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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10317_c1_seq6
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_extended_synaptotagmin-1_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0008429 F phosphatidylethanolamine binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031210 F phosphatidylcholine binding
GO:0031227 C intrinsic component of endoplasmic reticulum membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0044232 C organelle membrane contact site
GO:0046872 F metal ion binding
Transcript
Level		FPKM:5.74 TPM:6.29
ORF EntryO_BomoFB13114_complete:A_BomoFB_comp10317_c1_seq6
Sequence
(Nucleotide)
AGCTTTAACAATTACAAAATACGTAATAGTAACACAGACAATAAAATTCTACAAATTCAT
AATATGAAGTTTGAATTCCGAAACACATAAAATTTATCATAATTAGTTATTTTTGTGGTT
TTATTAAATTTAATTTTTTTTTCACTTTTAACAAACAGTAAATGGATTCTGGGTTGGTTG
TGACAATTATCATAATATTACGTGATTGTAATCATTATGCTTCCATTACTTGAATTTTTA
AAAAGCTTTATAAGCTTGCAGGCTAGTTAGATATGGCAAAGCATGTTTTATAATTATTAT
TTTAAACTTACGATTGGGCCATAAGCCCACAATTTTTTTTTACATGGCATAATGACCCAA
TTTTCGTTATTTTATTAGTGTTTGAGAGTTTTATGAGTGAATCGTTTAAAGCCATTAAAC
TTATAACATATTCAGATCAATATATAGAAATTGATTTGCACGTCAGATCCGAGTTGAAGT
TACAATAGTACTTATTAGATTATATTCGTGTAGTGTTATTAATATTTAATAGATTCATAA
GTACATCAAACTTCGAAATTGCATCTCTTAATCTCTAGGGGATGTTTCAGGCATAAGATC
GAACCACAGGGTTTTAGCTTCACGGAAATCGTACTGATTTAGATGGACTACAACCTGTCC
AATGACCGGACTGCCAGCCAGGAATCCCTTGTGGGTGGCAACAGTGACTTCGACTTGCCT
GGAGTGAAGCTCAGCTAATGGAATCACCCATTCGAATTGTTCGTCATATTCCGGCATACA
GCTGTCTTTTACCACCACTGTCTTGCGTTTTGAATCTTTAGTTCTACCCGGCAGTAGATA
CAATTTAACGTACGGATCGGGCACATTTGTAGGATCTTTCAGCGGGATATTCATTATCTT
GTGAACAACAATATATAATGTTTGATTCTGCATACTATAGCGCAGAGAGAGTAATATGCG
GCCCAGACCGGCTTCCCCAGCGGAAGTAGTTAATGACGAAGTCCTGTGGATGAGTTTTGG
AGAGTCGCGTCCAGATGGAGGTTGGTTCTCTTGAGGAGAATCGACTTCTTTATCAATTAT
TTCCTCTGGCACGGATCTCTGCGAGGCGTCGTCTTGTACAGAATCTTCAATATTCTTTAA
TTCAGTATCACCTGATGAAGCAGGTTGTGCAGGCAGCGAGTCGGCGGGCGCGGCGGACTG
CGGGCGCGGGTGCGAGGCGCCGCCGTCCGTGGTGTCGGTGGCCGCCGACGACACGGAGGG
GCTCGGGGTGGGGGGGCTCGGCTCCGCGACCGCCGCTTCCAAACTCTCTTCGTCAATATC
GACCTCTTTTATGGCTTCTTTGAGAATCCTCAATTGTAAGGACAGTATGATTTTGGACTC
GGGCCCAGATTTCTGCAACATCAGCGGCTGAGTCAGCATCGTCAGATCTTTTTCTTTAAG
CAAAGCGGAGATGCTATAGAACAATTGACCGAGTTGGCTTCCAGTTTTCTGGTCGAGAAC
TTTGACGTCAAGCGTGTCGATTTCAGGGTTCTGGACGAGGAAAGAATATCCGATCTCATA
CACGGGATCATCGGTTCGCAGTTGCACGGCGGTGTTTTCGGTTTTTTTGCCAACCGTCAC
CATCAGGTAAGGGTCCGGACGGGATTGCACACGGGCGTTCGGTAGCTTCTTACACGAGTC
TATGTAAACAGAGAGTACTGCTGAGCTCAAATCTCCCGTCTTGATAAGGAGAGTTTCCGT
CAGTGCTCGACTTAACTCAGTTACATCCGTGGATAAACGATGCCAAGATAATCTCAGTTG
GACTTTACCGTGCTTCGCTTGTTGCAAGGTCTGCCAAGTGTCCAAGCGGCCAAATCGAAC
TACTTGAGATATGTCCAATGAACACTTGCCGAGCTTGTCGTCGTCGTTGCCTTCGTCCTT
GTCGAACACCTCTATATCCAACATCTGACCGAGGGATTGCATTATACGCGCCTCACACCA
GAAGTCCCATCGCGGGTTCACGTTGTTATCAATGTGCTTCGTTTTCCATTGCTGGGCGCC
CACAGTTATAACTGCATACGGATCTGACTTGCCTTTTCCTAGCATAGAAACATCTTTCTT
CATGAGATTCTGAGCTTGAACCAAATGTATGCGAAGTACACCCTCCGGCTCAGGCATGCG
CAGATCAACCGTTGGAATCTCATCGCTTAGTTTGATCGAAAGCTTGTTAGGCAGCACCAT
CATTTTGGACACTTGCTCCACGATGCATCGACGAAGTATATCACTAAAGCCTGGCATATC
TAGTATGTCAGCTGCGCCAACGAGATTGAAGTCGATTGAGGGGTTGTTCAAAAAGAAGAT
CTGTAGTCCTCCGACTAACGGTATTTTAGAGATCAGAGGTTTCATTACAACACGTACCAT
GCCGTGAATTTGGAGATCTTTGATTCCTCCGCGAATGCGTTGAAGTACGAATGAGATGTC
GCAATCGCCGGCGTAGAATAAGTCTATGTCCATGATGATTTCATTCCTCGAGAGATTCTT
ATCATAAACCTTGACGCCACCAACCCGCGGCGCAATGGTACCGAGAATCATACGTTCAAA
TTTAAATCCGCTGAGTTTGTAATTGGCCAGGCTCTCCGCGACAGCCGGTTCGATCAAGTC
TTTCAATAAAGTCTTTGCGTAGCTGTTCACATTCGGCCAGACTTGTAGGAGTATCCTGTT
CAACCATTCGGCTCGTTCGACGTCCGGGAAGAATACCCATGAAGGCAAGTCGTCAAGTCT
CGCTAGTATCACATCTTTTTCAGAAGACAGTGCAGCGACCTTTGCGATGTTGCGTTTGTA
TTCGTTCTCCTTGCGCCATTGATCGCGCATCACCGACAATATAACGGGCCCAATAAGCCA
CGCAACGCTCCATTGCATATAACCTACTAAGTACACAGCTCCTACAATCGACACCTTTTT
GAGAAATGTGTACATCATAGAAAAAACACTGTTGCCATCATCACTGCCTGGTGGTAAGGC
AGTTTTGCTTGCACCTGCCATGTTATTATCACTGGCCAATTTTAATCATTACATTCCGTT
GATAATATTTTCTCGTAATTCGTAATACAAAGCACGGTAGACACGATTTTGATAGCTTGT
AAATTCAGTAAACTGATTATAATTCGACCTTTCAATGTTTTGGTAAGTTAAAACCATAGA
CCTAGGTTTCCTACTTCAGTGGTAACAGTAGTGAGTAATAAATAATAATTTGAGTGTTTA
TTGATGTGAGCGATTGCTCGTT
(3262 bp)

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