SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10352_c0_seq3
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_nesprin-1-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006997 P nucleus organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
Transcript
Level		FPKM:1.43 TPM:1.57
ORF EntryO_BomoFB13300_complete:A_BomoFB_comp10352_c0_seq3
Sequence
(Nucleotide)
CCCGCACGCGCGCCGCGTCACGAGCGTCGTGCGCATGCGCCGCCACGTGCCCGCCGACCA
CGTTCAACGACACCACGATCGACTTGTGCGAGTCCAGGTCCAGCAGGAACTCGCGGTGGT
CCTGTATAGCGTCTTCGAGTAAGTCGTATTGTTCGGGCGGCTCGGTTCTGGAAGCTTCCG
TGGCTTCGGCGAACTGCAGCCACTGCTCCAGCCGCCAAAGGTCATTGTCCAGCTGTTTCC
AGTTCCTCTCCGAGCACAGTGGGCAGGTCAGCCTACCAGACTCGCTCAGGTTGTTGATTT
GGAGCTCCCTCTTCTTGGCTTGCGTCAACAGGTCTTCGTACCGCAACGAGAGAGACTCAA
CTTCCTTCATCATGGCTTCGTCCTCAGTCGCGTCGCACTCGGTCAGCAGCAGCTCCGAGA
GGTGCTTGGCCAGCTCTAAGGTCTGTCCGGGCTTGGCTCCGGCTTTGGCGATTTCTTTTG
CGGCCGCGGCCAGTTCGTCGCTTCCAGCGTTGTCTTTGAGCTGCTGCTGCAACGCGAGTT
CCAGCACTTCGAGCGCCTCCGAGGTGTCCCTCACGGCCGACGCCAGTTCAGCTCGGTACG
TCTCCTTCGAGGTGAGGGTGTCTACTTGTAGGGCTGCGTCCGTCTCCCATTTTAAAGTGT
CAACTTGAACGGCGGTGTCCACGTCGCCGACGACCTCTGCTCTGGCCAGGTCCAGTCGCA
ACCTGACATCCGCATATAAGGCGCGGTACTCTGCGACCATTTCAGAAACGCCTTGCGCTG
TCGAGACTTTAGCAGCCAAGCGATCGGCGTCATCCACTAATGCTTGACATTCAGCCAGTT
CTTTTTCAACCAACTCTAGCTCTTTTAAGGTGGCCTCTTTGTCCAAGGGAGTGGGAGCAA
GATGCAGAGCTCTGGTCAGTCTGACGTCGACTTCGGCCAACGCGACGACTGCTTTTCCGT
GTGCCGCCACGAACTGTCTGTGGACGTCTGCGCCAGCGGCGTCTACCCTGCCCCTGAGCT
GTTGCCAGCGACGGATCGCCGACCGCATCTTGGCAGCTTCGTCTGCCCCTTGGCCACGAA
GCTCTACGCCTCTTGCAGACGCTACGCGGCTGTATGCGTCCTCTATCCGCTTGAGGTTGG
GTTCTAATGCTTCCAAGTCTTTAATTACGGCCTTCGAAACCGTTTCATCTTCATGTTCAC
CACGTTGTTTTCGGGTTTCAATTTTCTCAACTCTCTTCTCGATTGAATCGAGTTTCTTGA
CGAATTTAGGTAGAACAGACGAAGATAGTTCGGCAGATTTACGAATTTCTTTCAGCGTAT
TCTTGCGATGTTCAGAAGTGTCGCAAATATTTTTCCATTTCTTTTCGACGATGTCCACTC
CGGTTCTTAAGTTTCTGAGATCGAAGTTACCTTTGAGAACATCGGGGTCGTTGAACACAA
GATCGCAGAGATTCAAAGTTTCACACACCTCTCCACTTTCGGCTTCAATTTCTTTATGTG
TATCGTCTCGTTCTTTGAATTTCTCATCCACGCTCTTTGTCGTTAGGTATTCTAAGATAA
CAGTCGTTGTCAATTTCGACTCTATGACGTGTAGTTTTATTCTGATTTCTGTAAGCCTCT
CTTCGAGCTGTGTTATAGTTTCTAGTAATTCAGTAATTTTCACAATTCTAGATCTACCAG
TTTCCTGGAGTTTTCGCCATCTTTCTTCCATGTCCTTCAACTGTTTTGACGTGTTTTTGC
TATATGACTTTTCCTCTTTCTTTGCTACCTCTATAAGAGAGCTACCGGTTTCAGAGAGCC
ATTCAAATTCACGTTCCTTCATAGCAGTTTCTGCTTGAACATCAGCGTTTAGCCTTCTGA
TCAAATCGTGGGGATCTAAAGCGGTGATGTCGCTACTGCTACTGCCCGAAGTCTCTAAAC
GCGTTTCGACAGTTGTAATCCATTCCGTGAATCGTTTGAATCGCGTATCAAATATGGCGT
AAATTTCCAGTCGTTCTTGAAGTCTGTGAATGATGATAGATAGTTGATGTTCAAGGTCAG
CGCGTTGTTGCCTCAGTTGCCATATTCTTTGGTTCACTATTCTCATATCCTGCGGACTCA
GGCATTCTTTCAACTGTTCCTGGATGACGCTCAAAGCCTCAATCTGCGTTTCGCTCTTTT
CGATCTTTGTCCGTAAATCTGTATATTTATCAATAATTTTTTTGAGTTGCGGTCGAGATA
ATTTCTCCTCGTCAGTATATGAACTAATGTCGTCTTGTGTCTTTGAGTACATTTTGTGTA
AATCACTTGTCAAGCGTTCGTATTCACCGATCAGGCCTAGAATTCGAGTTAAGAAGTCTC
TCCATGTGTCGAGGCTAGCTTGCAGATTCTCGACTCTCTTCACACTCCCGGCGTATTCCA
TTTTGACGGAGGCTCCATAAGCTTCCTCAGTAAACTGTAAGACTTTCTTGAGATTGACTA
GAAGTTTATCAGACTGTTTGCGGCCTTCGGGCACTTTGTCAGCGAGATTCTGTATTTTGG
ATAAGATCTTGTGTATCCTCTTCATGTGAACGTATCTGAGTTGCAGCTTTTCTTTTTCGC
GTTCCATTTCTTTAAGCCATCTCAATAGTTCTGTGTAATTCTCTCTATAGTCGTCCCAGG
CTCCGATGCGGGCGCACACTTCATCGTGTCTTTCGACAATTCTCGCTAGGGTTTCATTGT
GGAGATTAGTAAGGGTGTCGAATTTGTCGGCCAAGTCCTTATTCTTAGTATCCCTGTTTT
CGTTTATTAGGACTGAGCGTTGCGAAGTGAGTAGATTTCTGTGAACCCTGCACAGACGTT
TGTGCTCTGTTAGGTTTTCGTAATCTGTTGGAACTCCGCTTGACAAGAACGACTGTAAGT
CGATCAAGTACTCGTGCCATAGTCTGAGCGCAGTGGCCGCATCACCAGACCTAACCAGGG
CGGTCGATAGCCTGTGGTAATGCAAGAATGTGTCTCTGAACATAGCCTGCCATAGTTCCA
AGATCCTAACGATCGAATGTTCTTCGGAAACGTCTCTATCGATGTCGGGCAGTTCCGCCG
TGGCTGGAGCGATGTCCGCTTCACTCTTACCCAGCGCGATAAGGTTTTCTCGTAACGCTA
TCAGTTTGTCTTCAACGATTTCTCCGTCTTCGTGCAGCGGAGCCAAGTCCTGTCTCATGT
CACATAGTTTCTCTTTGGCGTGCTGCGCTTTAGCTCGTGCGCTCTGCCGGGCTTCGCCCA
GATCCGCCAGGACCTGGACAGCGCCGGCGACCAGCTGCAGCCTTCGGGCCAGTGCGTCAG
CGTCGGCCTGGAGAGCCCTAGATCCAGTTTCTGCAGCGACTCTCGCCGCCAATGATCGGA
GTTCAGCTACCCTGGCTTCTTGTTCCAAGCATGCCTCTTGAAGTGACATTTTCGTATAAT
AAATCACACAGCGAGCCACTGACACATATTTCTTATCGCATCACCATAATAATAAAGAAA
AAACAAAATCATATCACACATTTGACAAGGACAGTTATAAAATATCACAAGTGATTAGCG
GTGTTTCGATTCACGAGTTTTTAGCTTTGAATTGTTAATTGTCATGGTAATTTGAGGGTA
TTTTTGATTTGATTTTTATATTACTATTATTATTTTAAATACAAACTCTTTGTTACACCT
GATGTCATTCAGTTTCTGATAAACCTAATTCGTAAAAATTTTTCAGAATTGATTTTTGAT
AATAGTCACGATCGTGTTCTAAGGTCAGGGCTATTACTGTATAAACAAAGTTTAATCGTC
TTAATTTTCAAATAAAATTATGCATACGACGAATAAGTTTGTTTCCACCACACAACCTGA
CCTTGTTATTTTACGAGATATATACTTATAGGAGAGTACGCGGATTTTTGCACAAAAATT
AACGCGCCATTATAATGTTAATCGTTTTTCATTTAGTATTCGAGTGTTTTTTCGGTATTG
TTCGTTTTATTTGTTCGCGTTTTCATGTGATCGGCGAAAGCGTCCTCGCGACGGGACGTC
CGCGCGAGATCGGA
(4034 bp)

- SilkBase 1999-2023 -