SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10397_c0_seq7
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		chromodomain-helicase-DNA-binding_protein_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008026 F helicase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
Transcript
Level		FPKM:5.64 TPM:6.18
ORF EntryO_BomoFB13624_complete:A_BomoFB_comp10397_c0_seq7
Sequence
(Nucleotide)
AGTTGCTCGAAGATGGCAATATGGCTGCCGCGTTCGAGTTTCACTGGCAGTGCGCGGTGC
TCGTTTCGTTTCTCGTATAGGATTGGTGTTCTTGACGGCTCAAAGTTTCATTTTTTATTT
TTTGTGGTTATTCTCTTTCTTTACTTCAATTTGTTAACGAATATTACCAAAATTAAAGTT
ATTTCATTCTTGTAGTCATCAGAACTTACTCGTCGACAAAATGGCGTCGCTTCACAAGAT
TTTGCAGCCAAATGATTTTGTTCAATTTTTCACTCTTTCATGAAAATATGATTAAAATTT
ATTTGTTCAGTATATTAATAAGATTTTTTTCAATGAAATGTTTTAAGAAAATCGGTTTTG
AGCCAATATTATACGAGTAACAGTGAATTTCTTAAATAATCACCAAAATGCACCTGAAGG
GTTCCATAAATGAATCTGAAAGTGATTCCACAAGTGAAAAAGGAGATAAAAGTGACTCCA
GCGAATCAGGCTCTGGAAGCGAAAGTGAAAGTGGCTCTAGTTCCTCAGGTTCAGGATCAC
ACAGATCTGCATCAGAAAAATCTGGTGTAGGGGGTTCACATCATAGTGATGATAGCAAAA
CATCACATAACTATGATAATGCGAATTCATCAAAATCTGACCATCATACTGATAAAAATA
GTTCTGATGAAGACTCAGCACCAAAGTCTAGATCTAGAAATAGCCATAGCAAAGTAAAAT
CTGATCTTTGGGAAGAAAATCCAGATATATATGGAATCAGAAGATCAGCACGGCCAAGAA
AAGAGCCAGATAGATTAAAATTAGCAGATAGTGATTCTAGTGAAAGAGATAGAACTCACA
GTCGGAAAAGTAGAAAAAAAAGCAACTCATGGAATTCTGATACATCAGAAAGTGACAGTG
AAATAGGGGGCTCTCCACCACCACCATCAAAGAGACCTGGCCAAAGAAGTCTACCTCTGA
GGAAAAAGAAACCGAGTAGGAGAAGAAGGTATTCTAGTGACGAAGAAGAGAGTTCAGAGG
GTACAGATGATGAAAGCAAGAGTCGAACAACAACAAGACGTACAGGCGCAGCAGTTAGTT
ATAAAGAAGCAAGTGATGAACAAACTGATTCTTCTGATCTTTTGGAGGTGGAAGGTGTGG
AAGGAGATGGTGAAGCTGAGCCAGAACCTGAGGATCATAGTGAGACAATAGAACGAGTTC
TGGGAATGCGACGAGGGAAAAAAGGAGTCACTGGCAATGTGACCACCATTTATTATATAG
AAGAACATGGAGACCCTAATGAAGGTTGTGACCCTAATGATGAAGACTCTACTGAACCTC
AATACCTGATAAAGTGGAAAGGATGGTCACATATTCACAACACATGGGAATCTGAAAAGA
CAATTAATGATCAAAAAGTTAAAGGCTTAAAGAAACTGGAAAACTTTATTAAGAAAGAAG
TAGAAATCTCATGGTGGAGACAGCAAGCTGGACCTGAGGATATAGATTACTATGAGTGTC
AGTCTGAACTACAGCAAGAATTAGTTAAAACCTACAATAACGTTGAAAGGATAATAGCTG
AACAAAATCGTGAGCTAGAAGGTGGTGGAACTGCTCATGAATATTTTTGCAAATGGGAAT
CTCTTCCATATGCTGATGCAACATGGGAAGATGCAGTTTTAATAGAGAAAAGATGGCCTG
TTGAGGTGGAGCACTTTAAAAGTCGAGAAGCTGCTAAAAGTACTCCATCTAGGCATTGCC
CTGTATTGAAAAGGCGACCCAAGTTTCATCAGATAAAAGAACAACCTGAATACGTGGGAA
AAGATTCAAGTTACCACTTGAGAGATTATCAAATGGATGGATTGAATTGGTTAATTCACT
CATGGTGTAAAGACAATTCAGTAATTTTAGCAGATGAAATGGGCCTAGGCAAAACGATAC
AGACAATTTGTTTTTTATACTATCTCTTCAAGTCGCAACATCTGTATGGACCATTTCTTT
GTGTAGTGCCTCTGAGTACAATGACTGCCTGGCAAAGGGAATTTCAGCAGTGGGCACCCG
ACATTAATGTTGTTACTTATATTGGTGATGTTAGTAGCAGAGATATAATTAGGCAGTTTG
AGTGGAGCTTTTCTAGCTCAAAAAGACTGAAATTTAACGCAATATTAACCACATATGAGA
TTTTGTTAAAAGACAGACAGTTTTTAAGGTCTTTTAGTTGGGCTTGCTTGCTTGTAGATG
AGGCTCATAGGTTAAAAAACGATGACTCTCTACTATATAAGGCCTTAAAAGAATTTGATA
CCAATCATAGATTATTAGTTACTGGTACACCTTTACAAAACTCACTGAAAGAATTGTGGG
CCCTTTTACATTTTATAATGCCTTACAAGTTTGAGTCTTGGGAAGACTTTGAAAAAGATC
ATGAAGATGCTGCTACCAAAGGATACGAAAAATTACACAAACAGTTAGAACCGTTTATAT
TAAGGAGGCAGAAAAAAGATGTAGAAAAATCATTACCTGCCAAAGTGGAACAAATATTAA
GGGTGGAAATGACATCTATACAAAAACAATACTACAAATGGATATTAACAAAAAACTATA
GTGCACTTAGAAAAGGCGTAAAAGGTTCAATTAACACATTTATCAATATTGTTATTGAAC
TAAAAAAATGTTGCAACCATGCATTATTGACAAAGCCAGAAGATTTCGAGTCTAGAGCTT
CTCTTGCTACTTCGGATGCTGTTGAGAAACTTCTTAGGGGCTCAGGAAAATTACTTTTGC
TAGATAAACTGCTGTGCAGGTTAAAGGAGACTGGTCATAGGGTTTTAATCTTTTCTCAAA
TGGTCCGAATGTTAGACATTTTAGCAGAATATTTACAAAGGAGACATTTTCCTTTTCAAC
GTCTTGATGGAAGCATTAAAGGTGAATTGAGAAAACAAGCACTTGATCATTTTAACGCTG
AAGGTTCGCAAGACTTCTGTTTTTTGTTGTCTACTCGTGCTGGTGGGTTAGGTATTAACC
TTGCCACTGCAGATACTGTGATAATATTTGACTCAGACTGGAATCCTCAAAATGATTTGC
AAGCACAAGCACGAGCACATCGTATTGGTCAAAAAAATCAGGTTAATATTTATAGGTTAG
TGACTGCAAGGTCTGTTGAAGAAGATATTGTAGAGAGAGCAAAAAGAAAAATGGTTTTAG
ACCACCTGGTAATTCAAAGAATGGATACTACTGGAAAAACTGTGCTGAACAAACGGGATG
CTTCAGGGACCACAGCCAATAATCCATTCAATAAAGAAGATTTAAATGCTATTTTAAAAT
TTGGTGCTGAAGAGCTTTTTAAAGATGATGAAGAAAATGATGAAGACCCAGTTTGTGACA
TTGATGAAATTTTGCAAAGGGCTGAAACCCGGGATGAAGGTCCTGCAATGGTGGGTGATG
AGTTACTGTCAGCTTTTAAGGTGGCTAGTTTTACTTTTGATGAAGAGAAAGCTGTCAATG
AACTGAAGAAAGATAATGCTGATGAAGAACCTAAAGACTGGGATGACATCATCCCTGAAA
ATGTTCGGAAAACAATAGCAGAAGCAGAAAAATTAAAAGAAATGGAAGATATTTATTTGC
CACCTCGAAGAAAAAATCAACTACAAAATAATGCTGATGGTGGTAGAAGACGTCGCGGTC
GTTCTGGTGATGGTGGCGATGGCGATGGTGTTGATGGTGACGGTGAGGCTGAAAGCGATG
CATCTGATGGTGAAGCCAGTGCTGATGATGATCGACCGAGAAAAAGAGGTCGTCCTCCTG
CTTCACATCGGGAGAAAATCAAAGGCTTCACAGATCAAGAGATAAGACGTTTTGTGAAAA
GCTATAAGAAATTTTCCGCGCCACTGAAGCATCTCGACAGTATAGCGTGTGATGCCGAAT
TACAAGAAAAACCATTAGCTGAGCTAAAAAGACTGGGTGAAATACTGCAGGAAAGATGTA
AAGCTGTACTTAGTGAGACAGCAGAACCAAGTGAACAAAATGAAGGCCGTAAAAACAACA
GGAAGACATTTAAACTCGGAGGAGTACCTGTAAATGCGAAAACCCTAGCTGCATGTCAAG
ATGAGTTGGCAGCTTTGGATGACTTTCTGCCACAAACTAAAGAAGAACGTCTCAAGTGGC
AACTAGATTTTAGGACGAGACCAGCGAATTTTGATGTTGAGTGGAATGTCTCGGACGATT
CAAAATTACTAGCAGGAATATACCAATATGGTCTGGGATCATGGGAAGCAATAAAAATGG
ATTCTTCTTTCGAAATAGGAGATAAAATATTAACGAATGAGGATAAAAAACCTCAAGCAA
AACACCTACAGTCGCGAGCAGAGTACTTATTAAAGCTTATTAAAAAGTTACTGGATCAAA
AGAATGGAAAACAAAAAATGAAAAAACCTCGACCGAAGAGGGCAAATAAAGAACCGGTCA
CCAAAGATATTGTCGAAGATGACGGTAGCTCAGCTGAAGATAAAAAAACTAAAGGTGTTA
AAAATGATAAAACTGAAAAGGGTAAATTAAAAATTGAAGAAGTTTCTACACATGATGAAA
CTTCTAACGATAAGAAAGAAAAAGACAAAAAACGTAAAAAAGACGAAGACCGCAAGGGTG
ACAAATCTAAAGGACGGAAGAAACCACGACAAAGAGGAAATGAAGGAATACCAGGTCCCA
TGCATTTTACTGCCAACAATGAACCAAGGGCCTTGGAAGTCTTAGGAGATTTAGATCCAT
CAGTTTTTGAAGAGTGCAAAGAAAAAATGAGACCAGTTAAAAAGGCTCTAAAGGCTCTCG
ACAATCCAGACCAATCTTTATCGGAAACTGAACAAGTGTCAAGAACCAGGGCCTGCCTCA
CCCAGATAGGTACTCAAATAGATTTGTGTGTTGAAGCATATCCAGATTCTCAAAAAGTAG
AATGGAGAAGTAATCTCTGGTACTTCGTTTCAAAATTCACTAACTTTGATGCAAAGCAGT
TGTACAAGTTGTACAAGTATGGCCTAAAGAAAAATGAAGCTTCAAAGCAAAAAGATGGGA
AGCATAAAGAAAATGTCAAGACAAATAATCGTAATAATCATAACTCCATAAACCATTTAA
AATCATTCAAGAAAAATTCAAATTCAAAGCAAAAAAGTGATACAAATGATAAAAAAGAAA
AGAAAATGAAGCTAGAAAAGGAGAAAACTGATAAGCACGATAAAAACCAGCATACATCAG
GGGTCAAGAGAAAACTAGAAGATGGAGAATGTGACCCAGAACCCAATGATAATAAACGCC
ACGAAAGAGAACGGAGTCGGTCGGAACGAGAGAGGGATCGTGATCGAGAAAGGGACAGGG
ATCGTGACCGAGAACGCGATCGAGATCGCGAAAGGGACCGAGACCGTTCGCGGACACGGC
GGGACAGCGGCGGCGCGGGGGGGCCGCGGGCTCGGCCTTATGTGGCACAGCACGCGCACG
TCGAGCACCCCTCGCACCCTGCACACCCCGCCTGGACCCCGCCGCCCTATCCCGGGCCCC
GACAGTACCGCGGAGACCGCAATCAGAGACAACACGATAAAAGAAGTAGGTATGGATTCA
GTGGCATGGCAGGTCCATACGGTGGCTATTATGATAGCACAACAACCATGGCTAGTGGTA
TGGGTTTTCCGCCTGTGAGGCCTTACGCAGACGACTGGAGAGGATATTCACAGCCTGAAT
ATGGCTACGATGATCGGGAGTACGAGCGTGAAGTTTATAGAAGAGATTACGATAGACGCG
CACCACCAACATGAGGATAGTGCGTTATTTGCCGATAATTTGTAAATAATATATGTAAAT
AGTCCGTAGTTATTTCTTTGGACATCGGTTTAGCCGTTGCTTAAAGTGTAAGTGACATGT
GCTGTGTTTTTTATCTATGTGATAAGCGAAGCGCTGGTTCAGAACTGATTAATAAATAAA
TAAATAGTGTTTATGTGAGACTGTACAGTAAATTTATTTATTGTCGTATCAGTCGATTGT
TTTTGTACATATTTTAGACAATTACCAATAATTTTAAATTAATTTCTAATGTGTCGCCAA
TTTTACGGTTTAAGTATTTTGTGTGGTCTGTTTTTTATTTATTCAATACTGTGTTATCAT
TATAATTGAGTAATTGATTTGACAGACAGGTGATATGCATAGTTGATAATAAAATGTACA
AAGTTAGTAATTGTTTCTAGGAATGCATGTAATACAATCATGTGCAATCAATAATGTGTA
TAGCTTAAACAAAGAGGCACATAATCTTTTTTCATTGCATTTCTG
(6285 bp)

- SilkBase 1999-2023 -