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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10510_c0_seq1
Scaffold_idBomo_Scaf040
NCBI non-redundant
(nr)		Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:1.80 TPM:1.97
ORF EntryO_BomoFB14642_5prime_partial:A_BomoFB_comp10510_c0_seq1
Sequence
(Nucleotide)
AAAAAAAAAACAAAATATATATGTTACAAAAAAAATAATAATAATAAATGCAATTAATTA
TACACTAGGTTTATATATGACGTGTAACATTTTTTTTAAACATTTTTTTTGCTATAAATA
CTAAGTACATACACATATCTATCGCTAAATCGTTTCCATGGTTTTAAGTTCTATCAAAAT
AATAATTAAAATAACAATTTCTTTCTTAAGTAACTAAATGTCAAACATAAACTGAGTAAT
CAAGTATCTAATCACTGTCATCAACACTATAACTAGATTCATCAGATTCTAATTCTCTAC
AGAACGACATCCAAGGCTGAATCTTATCAATAGATACAACTGCTTCATACCTTCTACCTT
TTTTGCGAGTCATTGGTATATCTTCTACCACGAACCTATCATTGGGAAGAACCTTTAGTA
TACGATAAGGGCCTTGGTACTTAACAGAGAGCTTTTGAGATTTTCCATCGTGCGGAGCCT
GCCTTGCTAAGCGTACTAAATCCCCTTCTTGGTACTGCCTCGCTGGTTTCCTATGCTTAT
TAAAATTGACTGCATCTTTAACTTGTTGCTGTTTTTTTTTTTTTTTACTAGCCTGTTGTC
TGACTTCCGCCAATTCCTCAATGGGAGTCCTATTTAGGGTGTCATTGATTACCGTACTAA
GTATGCTTTCCGTTCTATTAATTATGTTAAATCCAAATAGTAGCTCAGAGGGGCTCTTTT
GGGTAGTTTTATGTCGAGCTGTGTTCATACCAACCTGTATATCAGTGATGTGGTTGTCCC
ACGACTTGTCGTCGCCGCCGTGATTGGCTGTCGATAGAGCATCTAAAATCGTTCTATTAA
ACCTTTCTACTTGCCCGTTTGCTCGAGGCGTTGCAACGGCATTTACAATATGTTTGATCC
CGTAAGAGGTCGTAAAATCTTGAAACGCCTTACTGGTGAAACTCGTACCTTTATCTTTTC
GATTGGGTGGAGTTCTCCTTCTCGTTTATCACCTGGAGCTTTGTGGTACGCGCACTCAAG
GCAGGAGGTAACATACTTCCGGACGAGACGCCGCATTTTCGCGAACCAATAATGGCCTCG
GATGCGCTGTAGGGTTCTTTCAAAACCACAATGGCCAACGTCATCGTGGTTCATTTTTAA
AATTTGCCAGCGTACACTTTTGGGTACCAGCCATTTTATTTCGTCACCTACCACGCGGTA
AACATGGACATTCTTCAGTCTGTAGTTTTTGTGTATGTCCGCTACCTCCGCCGATGAAGG
GTCAGAAAGAATCCTTTTGATTTTATTTATCTCGTCATCTGCAGTTTGTACCGTCGTAAT
CCAGTCCTGTTCGATTTGCTGTATTTGTAAAACATCTAGTACATGTGTTACCTGAAGAAG
AATTGACTGGGTTTCTGCTTAGGGCATTCGCGTGTGCCATGCTAACACCAGGCCGGTACT
CGATTGTACAGTCGTACTTCTGAAGTTGGACCCACCACCTAGCTATGCGAGGTATCAAGT
CACGCTTAGTTAGAGTGGACCTGAGTGCATTGCAATCGGTCAAGATTTTAAATGGTATTC
CCACTAAATAAACCCTAAACTGATTGAGAGATGCAATGACCGCCAAAGTTTCGAGCTCGT
ACGAATGAAACTTGCGTTCGTCAGCGGTAGTTTTCCTGCTGAAGTAGGAAACTGGTTGCA
ATGCACCATTACAGTTACGCTGCAGTAAAATACCCGCTAGGCCTTCTTTGCAAGCGTCCG
TATGTAGCTCGGTTTCGGACTTAGGATCGTATAGAGCTAGCACCGGTCACTCCACCAGAG
CGCTTTTAGTGCCTGTGAACGCCTGATCCTGTTCGGCCAACCCCAGTTAGCGTCTTTCTT
CAGTAAATCCGTTAACGGTGCAGTTATCGTAACATATCCCTGTATAAACCGTCTGAAGAA
CCCAGACATACCCAGAAATTGACGCAATTCGTGCTGATTGGTAGGTGTTGGGAATTTTGA
GACGGCTTCAGTTTTTTCTTTACTACCTGGGCGGATACCATTAGCACTCACTTCAAACCC
TAGAAAGTCTATGACATTCAAAAAGAAATAGCACTTACTTAATTTCAGTGTGAGAACTTC
GCCTAGTCTTTGGATGCCTTCCCTAAAATCCTTGGATGGTATCAGTATGTCATCCATGTA
GACAACAGCATATTTAATTTGGGCCTCCTTTAATATTTTATGGATTGTCCTTTGGAACAC
AGATGGTGCATTAACTAGTCCGAAAGGCATGCGGTTGTATTCATACTGCCCATCAAGTGT
TACAAAGGCAGTTTTACTACGGGAGGCCTCGGCGACTGGTGTTTGATAGTACCCGGAAGC
AAGGTCCAATGACGTAAATAGGGTGTTACCGGATAATAGGTCCAACTGATCCTCGACTCT
TGGTAGGGGGTAGTGTTCCTTTTTGGGCTTTCTGTTTAGAGCTCGATAGTCCACATACAA
TCGTTTCTCACTATTCTTTTTTTTGTACCAGGACTATAGGACTGGCATATGATGAAGATG
ACTCCCTAGCTCTACCATTATCTACCATCTCCTTAACCATGTCTCTTACTAATTGTCGCT
CAGTATGTGACATACGGCATGGGCGATACACGACTGGTTCCGTGTCGTTAAGGTCGATAA
CCATCTCAGTGATGTTGGTAAACCCAAGGTCCTTGAGTCCACTTGAGAAGTGTAGTTCTT
CGCGTTGCTGTTTTGTTAGCTCAGGATTGCAACTGATCTCTTCATCCAGTCCCCTATCGG
TAAGAACGCTACAAGATTGG
(2780 bp)

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