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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10292_c0_seq4
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		transient_receptor_potential_cation_channel_subfamily_A_member_1_[Bombyx_mori]
Ontology
GO:0001580 P detection of chemical stimulus involved in sensory perception of bitter taste
GO:0005216 F ion channel activity
GO:0005261 F cation channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006816 P calcium ion transport
GO:0007602 P phototransduction
GO:0007638 P mechanosensory behavior
GO:0009408 P response to heat
GO:0009416 P response to light stimulus
GO:0010378 P temperature compensation of the circadian clock
GO:0015276 F ligand-gated ion channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
GO:0023041 P neuronal signal transduction
GO:0033038 F bitter taste receptor activity
GO:0034220 P ion transmembrane transport
GO:0034605 P cellular response to heat
GO:0034703 C cation channel complex
GO:0040040 P thermosensory behavior
GO:0043052 P thermotaxis
GO:0046957 P negative phototaxis
GO:0050850 P positive regulation of calcium-mediated signaling
GO:0050896 P response to stimulus
GO:0050960 P detection of temperature stimulus involved in thermoception
GO:0050965 P detection of temperature stimulus involved in sensory perception of pain
GO:0050968 P detection of chemical stimulus involved in sensory perception of pain
GO:0055085 P transmembrane transport
GO:0097604 F temperature-gated cation channel activity
GO:0098655 P cation transmembrane transport
Transcript
Level		FPKM:0.33 TPM:0.36
ORF EntryO_BomoFB12792_complete:A_BomoFB_comp10292_c0_seq4
Sequence
(Nucleotide)
GGTCGTTGTTGATGCCCGCGTCCCAGCCACATAAATAATCTCGGGTCAAGTCGATTTATC
ACACTGCTCGAAGTCATGACATTTTGTGGAACAACGGGCCTATCTTAAATATAATCTCTA
AAAGTGTCCGTTATGGGTTCGTTCAATCAATCGAGACGTTTGAAAAATTTGCAAAATTTA
AAAAGTGGCGCGATGAAACTTCCCCGTCATTGGTCTAAGATGTTGGGACTTGTGAACATC
AGTAAAGCGACTATTGAGGAATTATTTCAGGCTGCTGAAAGCGGAAATGTCGATGACTTC
ATGCGATTGTACCTCAGTGAGCCTTCTCGTCTTGCTGTGCGCGATGGAAGGGGTCGTACA
GCTGCACATCAAGCCTCTGCTCGAAACAACACTAATATATTGCATTTCATCAATAACTAC
GCTGGAGACCTTAACGCTAAGGATAACGCCGGGAACACACCGCTCCACGTGGCTGTCGAG
AATGAAGCCCTCGACGCTATAGAGTATTTGTTGCAGCAACACGTCGAAACTTCTGTCCTC
AACGAGAAGTGTCAAGCTCCAATACACATGGCAACTGAACTAAATAAGGTATCCGTACTT
CAAGTGTTTGCGAAGTACAAGTCCTTGTTCAACGTCAACCAAGGTGGCGAACACGGCAGA
ACGGCTCTTCATTTCGCTGCAATACACGACCACGATCTCTGCGCCAAAATATTGATAACC
GATCTGGACGCTGAATGGAAGAAGCCTTGCAACAACGGTTACTATCCCATTCACGAGGCG
GCAAAAAATGCTTCATCAAGGACTATAGAAGTGTTCCTGCAGTGGGGCGAACAAAGAGGG
TGTACTAGGGAGCAAATGATTTCCCTTTACGACAACGAAGGCAACGTCCCTTTACACTCA
GCCGTTCATGGAGGTGATATCAAGGCCGTAGAGCTGTGTCTTCGATCCGGAGCAAAAATA
TCCACACAGCAACATGATCTGTCAACACCTGTGCACTTAGCTTGCGCTCAAGGAGCACTC
GACATCGTGAAGTTAATGTTTACTATGCAACCAAAAGAGAAGCATGCGTGTCTGACATCC
TGTGACGTACAGAAAATGACGCCTATTCATTGTGCCGCCATGTTCGACCACCCGGAGATC
GTAAACTATTTAATCAACGAAGGCTCTGATATCAACCCTCTGGATAAGGAGCGAAGGTCC
CCTTTACTTTTGGCTGCATCTAGGGCGGGATGGCGTACGGTTCACACTTTGATACGCTTG
GGTGCTGACATACAACTAAAGGACATAAACAGTCGCAACGTGTTGCATCTGGTCGTCATG
AATGGTGGTCGCCTAGAGGATTTCGCTGCGAGCTGCAAGGATCACTGCGAGAAAAGTCTC
TTACAACTGTTGAACGAAAAAGACAACACCGGGTGCTCGCCACTACACTACGCGAGTCGT
GAAGGTCACATCAGGTCTTTGGAGAACTTGATACGCTTGGGAGCTTGCATCAATCTCAAG
AACAATAACAATGAGAGTCCATTGCATTTCGCTGCAAGATACGGACGCTTTCACACCGCC
TGTCAACTCCTCGATTCTGATAAAGGCACTTTCATTATCAATGAGAGTGACGGCGAAGGC
CTAACTCCTTTACATATAGCTTCACGCGAAGGACATACAAGAGTCGTGCACTTATTATTA
AACCGCGGGGCCTTGCTTCATCGAGATCATAATGGAAGAAACCCTTTGCATCTGGCCGCT
ATGAGTGGATATACAAAAACCATTGAACTGTTGCATTCTGTTCATTCTCATTTGTTGGAC
CAGATTGATAAGGATGGGAATACTTCTCTTCATTTGGCCACAATGGAGAATAAGCCGTCG
TCCATTGCTTTGCTATTGTCTATGGGCTGTCGACTAAGCTATAATAATATGGATATGAGC
GCAATAGATTACGCTATATACTACAAGTTCCCTGAAGCCGCTCTTGCTATGGTCACTCAT
GAGCAAAGAGCCAAAGAAGTTATGGCCTTACGTTCAGATCGCCATCCTTGCGTGACCTTG
GCTCTCATCGCCTACATGCCGCGAGTCTTTGAAGCTGTACAAGATAAGTGCATTACCAAA
GCCAACTGCAAGAAGGATTCAAAAAGCTTCTATATCAAGTACAGCTTCGAGGCGCTCTGC
CCTCAATTGATGGACGAGGACGGAACTAGGAAATCTCAACAGGCCCAGCAAATACCTTTA
CCGGCTCTCAACGCGATGGTAGCACACGGGCGTGTAGAGCTATTGGCGCATCCCTTGAGC
CAAAAATACCTGCAAATGAAGTGGAATTCCTATGGAAAATACTTTCATCTCGTGAATGTG
CTGTTCTATTGTATTTTCCTGATCTTCGTCACTGTGTATTCATATCTTCTGATGGAGCAC
GTGAATCCAATAAATAAAAGGGAAAGGAGTCGGGTTGGTGATGTCTATTACAATTACACC
GCTACAAATCGAACACAAACAAACTGGGATATTGATGCAGATTTCGAAGCCATCTTAATT
ATGTATACAAGCTCTGTGGTTATTATGGTTTATATTTCCGTCTGTATGATGCGGGAAGCA
TATAATTTAAAGCAGCAAAAATGGCATTACATAGTGGACCCATCTAACCTTGTATCTTGG
ACATTGTATATTAGTGCCACTATAACAGTATTTCCAACTCTCTATGGACATTATAGTAAT
TATCAGTTCTCAGCGGCATCGATAACCGTATTCCTGTCTTGGTTCGAACTGTTATTGCTG
CTCCAACGTTTCGATCAAGTCGGGATCTACGTTGTGATGTTTCTCGAAATACTCCAGACT
CTCATCAAAGTGTTGATGGTTTTCTCCATTCTGATCATCGCGTTCGGCCTGGCCTTTTAC
ATTTTGCTCTCTAAAGTGGGTTCAGTCGAAATGGGGAATCACCTTTCTTTCAGCAACATC
CCTATTGCTTTGATGAGAACATTCGCTATGATGCTTGGTGAATTAGATTTTGTCGGAACT
TATGTGCAGCCCTACTACAAGGATGACTCTGATATAATTCTGCCTTTCCCGATACCGACG
TTCATAATCCTTGCTCTGTTCATGATTTTGATGCCCATACTTCTAATGAACTTGCTTATT
GGTTTGGCCGTTGGTGATATTGAGAGTGTTAGGAGAAACGCTCAGCTGAAACGGCTGGCT
ATGCAGGTCGTCTTACATACCGAACTTGAAAGAAAACTACCAGCATTCCTATTGGAGAAA
GTCGACAAACTAGAACTGATCGAATACCCAAATAATAAGAAATGTAAACTCGGATTTTTG
GATTTAATCTTGCATAAATGGTTTTGTAATCCTTTCACAGAAGATACTGGCTTGGACTTA
GTTTTGGAGAACAACGACGATTACGTAACGGAACAAATGGAAAAGCAGAAGCGTAAATTC
CGTGAGATGCAGAATGTATTGGACCAACAATATTTACTACTCCGGCTAATTGTGCAGGTA
TTGTTTAGAAAATAATTTCTAGGTAATCTTTGATCAACGGAAGTAGTAATCATAAAATAC
TAATACATGGTAAGAGCTATATTTTAAGATCCTCTTCCTTGCGTCGATAATCCTCATTGC
TGATGGTAGTGGCCTCCTTCTGATAACTTTATCTTGGATTATCCTGCGTCACTTCTTCCT
ATCTCCAGCTCGGCTGTGTAGATGGCAACGTTGACTGAAGTGTTGAGAGTAGAGCGTATC
TGGTCTGACCAGCGCTTTGGACTCGCTCGGGCTTATGTTTGACGTTTCCAATACTTTACA
GTTTACTTGTCACAGCAGACTAATATAGTGTATCATATTACTGTTGCTTGCGTTGTTAAC
AGATTAGTCTCGATTATATAAATTACTTATTTTTCAAGAAAATGGAAATCAAAACCGAAG
CCGACGATGTGGACGAAGGCGTATCGCCGAATGACACTAAAGTGGTTCCCCGCTGGAGCT
CTCATAGGAACCGCAAGAAGTTGCATTCGGCCCGAGCTGCTTCATTTAACAAGTCGACCT
GATTTGCGCATCTTTTTAGTTTCAAATTGAAATAGAGATATTTCTCATTCATCACAACAC
GTAGCTCTGAGATTTCTAATTTTTTTTTTATTGGGTCACACACGATTTGGCGGCGTGAAA
AATCGCAGTTTAAGCCTTTATTGCTCTCCAGTCACTCCGCAATCACGGCCTTAAGCACCC
GGTACCGGACACTTTAGAACGTCCTAAAATCACCTCCCTCAAATTAGACTTGCGGTACAA
ACAACAATATAAGCTGTAAAATATAAGTGTGATTCCACAAATGAATATACGACGTAGTCT
GGCCCGACAAGACTTTATTGATTAAACACGCAACCGACATCTTCAACATTGGTATCAACA
TACATCAACTTCAACTTCAACATTGTCTATTCATTAAAGCTTGTAGATAGCACAACATGA
ATCCCACCATATATCTCGAGTGCTAAAATCTAATGGTTAATGATTTGTGGCTTTGTGTGC
TGTGTGCTAGTGTTGTCTAGCTGTGGGATCTTACAATAACGTCTTACAGCCAGTAAAATT
TGGGTTTGGTCATATTAATTTTTTAAGTGTTAATACCGTCGAAATAGCATTTTATATATT
ATATGAGAATAAGAAGTAAAGATCTTACGTGGTATTTTTCTGTATTTCCCCTTTCCAACT
ACTGTTACTTCTCCTTAATTTGTCCGTAGTTTTGTTTCCCTACCTAATCATTAGTAGCCT
AAGGGGCTATTCTGGCGTTATGATTAAAGGTAAGATCACGGGCCGAAACCTGAAAGGATT
CGCTAATACTGGCCCTAGTAAGAGCAGTACTTCGCTGAATCTTCTACCAGATTGGATTCG
CGACCATTAGTCGGGCCATTATTGTGAAAGACGTGTAAAGAAGAAACAGTAGATACAACT
AGCATCTACAGCAGCATACTACAGCTTGGGATTTTTTTGCTTACCTCATCTAAGCTTAAT
ACCTTTTTTGGGAATTCTCTTTTAATTCTTTATTTAATTTTTGTCTCGTCGCTGTGTGTT
TTGTAGTGACTTCCGCTACTATTGTCCTGCACTAATGCACGTGTCATCAGGCTTAACGTA
GATTAATTATAATTAATATAATATTAATCACTTGTATTGGTGTCAAATTATTGTTAAGTA
TTTAAAGAACTATTTATTGTAATAGAAACGAACTATACGTACATTTATCTATTTTTAACC
GTTACAATCGGTTCTGAAGCTGCACTGACATTGCTGAGTTCCTATTATAACTCTCCAGAC
ATAATAATCATAGAATTTTTAAGCTATTGCATAGATT
(5317 bp)

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