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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10508_c1_seq19
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.25 TPM:0.28
ORF EntryO_BomoFB14566_complete:A_BomoFB_comp10508_c1_seq19
Sequence
(Nucleotide)
TATAGCGACTAAGAATTTTATTATTTACAATTCAATAAAAACATGTTTGATTCGTCTATC
CACGAACAGTATTAACAAGTAATTTCTTGCTCATTTATACATATTTAGCTGTGCAACTGT
GCCATTTGTTATTTGTGTTAGTGTAGTGAAAAACTTAATCTTAAGTCTGAAGAAAATATG
GATGACCTAGATGCTTTGCTTGCCGACCTCCAGAACTCTATCAACCCTGGCGGCGCCCGA
GTCAGCAGCCCCAGCGGCAGGACCACGTCGCCCGGCGGTCGCACCAGTTCCCCGGGCAGA
ACTGGGTCTCCTCTAGGCAGAGGCACTTCACCGGGCCGTCTCAGCTCGTCAGGCAGCCTG
AGTTCCCCCACCTCCACCGGCTACGGATCCATCAATGGATCTAGGAATATTAGCTCGGAT
TATGCAAAACCTGCTTCGCCAACTTACCAAAACACAAGCTCATTCCACTCAGAGAAGATG
ACTCCGCACAAATATACGAGTACCGTCCAAAGCAACTACAGTACCCACACGCCCGGTTAC
AACGTGGGACAATCGCCAGGCTACGGCAGGACCGGTGGTCGAGGGAACCTGAGCGAGCTG
GACACCCTACTCGACGACTTGAGCAGTGCCCGCTACGGGAATTACGCAGAAAAAACTTCG
TTCACCGAAAGATCTGTAAATGACAGCTACGGGCGCAGTAACGGAGCCATCAGTCCGGCG
TCAGCGAGGCCCACGGTCGACTCCTTGCTGGATCAATTAAGCGCGGAAATACCTAATGGC
CGCCAATCCACATCTCCAATACCACCGCCATCGACGGGAGGAACTCTCCCCAGACCGGGC
ACCAAACAGGTGACCGTCACCGTGCAGGAGACGGTCGTAGAACCCGCTCAGGCTCAGCAA
CAGATTCCAGTGGCGGCCCCTGTAGTCCGGCACCAGCACCACGCGTCCAGCGCCACCAAG
GAACTTGATGACTTGATGGCGTCGCTCTCCGACTTCAAGGTTAGCGGCACAGGGGGAGAT
AGCGGGACTCACGTGTACAGAGAGAAACGCGCGTGGCAGGAACAGTACCGCACCAACCCG
CGTCAACCCGAGTCCGCATCTCTCGAGCATATGCTCGGATCTCTTCGGGCAGACATGAGC
CGCCAAGGAGTACAAACCCCCCAGAAGGGATGCTGTAACGCCTGCGAGAAACCAATCGTT
GGACAGGTGATCACGGCGCTGGGTCGCACCTGGCACCCTGAGCACTTCACCTGCGCTCAC
TGCAACCAGGAACTGGGCACGAGGAACTTCTTCGAGCGCGACGGCAGGCCCTACTGCGAA
CCCGACTACCACAATCTGTTCTCACCGAGATGCGCTTACTGCAACGGACCAATCTTGGAT
AAATGCGTCACAGCTCTAGAGAAAACGTGGCACACGGAGCACTTCTTTTGCGCTCAATGC
GGTCAGCAATTTGGGGAAGAGGGTTTCCATGAAAGGGACGGGAAGCCCTACTGCAGGGCT
GATTACTTTGACATGTTCGCCCCCAAATGCGGTGGTTGCAATAAGCCCATAATGGAAAAC
TATATCTCAGCGCTCAACACCCAGTGGCATCCAGACTGTTTCGTTTGCAAGGAATGCCGT
GAGCCTTTCCACGGAGGTTCGTTCTTCGAGCACGAGGGCCAACCGTACTGCGAGACGCAT
TACCACGGAAAGCGAGGGTCATTATGCGCGGGCTGCCACAAACCGATCGCGGGCCGATGC
ATCACGGCGATGTTCAGGAAATTCCACCCGGAGCACTTCGTCTGCGCGTTTTGCCTTCGA
CAACTCAACAAAGGCACTTTCAAAGAACAAAACGACAAGCCGTACTGCCACGCGTGCTTT
GACAAGCTGTTCGGGTAAAATGGCGGCGAGCGAACGCAAAATGGCGCCTGTTGTTGTCAC
ATCAAAATGTCGGATATCGACAAATAAATTTTATGTAATACGACTTTTATTAATTATTGA
TCGGATACAATATATTCGTATTGTTATAAAAATCGATTTATTATATTATTAAACTAAATG
GAATAACATTAGATTTTATGTGAGAACATTGTTTGTTTTTTGTGAGATTTAAAGTCTCGA
ACAATGAAGTCTAAATATAAACTCATCTGCTCACGATCTTAATAGCTCATTGAAAAAGAT
AATCGATAATCGAAAATTCGAAAAAAAAAAAAACATTTTTTATTGGTCTAAGTTGTAAAG
TTATCAATAAAAGTAAGGAATAATACGCAGTAGTAATTTACTACCATTAATTCCTTAAAA
TCTCTATAAAATTCACTACAGTTATGTTTAAGGTAAAGAAAACAATGAAAAAAATATTCA
TTTTCTTACTAAAATGTTAAATTTCTTAAAATATAACGGATATTCTTTGAAATAGTAGTA
GCTAGATAAGTGCATGTGATGACTAATTATAAAATATTTATATAAACCCTTATACAGTTT
AGATAGGTTTAAATGTTTTTGTCGTCGGTCTAAAATGTCACAGACATTAATTGAATAAGG
TTATAAATAAATATACGCGGTTAGGTCATAAACAATATTTTTTTAAATAGTGTAGACCAG
GAGCCTCCTATGTTATTTGTTTTAGATTTTGGTACGCTGATAAATTAGGAAACGGTCAGC
ACACCCTTGTAAGTAACAATCGCTGAATTTTTACTAAATCTCCCATTCTACTTAGGGAGA
GAGAACTCAAATAGGGAATATTTGAAGAGTTGAATATGGAGTTCATGTGTCAAAGCATTT
CTTGCCTAAATATCGCTAAGTAATACCACTTATACAACAGGTAAACATACTGTAGCTTGT
TCGGAGATTTTAACGACCGGCTGTCTAAAATCAGTCATTCGCGGAAATTTCATTTCCATG
TGGTTATCGATTTTTGTTTATAAATGTCTCATAAAATTCAAACGATAAATAAAATAAATA
AATGGACATCATAAATAAATAAACCAATATGTATTAAAAACAATTTAGAAAAGGACCGTT
TCAACAATCAAGATAGAACCCACATATTTCCATTATGACGTCATTGCTTCAGTTATAGAA
ATTTAATACCAAGTATAATATACCTGTGAAGTGACAGAGCATCATTAGCCTCTTTAAATT
ATTTCTTCAACACGGTACATATTGTATTGAATTATATTCTTTACTCAGTATTTGTTTTTA
ATAAACACGACATCAGTCAATTATATTATTAACCCTGGTAACGTGTTATGTTAGAAAACA
AATAGTGGGTACTACAGTCGTAATACCCACATTTTATTTTGTTCAGTGAAACGGATTATA
TGAGGTATCATCATCATCAGCCTTTATCTGCCCACTGCTGGACATAGGCCTTCCCCAATG
CCTTCCACATAATGCGGTCCTCCGCCTTCCGCATCCAACGACTTCCCGCCGTGCGCACTA
AGTCGTCAGTCCACCTGGTTGGAGGACGCCCCACGCTCCTTGTACCCATCCGTGGCCTCC
ATTCGAGGACTTTCCCCCCCACCTGGCGTCGCTGGCTCGACAGATGTGACCGGCCCATTG
CCACTTCAGCCTGCTAACTTTGCGAGCTATGTCGTCGACTTTGGTTCTCCGTCG
(3594 bp)

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