SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10508_c1_seq12
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_leupaxin_isoform_X3_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.52 TPM:2.76
ORF EntryO_BomoFB14550_5prime_partial:A_BomoFB_comp10508_c1_seq12
Sequence
(Nucleotide)
AGTACATAGAAAAACATTTCACTCCGACGGCATTCGTCTCGATCAAAAGCACCCGTCCGA
CTTTATACGCGCTGTTAGCGGCACAGGGGGAGATAGCGGGACTCACGTGTACAGAGAGAA
ACGCGCGTGGCAGGAACAGTACCGCACCAACCCGCGTCAACCCGAGTCCGCATCTCTCGA
GCATATGCTCGGATCTCTTCGGGCAGACATGAGCCGCCAAGGAGTACAAACCCCCCAGAA
GGGATGCTGTAACGCCTGCGAGAAACCAATCGTTGGACAGGTGATCACGGCGCTGGGTCG
CACCTGGCACCCTGAGCACTTCACCTGCGCTCACTGCAACCAGGAACTGGGCACGAGGAA
CTTCTTCGAGCGCGACGGCAGGCCCTACTGCGAACCCGACTACCACAATCTGTTCTCACC
GAGATGCGCTTACTGCAACGGACCAATCTTGGATAAATGCGTCACAGCTCTAGAGAAAAC
GTGGCACACGGAGCACTTCTTTTGCGCTCAATGCGGTCAGCAATTTGGGGAAGAGGGTTT
CCATGAAAGGGACGGGAAGCCCTACTGCAGGGCTGATTACTTTGACATGTTCGCCCCCAA
ATGCGGTGGTTGCAATAAGCCCATAATGGAAAACTATATCTCAGCGCTCAACACCCAGTG
GCATCCAGACTGTTTCGTTTGCAAGGAATGCCGTGAGCCTTTCCACGGAGGTTCGTTCTT
CGAGCACGAGGGCCAACCGTACTGCGAGACGCATTACCACGGAAAGCGAGGGTCATTATG
CGCGGGCTGCCACAAACCGATCGCGGGCCGATGCATCACGGCGATGTTCAGGAAATTCCA
CCCGGAGCACTTCGTCTGCGCGTTTTGCCTTCGACAACTCAACAAAGGCACTTTCAAAGA
ACAAAACGACAAGCCGTACTGCCACGCGTGCTTTGACAAGCTGTTCGGGTAAAATGGCGG
CGAGCGAACGCAAAATGGCGCCTGTTGTTGTCACATCAAAATGTCGGATATCGACAAATA
AATTTTATGTAATACGACTTTTATTAATTATTGATCGGATACAATATATTCGTATTGTTA
TAAAAATCGATTTATTATATTATTAAACTAAATGGAATAACATTAGATTTTATGTGAGAA
CATTGTTTGTTTTTTGTGAGATTTAAAGTCTCGAACAATGAAGTCTAAATATAAACTCAT
CTGCTCACGATCTTAATAGCTCATTGAAAAAGATAATCGATAATCGAAAATTCGAAAAAA
AAAAAAACATTTTTTATTGGTCTAAGTTGTAAAGTTATCAATAAAAGTAAGGAATAATAC
GCAGTAGTAATTTACTACCATTAATTCCTTAAAATCTCTATAAAATTCACTACAGTTATG
TTTAAGGTAAAGAAAACAATGAAAAAAATATTCATTTTCTTACTAAAATGTTAAATTTCT
TAAAATATAACGGATATTCTTTGAAATAGTAGTAGCTAGATAAGTGCATGTGATGACTAA
TTATAAAATATTTATATAAACCCTTATACAGTTTAGATAGGTTTAAATGTTTTTGTCGTC
GGTCTAAAATGTCACAGACATTAATTGAATAAGGTTATAAATAAATATACGCGGTTAGGT
CATAAACAATATTTTTTTAAATAGTGTAGACCAGGAGCCTCCTATGTTATTTGTTTTAGA
TTTTGGTACGCTGATAAATTAGGAAACGGTCAGCACACCCTTGTAAGTAACAATCGCTGA
ATTTTTACTAAATCTCCCATTCTACTTAGGGAGAGAGAACTCAAATAGGGAATATTTGAA
GAGTTGAATATGGAGTTCATGTGTCAAAGCATTTCTTGCCTAAATATCGCTAAGTAATAC
CACTTATACAACAGGTAAACATACTGTAGCTTGTTCGGAGATTTTAACGACCGGCTGTCT
AAAATCAGTCATTCGCGGAAATTTCATTTCCATGTGGTTATCGATTTTTGTTTATAAATG
TCTCATAAAATTCAAACGATAAATAAAATAAATAAATGGACATCATAAATAAATAAACCA
ATATGTATTAAAAACAATTTAGAAAAGGACCGTTTCAACAATCAAGATAGAACCCACATA
TTTCCATTATGACGTCATTGCTTCAGTTATAGAAATTTAATACCAAGTATAATATACCTG
TGAAGTGACAGAGCATCATTAGCCTCTTTAAATTATTTCTTCAACACGGTACATATTGTA
TTGAATTATATTCTTTACTCAGTATTTGTTTTTAATAAACACGACATCAGTCAATTATAT
TATTAACCCTGGTAACGTGTTATGTTAGAAAACAAATAGTGGGTACTACAGTCGTAATAC
CCACATTTTATTTTGTTCAGTGAAACGGATTATATGAGGTATCATCATCATCAGCCTTTA
TCTGCCCACTGCTGGACATAGGCCTTCCCCAATGCCTTCCACATAATGCGGTCCTCCGCC
TTCCGCATCCAACGACTTCCCGCCGTGCGCACTAAGTCGTCAGTCCACCTGGTTTTTTAC
AGAAAAGTACGACATGTTCAGGTCAAATATATTTGTTTGCAATCATAACATGTATGGGTT
GTTTTGCAGTGTTTTTTCGCAGGACATACCTACAATCTCTTATGAGTATTGGGTCTCTTA
GCTGGAGGCTCCTCCGAATCTTCACTAACAAATAATGCTATTTTTTTCGCATTTCTCGAG
GCAAACGTGTCACATTCTGGCGTACTCTCAGATGCTCACTCACAGGGGCAAGGCCTAGCT
TCTTCATATATTGACACCGCTTTTGATTCCACTCATTATTGATTCCATGTATGTATGTAA
GTCCGTTGACAGCAAACATGTTCAAAAAGGCGTAGAAAACTCAAAGATCAGTTTTTTGAA
TTGCGACACACGTCATATTATTATGTAGCGTACAACTAACTCATCAGCCATATCCACTCC
ATATTTTATTGAATTGTAATACGTATTGATTTCCGACTTTTGCTTTTCTCCAGATGAATT
ATCAATACTGTTATTATGGTGCAGACTTGACATCAGCAGACTCCTGATCAGAGGACATGA
CATCCGAGTCATATGCTTCAAGAATTGATGAAATACGTTTTCGTCCTCCTTCCTCTCAAT
CCATTTTTTTTTCGATATATTAATAAAAATATAGCAAAATAGTAAGAAATTATAGTTCAA
ACATAAAATGTAAAATAACAACACTTAAAACAATGAATAAACATAAAAGCCATATTGGAA
ACAATGGCGCAAAACTGTTACACCGAGTACGGGGATGGGTCATATTTACCCCTTTTTAAC
TTTGGTCACAGTTAGCTCCAAGCACGGTCGCAGCATAACTATATAATTGTAAACAATGCT
TAGAGGAAGCCATAAATTCCAGCTATTGAGAAGTACAGCATCGTCACTTGCGTAATTACG
AATCTGTAAGCTAACAAAAACGTCTCGGGTCATTTTGACCCAACCCCCATGACGCCGGGT
TAAAGGCTATTTTTAGAAATTGCATATGATGAAGGAGTTAAAAAGTACAAGTAACAAAAG
TTTGTTGTCCGTTTTCTCAAAATTAACAAATTGTATCATATCCCCTTCATCCAGTCATGT
CTTCATGTAATTTTTCAATTCAGCACATTTCAGTCATTTTTAACTACAATATTCGCATCG
TTCTACTGTATTGTATGCTAGGTCTTATAATGGGTTTTTGAGTTCTTACTGCCGAACACT
TTTTCAAGAGTTCTCCTTGCACTCCATAAGAACGAAGAAACTTATCATTAGGCACTAGCG
CAAGTTTACGATATATTCGAATCATATCCCTTTTCAAATCTTTGTCACGCGATTCGACTT
ATCACTATGATATTATATTCATTAAATAATATTTGTTAAACATTTGTGCCTTATGTGCTG
ATGATTAATTAAGCTAGACTGTATGGCCTTGTAGCCCTGGGTGGAAAATAAATAAACAAA
AAAATCTGATGATAAATTTTAGCGGGAATATAAACAGTGATGGCTGGTTAAAATAAATTT
TGTAAATTTCGCATGCGTCAGGTATTGAATTATAAACCGTATATTATTTGTGAAAGAAAT
CTGATTGATAATATTGCGGGACATCGCTTCACATATACCTCCAAAAAGTACATTAAAATA
GTTTTTTTGGGATTTTATAACCTGGTAACTAAGACCTTTAGGTAAAGTCTTATTTTAATT
TTAATTCTTTTATTGTATGAAAAATGAT
(4228 bp)

- SilkBase 1999-2023 -