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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10518_c0_seq23
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106119215_[Papilio_xuthus]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005604 C basement membrane
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005882 C intermediate filament
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007010 P cytoskeleton organization
GO:0007050 P regulation of cell cycle
GO:0007155 P cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0008022 F protein C-terminus binding
GO:0008092 F cytoskeletal protein binding
GO:0009611 P response to wounding
GO:0009925 C basal plasma membrane
GO:0015629 C actin cytoskeleton
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0030011 P maintenance of cell polarity
GO:0030018 C Z disc
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030424 C axon
GO:0031252 C cell leading edge
GO:0031581 P hemidesmosome assembly
GO:0031673 C H zone
GO:0035371 C microtubule plus-end
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045104 P intermediate filament cytoskeleton organization
GO:0045111 C intermediate filament cytoskeleton
GO:0046872 F metal ion binding
GO:0048870 P cell motility
GO:0051010 F microtubule plus-end binding
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.89 TPM:0.97
ORF EntryO_BomoFB14818_complete:A_BomoFB_comp10518_c0_seq23
Sequence
(Nucleotide)
CCGGCGTGCCGGACTCCGACGCGTCCGACGGCTTGCGCAGTAGACGAGACACCGCGGTCT
GCTGTCCCGACCGCACCGGCGTCGTGCTGCCCGATGGGGTCCTTTGTCTCGCTAGGGGCG
GCACGACCATCAGTGTCGGTATACTTGAGGTGCGATACATCCCTCCGCTAGAATACCTTC
CACTAGCCGGCGTCAGGTAACCGGTCGGCGTCCGAGGACGGGAGCCGTTCGGCGTGCTAA
CCCCAAGCTTGCTTGCATTGGCGGCAGCACGCGCGATCGAAGTCTTCGTATTCGTGACTT
TCCTCATGGGAATGCGGGACGGCGTTGTCGCATCGTCTGTACTATCCAAGGATAAATTTG
ATCCATGTCTCGAAGGGGGTTTTGATCCTGCCCTCGATCCAGCTCGAGAACCGGGTCGAG
ATGTTCCCGGTGTCAAAGTGGACCTCGGAACGCTGGGCTTCCTGTATCTTGTTCCAAGTC
CGCTCGCCGCTTCGTTATCACTGAGCGAGTCTGGTGTTCCTGCACTCAACGAAGATCTGG
AAGCGCGACCGGCCGCTCCCGCTCCAGCGGACATAGGCACCGATCGAGCTGTTCTTTCCC
TCACCTTCGTGATGGGTCCGGTTGATGGAGGAGTATTTGTGTTAGAGCGAGGCGTACGCG
GCCTGAACGCTGCCATGCTCTGGGATACACCGTCAGCCAAAATAAACTGTTCCCGCAGTT
CGATGTTGGTGCGTCCCTTGGCTCTGCAGGGATCGTTCTTCACGAGGAACTCGTCGAGCG
CCACCCAGCCCCCTCCGACCCTCACCATGACGGTGGAGCGGAGGATACGGACTAGACGCT
GTTTCTGGGAGTCCCCGAACCTGTATTTCCCTTCTCCGACCTGGAACACGCGGAACTTCT
GTCGGCACGTGCACAGCATCACGAGTCGCTTCACCTCGTCGTGAATTTTGTCCGCATCGG
TCGGGGGTCCGCGGCGTTCCACCCAGTCAGGGCGAAGCGCCGCAATGAACTCCTCCCAGT
CGATGAGGCCGCTACCGTTCCTGTCGAACAGATCCGCCACGGCGCCCATCTCCAGCCGGG
ATGTGTCGAATTTGGTGTTGACGATGCCATCGATGAACTCGTTCCTCGGTATCAGCCCGT
TGTTGTCCTTGTCCATTTTACGGAACAGATCTGTCAGGCGGGACTTCTTGTGGTTCATGA
ACTTGAGGAACCTCTTCCTCCAGTCGTCCCAGCTGAAGTTGGAGACGCGCTGAAGTTCCT
TGAGATGGGCGAGGCGCTCGTGCAGCCTCCGCTGGCGCTCCCAGGCGAGCAGCCACACGT
TGCGCCACCTGTCCCACAGCTGCTTCACGCGGGGCGACCTGAACTCCGGTTCTGCGCCTT
TGCTTCCCTTCGGCGGGAATCGGGGTCCGTAGTGGGGCAGGTTCCGATCTGGCGTCTCCC
GTCCAGGGCTGATACGACTGAATCTTCTAGATCCGTAGTAGTCGGGCGAGACCGAGCGGT
CCCGGTGCAGGTCGTGCTGGGAGCCGCGCCCAGGAGTTCCTTTCGTGGCGCTCTTCGCTG
ATACCTTCCTTGGCGTAGATTCCCTTCCTTGGGTTTGACTCTTGACCTGGTACGCTTTGC
AGACGCGGTCTACTTCGTTCTGTCTCTTCTGAGTGTGCTCCATCAGTTCTTTGTGGTCTT
CTATCAAGCCCTCGAGAAGCTCTATGGATTCAGGCAGCGGCTCAGTCTCCATTGATAGCA
AGTTGTTCTCGAGTCCGGTGAGCCACTGCAGCAACTCCTCGAGCACGAGGTCCAGGTCTC
TGAGGCTCTGCATGTGCGCGTCCAGCTTGCCGCCCCGCTGCATGGCCCATTGCCATACCT
CGTCCCAGCGGCTCTGTATGATGGTGATCCAGTGCTTGATGACGGTGACGGCGTCGGTGT
GCGCCTTGCTCAGGATAGAGTGAGCCAGCGTGATGGTCTCGTCCTTGTCCTGCTTCTTCT
CGTTGAGTTCGCGCACGAAGCGCTCGTGGTCCCGTATCTGCTGCTGCGTCTCCTCGTCGC
CTTCGGGGAGCTGGCCCGAGAAGCGAAGCTTGGTCTCCGCGTCCGATAGCCACTCCAGGA
GCATGTTCACAGAGCGATGCAGCTTTTCCGCCTCTTTGAGTGCGCCCTCCAACTTGTGCG
CTTTCCTCTCGCTGAGGATGAGTACACTGTCCCACAGTTGCTTCAGTTCGCTGCCTTGTT
GGCGGATGTTGGCGGCGTCTTCCAGTGGCACGGTGGCCTCCAGGTCCCGGCCGGTCTTGG
TGACGGACTGCATCTGCTGCTCGCGCGAATGCAGGTCCTCTTCGAATTGTTTATGTTGTT
CGATCAGCGCCATCACGGTGTCCAGGTCGCCGTGCACAGGCGCGTCTCCTTCCAGAAGCT
TCTGTTGCTTTTTGAGCCAGTCCAGCAGCGCCGACATGGCGTCTTTGAACTGTCCCGAGT
ACAGCAGCGCCTCTTCCAGTTTCCGTTGCCTGTCAACAGCCTTAGAGCACACGGTTGTCC
ATTTCGTCTTCATATCCGTTATCATTGTCTTCAGCGGGTTCTCGTCGCCCTTGGGAGCCT
TGTCCTTGAGATGCTTGCCGGTCTTCATAGTGAGGTCGTAGGCTGGCTGTTTGGAAGCCA
GAGCCTTTTGGAACTCGCGGTGTTTGTTTAATCTCTGTTTGATCTTATCAGGGTCGTTGA
CCGTCGCCTCCGAGTTCAGTTGGTCCAGCTGCTCCTCGGTCTCGTTCAGCCAATTCATCA
GGTTGTTCCACATGTCACTGAACTCCTTAGCCTCTTTGAAGCCATGGTCGAGGGCCCTGG
TCCTTTCGGCAGACTTGGAGACGACCCTCTCCCAGCGATGCTGTACGGAGACCAGCAAGT
TCTTAATGAGGATCACGTCCTGCTTCTGGCTGAAGTACTTGAGGTGTGTTCCCTTCTTGT
CCAACTGCAGCATGGTCTCCCGGTGCGTGGACACCTCCTTTTGGAAGCTCTTGTGCTCTT
CGATTTGGGTGAGCAAGGTTTCCATGACCCTGGAGACCGGCTTGGCGGAGGTGAGGGTCT
TCTCCGCGGCGGTGAGCCAGTCCACGAAGGCCTGCAGCGCGTCGTGGAACTCCGTCGCCT
CCTTCAGAGCTATCTCCAACTTGATCTTCTTGTCTGATGCTCTGGCAGTGACATTATCCC
ATCGGGACTTCAAGGTCTTGAGGCTGTGGTTGAGCTGCGAGGTCGGGTTGGGTTTCTCCT
GCCGCTTGATGTACTCCTGTCCCTGCTGCAGCACGGCTTCGACTTTGGGACGGTTCTCTT
CTATTTCACTGTACACCTCCATGAACCTCTCCAGCTGCTCGGAGGCGGTCTCCGGGAGCC
CCCCGACGGGCTTGGAGGCCGCGATGACGCCGTCCACTTCGGACAGCCACGACAGCAGGT
CACCGATTTCCGCATTGAAACTCTGTGCTTCTCTGAGCGCGTCCTCGAGCTCAGTTTGTC
TGTCTCTTGCTTTTTGTTGTAGTTCGCGCCATTTTTTGTTTAGTGTTGCCAGTTTTTCGG
CCGTCTCGCCCGCTTCTTCGGTACCGTGGTGCACGATCTGCGCGCCGGCGTCGTTGAGCG
TGTCGACGCTGGCCTGGTGCGCCGCTATGTCGTTCACCAGCACCTTCAGCTTGGCCAGCT
CCACCTCCAGCACCTGGGGGTCACCTGCCACCGGTTTCAACGTGTCCAAAGTGTCTGTGG
TGTTCTGTATCCACGCGAGGAGCTCCTGCAGGGCGTGCTGGAGCTGCCCGAGTCTCAGCA
GCGCCTTCTCCAGTTGCTGCTGGCGCTCCACCATGCCGCGGAGCAAGGCCGACCAGCGAG
CGTTGACCTCCGTCAGGGGCTGCTTGATGGCGGCCGCTTGCTCTGACGACGTTCTCTCTG
TCAGCTCCTGGGCTTGCCTGTTCAAAGCTTCGACCTTCACCATGTGAGGGTCGACCTCCT
GCTTGAAGGAGGCTAGCTGAGCGATCTGACGCTTCACGGCGTCGATGTCCGAGCCGAGCG
GACCCATGCGCGAAAACTTGTCTTCCGCCGTGTCCAGGAAGTCTTGGAGATTCTGCAAAG
TGTCATGGAATTCCATCGCCTTTTCCATAGCATCGATGAGATTCTCCTCTCGTCTGGCGT
AGAGTGCTGTGATGTTGTCCCATGCGTTGTCTAGGTCCTCCATGTGTTTCTTGACCTCTG
GCTTGTCGGGTTCCCCGCAGAGAGACATGAGAGTGGAACCGGTCTTCCGTACTTTCTCCA
CCTCGGGCTTGGTGTGGTCGATCTCGTGGCGGATCTCCTGCAGCGCGAGCTGCTGCTGCT
GGATGGCGGGCGGGTGCGCGGCGGGCGGCGGCTGCGCG
(4358 bp)

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