SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10397_c0_seq1
Scaffold_idBomo_Scaf215
NCBI non-redundant
(nr)		chromodomain-helicase-DNA-binding_protein_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008026 F helicase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
Transcript
Level		FPKM:0.23 TPM:0.25
ORF EntryO_BomoFB13597_complete:A_BomoFB_comp10397_c0_seq1
Sequence
(Nucleotide)
GGGAAAAAAGGAGCTAATATCTTCTTCTCATTGTGCAGTCACTGGCAATGTGACCACCAT
TTATTATATAGAAGAACATGGAGACCCTAATGAAGGTTGTGACCCTAATGATGAAGACTC
TACTGAACCTCAATACCTGATAAAGTGGAAAGGATGGTCACATATTCACAACACATGGGA
ATCTGAAAAGACAATTAATGATCAAAAAGTTAAAGGCTTAAAGAAACTGGAAAACTTTAT
TAAGAAAGAAGTAGAAATCTCATGGTGGAGACAGCAAGCTGGACCTGAGGATATAGATTA
CTATGAGTGTCAGTCTGAACTACAGCAAGAATTAGTTAAAACCTACAATAACGTTGAAAG
GATAATAGCTGAACAAAATCGTGAGCTAGAAGGTGGTGGAACTGCTCATGAATATTTTTG
CAAATGGGAATCTCTTCCATATGCTGATGCAACATGGGAAGATGCAGTTTTAATAGAGAA
AAGATGGCCTGTTGAGGTGGAGCACTTTAAAAGTCGAGAAGCTGCTAAAAGTACTCCATC
TAGGCATTGCCCTGTATTGAAAAGGCGACCCAAGTTTCATCAGATAAAAGAACAACCTGA
ATACGTGGGAAAAGATTCAAGTTACCACTTGAGAGATTATCAAATGGATGGATTGAATTG
GTTAATTCACTCATGGTGTAAAGACAATTCAGTAATTTTAGCAGATGAAATGGGCCTAGG
CAAAACGATACAGACAATTTGTTTTTTATACTATCTCTTCAAGTCGCAACATCTGTATGG
ACCATTTCTTTGTGTAGTGCCTCTGAGTACAATGACTGCCTGGCAAAGGGAATTTCAGCA
GTGGGCACCCGACATTAATGTTGTTACTTATATTGGTGATGTTAGTAGCAGAGATATAAT
TAGGCAGTTTGAGTGGAGCTTTTCTAGCTCAAAAAGACTGAAATTTAACGCAATATTAAC
CACATATGAGATTTTGTTAAAAGACAGACAGTTTTTAAGGTCTTTTAGTTGGGCTTGCTT
GCTTGTAGATGAGGCTCATAGGTTAAAAAACGATGACTCTCTACTATATAAGGCCTTAAA
AGAATTTGATACCAATCATAGATTATTAGTTACTGGTACACCTTTACAAAACTCACTGAA
AGAATTGTGGGCCCTTTTACATTTTATAATGCCTTACAAGTTTGAGTCTTGGGAAGACTT
TGAAAAAGATCATGAAGATGCTGCTACCAAAGGATACGAAAAATTACACAAACAGTTAGA
ACCGTTTATATTAAGGAGGCAGAAAAAAGATGTAGAAAAATCATTACCTGCCAAAGTGGA
ACAAATATTAAGGGTGGAAATGACATCTATACAAAAACAATACTACAAATGGATATTAAC
AAAAAACTATAGTGCACTTAGAAAAGGCGTAAAAGGTTCAATTAACACATTTATCAATAT
TGTTATTGAACTAAAAAAATGTTGCAACCATGCATTATTGACAAAGCCAGAAGATTTCGA
GTCTAGAGCTTCTCTTGCTACTTCGGATGCTGTTGAGAAACTTCTTAGGGGCTCAGGAAA
ATTACTTTTGCTAGATAAACTGCTGTGCAGGTTAAAGGAGACTGGTCATAGGGTTTTAAT
CTTTTCTCAAATGGTCCGAATGTTAGACATTTTAGCAGAATATTTACAAAGGAGACATTT
TCCTTTTCAACGTCTTGATGGAAGCATTAAAGGTGAATTGAGAAAACAAGCACTTGATCA
TTTTAACGCTGAAGGTTCGCAAGACTTCTGTTTTTTGTTGTCTACTCGTGCTGGTGGGTT
AGGTATTAACCTTGCCACTGCAGATACTGTGATAATATTTGACTCAGACTGGAATCCTCA
AAATGATTTGCAAGCACAAGCACGAGCACATCGTATTGGTCAAAAAAATCAGGTTAATAT
TTATAGGTTAGTGACTGCAAGGTCTGTTGAAGAAGATATTGTAGAGAGAGCAAAAAGAAA
AATGGTTTTAGACCACCTGGTAATTCAAAGAATGGATACTACTGGAAAAACTGTGCTGAA
CAAACGGGATGCTTCAGGGACCACAGCCAATAATCCATTCAATAAAGAAGATTTAAATGC
TATTTTAAAATTTGGTGCTGAAGAGCTTTTTAAAGATGATGAAGAAAATGATGAAGACCC
AGTTTGTGACATTGATGAAATTTTGCAAAGGGCTGAAACCCGGGATGAAGGTCCTGCAAT
GGTGGGTGATGAGTTACTGTCAGCTTTTAAGGTGGCTAGTTTTACTTTTGATGAAGAGAA
AGCTGTCAATGAACTGAAGAAAGATAATGCTGATGAAGAACCTAAAGACTGGGATGACAT
CATCCCTGAAAATGTTCGGAAAACAATAGCAGAAGCAGAAAAATTAAAAGAAATGGAAGA
TATTTATTTGCCACCTCGAAGAAAAAATCAACTACAAAATAATGCTGATGGTGGTAGAAG
ACGTCGCGGTCGTTCTGGTGATGGTGGCGATGGCGATGGTGTTGATGGTGACGGTGAGGC
TGAAAGCGATGCATCTGATGGTGAAGCCAGTGCTGATGATGATCGACCGAGAAAAAGAGG
TCGTCCTCCTGCTTCACATCGGGAGAAAATCAAAGGCTTCACAGATCAAGAGATAAGACG
TTTTGTGAAAAGCTATAAGAAATTTTCCGCGCCACTGAAGCATCTCGACAGTATAGCGTG
TGATGCCGAATTACAAGAAAAACCATTAGCTGAGCTAAAAAGACTGGGTGAAATACTGCA
GGAAAGATGTAAAGCTGTACTTAGTGAGACAGCAGAACCAAGTGAACAAAATGAAGGCCG
TAAAAACAACAGGAAGACATTTAAACTCGGAGGAGTACCTGTAAATGCGAAAACCCTAGC
TGCATGTCAAGATGAGTTGGCAGCTTTGGATGACTTTCTGCCACAAACTAAAGAAGAACG
TCTCAAGTGGCAACTAGATTTTAGGACGAGACCAGCGAATTTTGATGTTGAGTGGAATGT
CTCGGACGATTCAAAATTACTAGCAGGAATATACCAATATGGTCTGGGATCATGGGAAGC
AATAAAAATGGATTCTTCTTTCGAAATAGGAGATAAAATATTAACGAATGAGGATAAAAA
ACCTCAAGCAAAACACCTACAGTCGCGAGCAGAGTACTTATTAAAGCTTATTAAAAAGTT
ACTGGATCAAAAGAATGGAAAACAAAAAATGAAAAAACCTCGACCGAAGAGGGCAAATAA
AGAACCGGTCACCAAAGATATTGTCGAAGATGACGGTAGCTCAGCTGAAGATAAAAAAAC
TAAAGGTGTTAAAAATGATAAAACTGAAAAGGGTAAATTAAAAATTGAAGAAGTTTCTAC
ACATGATGAAACTTCTAACGATAAGAAAGAAAAAGACAAAAAACGTAAAAAAGACGAAGA
CCGCAAGGGTGACAAATCTAAAGGACGGAAGAAACCACGACAAAGAGGAAATGAAGGAAT
ACCAGGTCCCATGCATTTTACTGCCAACAATGAACCAAGGGCCTTGGAAGTCTTAGGAGA
TTTAGATCCATCAGTTTTTGAAGAGTGCAAAGAAAAAATGAGACCAGTTAAAAAGGCTCT
AAAGGCTCTCGACAATCCAGACCAATCTTTATCGGAAACTGAACAAGTGTCAAGAACCAG
GGCCTGCCTCACCCAGATAGGTACTCAAATAGATTTGTGTGTTGAAGCATATCCAGATTC
TCAAAAAGTAGAATGGAGAAGTAATCTCTGGTACTTCGTTTCAAAATTCACTAACTTTGA
TGCAAAGCAGTTGTACAAGTTGTACAAGTATGGCCTAAAGAAAAATGAAGCTTCAAAGCA
AAAAGATGGGAAGCATAAAGAAAATGTCAAGACAAATAATCGTAATAATCATAACTCCAT
AAACCATTTAAAATCATTCAAGAAAAATTCAAATTCAAAGCAAAAAAGTGATACAAATGA
TAAAAAAGAAAAGAAAATGAAGCTAGAAAAGGAGAAAACTGATAAGCACGATAAAAACCA
GCATACATCAGGGGTCAAGAGAAAACTAGAAGATGGAGAATGTGACCCAGAACCCAATGA
TAATAAACGCCACGAAAGAACTAAACGCAGAGACAAGGATCGCAAGTATAAAGATGGGGA
CTTGAAGCAAGACGATTTGATGTACAGAGAACGGAGTCGGTCGGAACGAGAGAGGGATCG
TGATCGAGAAAGGGACAGGGATCGTGACCGAGAACGCGATCGAGATCGCGAAAGGGACCG
AGACCGTTCGCGGACACGGCGGGACAGCGGCGGCGCGGGGGGGCCGCGGGCTCGGCCTTA
TGTGGCACAGCACGCGCACGTCGAGCACCCCTCGCACCCTGCACACCCCGCCTGGACCCC
GCCGCCCTATCCCGGGCCCCGACAGTACCGCGGAGACCGCAATCAGAGACAACACGATAA
AAGAAGTAGGTATGGATTCAGTGGCATGGCAGGTCCATACGGTGGCTATTATGATAGCAC
AACAACCATGGCTAGTGGTATGGGTTTTCCGCCTGTGAGGCCTTACGCAGACGACTGGAG
AGGATATTCACAGCCTGAATATGGCTACGATGATCGGGAGTACGAGCGTGAAGTTTATAG
AAGAGATTACGATAGACGCGCACCACCAACATGAGGATAGTGCGTTATTTGCCGATAATT
TGTAAATAATATATGTAAATAGTCCGTAGTTATTTCTTTGGACATCGGTTTAGCCGTTGC
TTAAAGTGTAAGTGACATGTGCTGTGTTTTTTATCTATGTGATAAGCGAAGCGCTGGTTC
AGAACTGATTAATAAATAAATAAATAGTGTTTATGTGAGACTGTACAGTAAATTTATTTA
TTGTCGTATCAGTCGATTGTTTTTGTACATATTTTAGACAATTACCAATAATTTTAAATT
AATTTCTAATGTGTCGCCAATTTTACGGTTTAAGTATTTTGTGTGGTCTGTTTTTTATTT
ATTCAATACTGTGTTATCATTATAATTGAGTAATTGATTTGACAGACAGGTGATATGCAT
AGTTGATAATAAAATGTACAAAGTTAGTAATTGTTTCTAGGAATGCATGTAATACAATCA
TGTGCAATCAATAATGTGTATAGCTTAAACAAAGAGGCACATAATCTTTTTTCATTGCAT
TTCTG
(5165 bp)

- SilkBase 1999-2023 -