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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10397_c0_seq6
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		chromodomain-helicase-DNA-binding_protein_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008026 F helicase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
Transcript
Level		FPKM:0.42 TPM:0.46
ORF EntryO_BomoFB13620_complete:A_BomoFB_comp10397_c0_seq6
Sequence
(Nucleotide)
AGTTGCTCGAAGATGGCAATATGGCTGCCGCGTTCGAGTTTCACTGGCAGTGCGCGGTGC
TCGTTTCGTTTCTCGTATAGGATTGGTGTTCTTGACGGCTCAAAGTTTCATTTTTTATTT
TTTGTGGTTATTCTCTTTCTTTACTTCAATTTGTTAACGAATATTACCAAAATTAAAGTT
ATTTCATTCTTGTAGTCATCAGAACTTACTCGTCGACAAAATGGCGTCGCTTCACAAGAT
TTTGCAGCCAAATGATTTTGTTCAATTTTTCACTCTTTCATGAAAATATGATTAAAATTT
ATTTGTTCAGTATATTAATAAGATTTTTTTCAATGAAATGTTTTAAGAAAATCGGTTTTG
AGCCAATATTATACGAGTAACAGTGAATTTCTTAAATAATCACCAAAATGCACCTGAAGG
GTTCCATAAATGAATCTGAAAGTGATTCCACAAGTGAAAAAGGAGATAAAAGTGACTCCA
GCGAATCAGGCTCTGGAAGCGAAAGTGAAAGTGGCTCTAGTTCCTCAGGTTCAGGATCAC
ACAGATCTGCATCAGAAAAATCTGGTGTAGGGGGTTCACATCATAGTGATGATAGCAAAA
CATCACATAACTATGATAATGCGAATTCATCAAAATCTGACCATCATACTGATAAAAATA
GTTCTGATGAAGACTCAGCACCAAAGTCTAGATCTAGAAATAGCCATAGCAAAGTAAAAT
CTGATCTTTGGGAAGAAAATCCAGATATATATGGAATCAGAAGATCAGCACGGCCAAGAA
AAGAGCCAGATAGATTAAAATTAGCAGATAGTGATTCTAGTGAAAGAGATAGAACTCACA
GTCGGAAAAGTAGAAAAAAAAGCAACTCATGGAATTCTGATACATCAGAAAGTGACAGTG
AAATAGGGGGCTCTCCACCACCACCATCAAAGAGACCTGGCCAAAGAAGTCTACCTCTGA
GGAAAAAGAAACCGAGTAGGAGAAGAAGGTATTCTAGTGACGAAGAAGAGAGTTCAGAGG
GTACAGATGATGAAAGCAAGAGGTGGAAGGTGTGGAAGGAGATGGTGAAGCTGAGCCAGA
ACCTGAGGATCATAGTGAGACAATAGAACGAGTTCTGGGAATGCGACGAGGGAAAAAAGG
AGTCACTGGCAATGTGACCACCATTTATTATATAGAAGAACATGGAGACCCTAATGAAGG
TTGTGACCCTAATGATGAAGACTCTACTGAACCTCAATACCTGATAAAGTGGAAAGGATG
GTCACATATTCACAACACATGGGAATCTGAAAAGACAATTAATGATCAAAAAGTTAAAGG
CTTAAAGAAACTGGAAAACTTTATTAAGAAAGAAGTAGAAATCTCATGGTGGAGACAGCA
AGCTGGACCTGAGGATATAGATTACTATGAGTGTCAGTCTGAACTACAGCAAGAATTAGT
TAAAACCTACAATAACGTTGAAAGGATAATAGCTGAACAAAATCGTGAGCTAGAAGGTGG
TGGAACTGCTCATGAATATTTTTGCAAATGGGAATCTCTTCCATATGCTGATGCAACATG
GGAAGATGCAGTTTTAATAGAGAAAAGATGGCCTGTTGAGGTGGAGCACTTTAAAAGTCG
AGAAGCTGCTAAAAGTACTCCATCTAGGCATTGCCCTGTATTGAAAAGGCGACCCAAGTT
TCATCAGATAAAAGAACAACCTGAATACGTGGGAAAAGATTCAAGTTACCACTTGAGAGA
TTATCAAATGGATGGATTGAATTGGTTAATTCACTCATGGTGTAAAGACAATTCAGTAAT
TTTAGCAGATGAAATGGGCCTAGGCAAAACGATACAGACAATTTGTTTTTTATACTATCT
CTTCAAGTCGCAACATCTGTATGGACCATTTCTTTGTGTAGTGCCTCTGAGTACAATGAC
TGCCTGGCAAAGGGAATTTCAGCAGTGGGCACCCGACATTAATGTTGTTACTTATATTGG
TGATGTTAGTAGCAGAGATATAATTAGGCAGTTTGAGTGGAGCTTTTCTAGCTCAAAAAG
ACTGAAATTTAACGCAATATTAACCACATATGAGATTTTGTTAAAAGACAGACAGTTTTT
AAGGTCTTTTAGTTGGGCTTGCTTGCTTGTAGATGAGGCTCATAGGTTAAAAAACGATGA
CTCTCTACTATATAAGGCCTTAAAAGAATTTGATACCAATCATAGATTATTAGTTACTGG
TACACCTTTACAAAACTCACTGAAAGAATTGTGGGCCCTTTTACATTTTATAATGCCTTA
CAAGTTTGAGTCTTGGGAAGACTTTGAAAAAGATCATGAAGATGCTGCTACCAAAGGATA
CGAAAAATTACACAAACAGTTAGAACCGTTTATATTAAGGAGGCAGAAAAAAGATGTAGA
AAAATCATTACCTGCCAAAGTGGAACAAATATTAAGGGTGGAAATGACATCTATACAAAA
ACAATACTACAAATGGATATTAACAAAAAACTATAGTGCACTTAGAAAAGGCGTAAAAGG
TTCAATTAACACATTTATCAATATTGTTATTGAACTAAAAAAATGTTGCAACCATGCATT
ATTGACAAAGCCAGAAGATTTCGAGTCTAGAGCTTCTCTTGCTACTTCGGATGCTGTTGA
GAAACTTCTTAGGGGCTCAGGAAAATTACTTTTGCTAGATAAACTGCTGTGCAGGTTAAA
GGAGACTGGTCATAGGGTTTTAATCTTTTCTCAAATGGTCCGAATGTTAGACATTTTAGC
AGAATATTTACAAAGGAGACATTTTCCTTTTCAACGTCTTGATGGAAGCATTAAAGGTGA
ATTGAGAAAACAAGCACTTGATCATTTTAACGCTGAAGGTTCGCAAGACTTCTGTTTTTT
GTTGTCTACTCGTGCTGGTGGGTTAGGTATTAACCTTGCCACTGCAGATACTGTGATAAT
ATTTGACTCAGACTGGAATCCTCAAAATGATTTGCAAGCACAAGCACGAGCACATCGTAT
TGGTCAAAAAAATCAGGTTAATATTTATAGGTTAGTGACTGCAAGGTCTGTTGAAGAAGA
TATTGTAGAGAGAGCAAAAAGAAAAATGGTTTTAGACCACCTGGTAATTCAAAGAATGGA
TACTACTGGAAAAACTGTGCTGAACAAACGGGATGCTTCAGGGACCACAGCCAATAATCC
ATTCAATAAAGAAGATTTAAATGCTATTTTAAAATTTGGTGCTGAAGAGCTTTTTAAAGA
TGATGAAGAAAATGATGAAGACCCAGTTTGTGACATTGATGAAATTTTGCAAAGGGCTGA
AACCCGGGATGAAGGTCCTGCAATGGTGGGTGATGAGTTACTGTCAGCTTTTAAGGTGGC
TAGTTTTACTTTTGATGAAGAGAAAGCTGTCAATGAACTGAAGAAAGATAATGCTGATGA
AGAACCTAAAGACTGGGATGACATCATCCCTGAAAATGTTCGGAAAACAATAGCAGAAGC
AGAAAAATTAAAAGAAATGGAAGATATTTATTTGCCACCTCGAAGAAAAAATCAACTACA
AAATAATGCTGATGGTGGTAGAAGACGTCGCGGTCGTTCTGGTGATGGTGGCGATGGCGA
TGGTGTTGATGGTGACGGTGAGGCTGAAAGCGATGCATCTGATGGTGAAGCCAGTGCTGA
TGATGATCGACCGAGAAAAAGAGGTCGTCCTCCTGCTTCACATCGGGAGAAAATCAAAGG
CTTCACAGATCAAGAGATAAGACGTTTTGTGAAAAGCTATAAGAAATTTTCCGCGCCACT
GAAGCATCTCGACAGTATAGCGTGTGATGCCGAATTACAAGAAAAACCATTAGCTGAGCT
AAAAAGACTGGGTGAAATACTGCAGGAAAGATGTAAAGCTGTACTTAGTGAGACAGCAGA
ACCAAGTGAACAAAATGAAGGCCGTAAAAACAACAGGAAGACATTTAAACTCGGAGGAGT
ACCTGTAAATGCGAAAACCCTAGCTGCATGTCAAGATGAGTTGGCAGCTTTGGATGACTT
TCTGCCACAAACTAAAGAAGAACGTCTCAAGTGGCAACTAGATTTTAGGACGAGACCAGC
GAATTTTGATGTTGAGTGGAATGTCTCGGACGATTCAAAATTACTAGCAGGAATATACCA
ATATGGTCTGGGATCATGGGAAGCAATAAAAATGGATTCTTCTTTCGAAATAGGAGATAA
AATATTAACGAATGAGGATAAAAAACCTCAAGCAAAACACCTACAGTCGCGAGCAGAGTA
CTTATTAAAGCTTATTAAAAAGTTACTGGATCAAAAGAATGGAAAACAAAAAATGAAAAA
ACCTCGACCGAAGAGGGCAAATAAAGAACCGGTCACCAAAGATATTGTCGAAGATGACGG
TAGCTCAGCTGAAGATAAAAAAACTAAAGGTGTTAAAAATGATAAAACTGAAAAGGGTAA
ATTAAAAATTGAAGAAGTTTCTACACATGATGAAACTTCTAACGATAAGAAAGAAAAAGA
CAAAAAACGTAAAAAAGACGAAGACCGCAAGGGTGACAAATCTAAAGGACGGAAGAAACC
ACGACAAAGAGGAAATGAAGGAATACCAGGTCCCATGCATTTTACTGCCAACAATGAACC
AAGGGCCTTGGAAGTCTTAGGAGATTTAGATCCATCAGTTTTTGAAGAGTGCAAAGAAAA
AATGAGACCAGTTAAAAAGGCTCTAAAGGCTCTCGACAATCCAGACCAATCTTTATCGGA
AACTGAACAAGTGTCAAGAACCAGGGCCTGCCTCACCCAGATAGGTACTCAAATAGATTT
GTGTGTTGAAGCATATCCAGATTCTCAAAAAGTAGAATGGAGAAGTAATCTCTGGTACTT
CGTTTCAAAATTCACTAACTTTGATGCAAAGCAGTTGTACAAGTTGTACAAGTATGGCCT
AAAGAAAAATGAAGCTTCAAAGCAAAAAGATGGGAAGCATAAAGAAAATGTCAAGACAAA
TAATCGTAATAATCATAACTCCATAAACCATTTAAAATCATTCAAGAAAAATTCAAATTC
AAAGCAAAAAAGTGATACAAATGATAAAAAAGAAAAGAAAATGAAGCTAGAAAAGGAGAA
AACTGATAAGCACGATAAAAACCAGCATACATCAGGGGTCAAGAGAAAACTAGAAGATGG
AGAATGTGACCCAGAACCCAATGATAATAAACGCCACGAAAGAGAACGGAGTCGGTCGGA
ACGAGAGAGGGATCGTGATCGAGAAAGGGACAGGGATCGTGACCGAGAACGCGATCGAGA
TCGCGAAAGGGACCGAGACCGTTCGCGGACACGGCGGGACAGCGGCGGCGCGGGGGGGCC
GCGGGCTCGGCCTTATGTGGCACAGCACGCGCACGTCGAGCACCCCTCGCACCCTGCACA
CCCCGCCTGGACCCCGCCGCCCTATCCCGGGCCCCGACAGTACCGCGGAGACCGCAATCA
GAGACAACACGATAAAAGAAGTAGGTATGGATTCAGTGGCATGGCAGGTCCATACGGTGG
CTATTATGATAGCACAACAACCATGGCTAGTGGTATGGGTTTTCCGCCTGTGAGGCCTTA
CGCAGACGACTGGAGAGGATATTCACAGCCTGAATATGGCTACGATGATCGGGAGTACGA
GCGTGAAGTTTATAGAAGAGATTACGATAGACGCGCACCACCAACATGAGGATAGTGCGT
TATTTGCCGATAATTTGTAAATAATATATGTAAATAGTCCGTAGTTATTTCTTTGGACAT
CGGTTTAGCCGTTGCTTAAAGTGTAAGTGACATGTGCTGTGTTTTTTATCTATGTGATAA
GCGAAGCGCTGGTTCAGAACTGATTAATAAATAAATAAATAGTGTTTATGTGAGACTGTA
CAGTAAATTTATTTATTGTCGTATCAGTCGATTGTTTTTGTACATATTTTAGACAATTAC
CAATAATTTTAAATTAATTTCTAATGTGTCGCCAATTTTACGGTTTAAGTATTTTGTGTG
GTCTGTTTTTTATTTATTCAATACTGTGTTATCATTATAATTGAGTAATTGATTTGACAG
ACAGGTGATATGCATAGTTGATAATAAAATGTACAAAGTTAGTAATTGTTTCTAGGAATG
CATGTAATACAATCATGTGCAATCAATAATGTGTATAGCTTAAACAAAGAGGCACATAAT
CTTTTTTCATTGCATTTCTG
(6200 bp)

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