGCTGGGCTTCTATTTATTAAATAGTTTGCAGTGTTTACTGCTTCTGCCCA
AAGTTTTGCAGGAATATTGGCATCTATCATCAGACATCTAGCTTTATCCATCAGCGACCG
ATTTTTTTCTTTCACTCATGCCGTTTTGCTGGGGGGTATAAGGTGCAGATAGTCTTCGGC
TTATACCGTTATCTTTGAGGAATTTATCAAACGCTTTAGACCTGTATTCGCCTCCATTAT
CAGTTTGTAGATTTTGAATTTTCTTCTTATGAAACAGTTCAACAAAGTTTTTATATTCCT
TGAATTTATCGATTACTTCGCTCTTTTCTTTTAAGAAATATACACAGCAGTATCTTGTAT
AATCGTCAATAAATGTTACGAAATACTTTGATCCGGCCATTGATTCGTTCTCAAATGGGC
CACACACGTCACTGTGAATTATCTGGAGCACTTCGGTAGAGATTATTTGTCCATGGCTTT
GGAATGGTAGAGTGGAAAATTTTCCTTTGATACAAGTCTCACAGGTACCCAAAGTTTTTT
CTTTAAAGTCGAGTCCTCGCATCATTTTATTTTTAACCATTTCTTTTAGGTCTCTTTCAT
TGATGTGACCTAATTTCTTGTGCCATTTCATAATTTCGCTTTCATCACTAGGTGCGAAGT
TTGCTGTCTCTTCCGGTTTATCAAATTCAAGATAGTATAATCCATTTCTTCTGTTAGCTT
TTAATACAGTTTTTCCGCCTTTTATGACACTGGCTTGTTCTTTTTCAAATAGAACCTTAT
AGCCATGATCCGTAATTTTGCTTGCAGAAATTAGATTATTCGATAAATCAGGTACATATA
ATGTGTCAGAAAGACTAATTTTATAGCGTCGATCCTTTGTATAAAGTTCGGCTTTTCCTT
TCCCTTTAACTTTGGTCGTATGTTTATCTGAAGCTAGCTTTAGAGTGTCAGTCGCGGGGA
TTAAATTATGAAGTATACTTTTATCACCCGTCATATGTGACGTACAGCCACTGTCAAGAT
ACCATAAATTGCCTTTACATTTCGATGTTCCTGTTGTTAAACAGATGTTAAATGTCTTTT
CTTGACCTTTAGTTTTATTGGGGTTATTGGGTTTCTTCTTTGACCAACAAGCTTCTGTGG
AATGCCCTTTCTTATTGCAATCCTTACAAAATTGTACCTTTTTCTTCGTCTTTGTGTAGA
AAGCTTCTGAAGCCTGAGGTTCACTATCTTCGGTTTGCCTTCTTGCTTCGTATTCTTCTA
CGAATTTTATTTTTAAACTGTCAGGACTTGGTAGAACATCTCTCGACTCAATTGCCGTTC
GGAAGCTATCGAAATTTGTAGGTAAACTGTACAACATCATTATACTTAATAACTCTGGAT
GAATTTTGACATCCATGTCTTCTAATTTACCTACTACATCCATAAAATTACTGAGATGGT
CTCTCACATCTTCTTGTGGAGTCATTTTCTTTAATACTAGCTGCTTTAACAACGTAGCCT
TTCTTGCCGGCCCTGAACTTTGGTGAATAGACTTAAGTTTGTCCCATACCTCCTTGGATG
TATTACACCCTTTAACTTGTTTCAGTTCTGGTGGAGATATAAGTAAAATTAGCTCTGACC
TTGCCTTTAAGTCTTCCTTTAGGAACGCACTCTTTTCTTCGGCAGTCGTAGTTGCCGCTA
TCGCTTTTGCACCACTAGCGTATTCCCACAAATCGTATCTTACGAGAATCGCCTGTGCTT
GTAAGCACCAGGTATCATAGTTTGATTTTGTCAGCGATTCTATGTTTCTGATACTCGAGC
TCATTTTAAATTTTTTTATTTTCTCATTTACTTACTATTTTAAATTTTAATATGCTTCTT
CCATTTGCCACTAGATATTTATCGCAACCACGCTCTGCTACCACTGATAGGGTGGACTAG
CGGCCATAGC
(4150 bp)

- SilkBase 1999-2023 -