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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10294_c0_seq1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA-splicing_factor_SPF27_[Papilio_polytes]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030054 C cell junction
GO:0071011 C precatalytic spliceosome
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:11.87 TPM:13.00
ORF EntryO_BomoFB12823_3prime_partial:A_BomoFB_comp10294_c0_seq1
Sequence
(Nucleotide)
ATGCCATAATGTAACCAGTTTTTTTCACAATATTTTATATTAGATGTGTTATGCTATCGA
TTTTGTATATTCCCATACCAAAACGATTTACTTGCGATTCATGTAACAGTTGATTCTTGC
AACATAAAAGCCATAAGGGCGGCTCCACTTGTTGTACCTATCAATGGCCAAAACACTACT
CCAAAGTTCTAAAATTCCTTTTAATCCGCAAACATATCTTCAATTTTCTTTTGCACTTCC
TTCTCTGTTTCCGAATTGAGTTTTTCAGGTAACTTTACAATGTCCAAATCGGCTTCTTCT
CCTTCTTCTACTGGTACTTCTCCCTTTGCCTGTTGTAAGTGAAGTAGGGCTCTTTCAAGT
CTATAATTGTCCGAGACAAGTTGCGCCCACCGTCGCCTCAATGCCCGCAACCTCGCACCG
CTTGCTGTTTGTACGCGTTTACGTTCCCAGTTCACAGAGCCTATTTGTTTACGTAACTGG
TTGTGTTCGTTTTGAGCTCTTGTGACTAATGCTTGAAGTGTATTGAGGTATGATCTCCAT
GCTTCTGAACCGTACTCTAACTGCAACTCTAAATTGAGAACTCTGATAGCTTGGTGTGAC
AGCTGTGCATGAGAGTTGTCAACTGACTCGGCCCAGGCACTTGGTTCACTCATTCTTCCG
ACTGGAGGGGGTGGAAGTTCATACCTCTTCATAGACAATGGTTCCATCGGCAATCTCTGT
TGCACTCTTTCCATCTCTCGTTGTAAAGCAGGAGTTTCAAATGCAGAACTTGGTTCTGGT
CCTGCATTTTCAAGATAGTTCTTTGTGGGTCTATAGCGTCTGCACTCTTCTTCCACCATG
GCCAATGCAGCTTCTCTTACTCCAGGATCGTCATATCCTTGGTCTATATATGGTAATGCA
TCTACGACAACTTCTCCTGCCATTTTCTACAAAATTTATAACTCCCTTTACTACGAATGG
GTACTGTGATTTATCACTTTATATTAAAGTTTTAACGCTGTTCTTTGTTTATTTGATTTT
AGTTGTGTCACTTG
(1034 bp)

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