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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10512_c0_seq1
Scaffold_idBomo_Chr27
NCBI non-redundant
(nr)		PREDICTED:_lysine-specific_demethylase_lid_isoform_X1_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0032453 F histone H3-methyl-lysine-4 demethylase activity
GO:0032922 P circadian regulation of gene expression
GO:0034647 F histone H3-tri/di/monomethyl-lysine-4 demethylase activity
GO:0034720 P histone H3-K4 demethylation
GO:0034721 P histone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0043970 P histone H3-K9 acetylation
GO:0043992 F histone acetyltransferase activity (H3-K9 specific)
GO:0045475 P locomotor rhythm
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070822 C Sin3-type complex
Transcript
Level		FPKM:0.74 TPM:0.81
ORF EntryO_BomoFB14660_complete:A_BomoFB_comp10512_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTTCGAAAGTTCAATTTTGCATGGCGGACGTGCAATTGGATTGTGTTATTTGT
TGGTGATCATTTTAATAATTTATCTCTTGTAGATTCCTTATGGAAAGACTACTTTTAATA
ATTTTATTCCTTTGTGGTCGTGCTTTATTCATACCTTAACGATAGATGATGCTAAAGTGT
TATTTATAGTTGCATTTTGTGAGAACTGCATAGTGTATCTCGAAAATGGGAAAATGTGAC
GAAGCTAATGTCGAAGTTAGCATGGGGGACTCAGCGTCCCCCATGAAACCTGATAACTTT
ACGTTTACTCCACCTCCAGAGGCTCCTGTCTTTGAGCCTACACCAGAAGAGTTTTTGGAC
CCTTTAGCGTACATCAGTAAAATACGTCCTATCGCCGAGAAATCGGGCATTTGCAAGATA
AAACCACCAGCGCACTGGCAACCCCCATTCGCAGTTGATGTGGACCGACTACGGTTTACA
CCGCGAATACAACGGTTAAATGAGCTCGAGGCAATAACGAGGGTGAAGCTTAACTTCTTA
GACCAGATTATAAAGTTTTGGGAACTGCAAGGGTCAACGTTCAAGATTCCGACTGTCGAA
AGGAAACCGCTCGATCTCTATTCGTTGCATAAGATTGTGAAAGAAGCCGGTGGCTTCGAA
ATATGTTCAGCAGAGAGGAAATGGTCGAAGATAGCCCGCCGCATGGGCTACCCGCAAGGC
AAAGGCGTCGGTTCAATATTGAAGAATCACTACGAACGCATCCTGTATCCTTATGACGTG
TTCAAGAACAATGGAGCAGTCGGAGACAATAAGGAGACAAAAATCGAAGTCAAATCAGAA
CAGACCCCCGAGAAGGCAACGGCGACACGCAGTCGTTCAACGACCAAATGTCCCCCCGGG
GCCGCGGCCACCCCGCCTCCCGCCCGTCGGTACAAGTCCGAGCCCGAGCCGGCAGCTGAA
GGTAGTCACACCGAAGGCGCCCTCGTCGGATCTGAAGATTCGATTATGAAAACTCCCATT
AAAGAGGAGAACCCCGAAATAAGACGGACAAGTCCTCGTGAGAACAAATGGATGTCGGCG
GGAGCCAGTTGCGGTTCGCGAGCGCGCGTGACCCGCTCCACCCGTCTCCGCGAGCATCGC
GTCAACAACATGACGGTCTCCGTGACGCCTGCCCCGCCCGCACCCAACACGCATCCCGAT
GATCCGTTGGCGAAGTACATGTGTCACGTGTGCGGCCGGGGCGACGTCGAGGAGCAGATG
CTGCTGTGCGACGGCTGCGACGACTCGTACCACACGTTCTGTCTCGTGCCGCCGCTCGCG
GACGTGCCCAAGGGCGACTGGAGGTGTCCAGTGTGCTTAGCCGAAGAGGTATCGAAGCCG
ACTGAAGCTTTTGGTTTCGAGCAGGCCACCCGCGAGTACACGCTGCAACAGTTCGGCGAG
ATGGCGGATCAGTTTAAATCAGATTACTTCAACATGCCCGTGCACATGGTTCCAACGTCG
ACCGTGGAAAAGGAATTTTGGCGCATCGTATCGTCGATAGACGAAGATGTCACGGTCGAG
TACGGAGCGGACCTTCACTCGATGGACCACGGCTCGGGGTTCCCGACCAAGTCCAGCGCC
CACCTGTACCCTGGGGAGCAGCAGTACGCAGACTCCAGCTGGAACTTGAACAATCTACCG
GTTCTGGAGGGTTCTGTGCTTGGACATATCAACGCTGATATCTCAGGAATGAAGATACCT
TGGCTGTACGTGGGCATGTGCTTCGCAACGTTCTGTTGGCACAACGAGGACCACTGGAGC
TACTCCATCAATTATTTACATTGGGGAGAACCTAAGACATGGTACGGAGTGCCAAGTTCA
AAGGCCGAGCAATTTGAAGCCGCAATGAAGGCGGAAGCTCCAGAGCTGTTCCAGCTGCAA
CCGGACCTGCTGCACCAGCTTGTCACGATCATGAACCCTAATGTGCTGATGAAAGCTGGT
GTTCCCGTTTACAGAATGGATCAGCACGCTGGAGAATTCGTGATTACGTTTCCTCGCGCT
TATCATGCCGGCTTCAACCAAGGCTATAATTTTGCCGAAGCGGTCAACTTTACACCAGCT
GATTGGTTGAAAGTGGGCCGCGAATGCATCGCGCACTACTCCACGTTGCGGCGCTACTGC
GTGTTCTCGCACGACGAGCTGGTCTGCAAGATGGCGCTGGAGGCCGACTCGCTCAGCCTC
AGCGTCGCGCTGGCCGCCTACCGGGACATGCGCACCATGCTGCACGACGAACGGAAACTC
CGGAAGGGACTGCTGGATTGGGGTGTAACGGAAGCGGAACGCGAGGCCTTCGAGCTGCTA
CCAGACGATGAGCGGCAATGTCACATGTGCAAGACGACGTGCTTTCTGTCGTGCGTGACG
TGTCGCTGCACGCCCGCCGTCGCCTGCCTGCGACACTACGTCGAGCTGTGCAACTGCAGC
CCGCAGGCGCACAGGCTCAGATACCGTTACACCTTAGATGAATTGCCAGCGATGCTGGAG
AAACTAAAGAAGAAATCGGAACAGTTCAGGGAGTGGGCTGAAGCTGTGCAGAATGCTCTA
GATCCAGATACGCCTAAGACTTGTGATTTAGACGGACTGAGGGCGCATTTGAAGAAAGCT
CACGAACTTAAGATTCACAAGACCGAGCTAGTTCGTGCTTTAGAAACGGCTATAGAAGAC
GCCGAAAAGTGTGCTTCGGTAATACAGCAACTGGACTTGAACAAGATGCGGACTCGAACC
CGACACCACGACCCCAAATACAGGCTGACCATACACGAGCTCACTTTGTTCGCGGCAGAA
ATTGACGGCCTCGCTTGTGTTTTGCCCGAAGGCTCGGCTGTCAAAGAAGTCTTACGTCAA
ACGTCAGAGTTTGAGTCGAAAGCATCGGAATTGATCAACAAAGACCTGGACAAGATTGAA
CCTGGCTACGTTAGGGAATTAGAAGAGGTTGTAGATTTAGGATCTCGGCTCTGTATAGTG
CTGCCGCAACTGGCGCCCCTGCAGGCGCGGCTCCAGCAAGTGAAGTTTGTCGATGAAGTG
CAGCAATACAGGGACGAGTGCTCCACCCTCACTCCGGAGGTCATCGACCGGCTGTTGCAG
GATGCCGAAAAACTTGTACCTCATCGCAGGGTTGAACTGGAGAGGGCTGGACTATACAAG
TTGAAAGCCCTAGTAGAAGAATGGGAGGAACGCGCCCGAGCTGTCCTCATAGATACAACA
AAGTCGAAAGATTCGTCGGAAGCGGACGAGCCGCAGTACACGACCCTGGCCGAGCTGAGT
CTGCTGCTCGCCGACGGTGATGAGATCGAGGCGGCCCTGCCCTCGTACCACGCGCTGCAG
ACCGCCGTGGCTCACGCAAAGGACTGGCTGGCCAAGGTTGAAGAGATGCAATCCAAAGAT
CTGTACCCGTACATGCACAGCGTGGAGTCTGTTGTGCGCCGCGGGCAACAGATCCCGCTG
GCGCTGTACGAGAAAGATCAGTTGGCGGCCGCCCTACAGTCTGCCAAGGAATGGAAACGT
GGTGCGGCCGAAATGTTTCTAAAAAAGGTGTGTGGCAAGGTCGACCTAATGAATTGGCCA
TATTCGTTACTGGAAGCCCTGTCGCCAAG
(3629 bp)

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