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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10243_c0_seq3
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0016607 C nuclear speck
Transcript
Level		FPKM:3.62 TPM:3.97
ORF EntryO_BomoFB12590_complete:A_BomoFB_comp10243_c0_seq3
Sequence
(Nucleotide)
TTTTTTTTTTTTTCGTATTTTTTTATTTATTATTACTAACAATATGAAATATATGTTAAT
TAAAATCGTTTCAGCAAATTCATTAAAATATTTTAATAACATGCTGTACGTTCAATGAAA
TTTTTCTTAGAAGTCAAATAGAAAAAAAACCGAACACTAATCGGATCCAGAAACACTAGT
TTGTTTCTTCATCGACTTCAATGCTCTCTCTCTCAGTTTCTTTTCCAAATCTTCGTTATT
AACTTTTCCTTCTTCCTCTTCTTCCTCGGCTTCATCGCTATCAGAAGAATCCTCTTTTTT
CTTTGATGATTTCTTATGCTTCTTGTGTTTCTTATGCTTTTTAGAATGCTTCTTATGTTT
CTTATTTTTCTTGGATTTCTTAGGTTCATCACTGTCTGAATCTGACTCTGAGTCTGTTAC
CTTCTTCCTTGCTTTCTTCTTTGACACCTGGTCACTTTCAGAAGAGGACTCTTCCTTTTC
CCTCTTTTTAGGTTTTTTTCGTTTTCGTCACGAGATTTAGGTTTAGCATCGTCTACTTTC
ACTTTTGCTGGTTTATCCTCTACTTTCTTTAATTTAGCAACTTCTGGTGATAAGGCTTTT
TCCTTAATAGAGTCAGTTTTTTTACCGCGTTTTGGGTCTTTTTCTGAACTAGAAGTATCA
CGTTTAGGGTTTTTCTTCTTAGATTTTGCATCAGTATCCGAACTATCATCTTGGGAATCC
TCAGAATCGACTTTTTTGGACTTGAGCTTGTTTTCAACTTTCTCAGACCTTGACCTTTCG
CTACTCGCATCCTTGGCGCGTTTTTTAGACTTCTTATCAACATCAGATTCGTCGACGACA
TTTTTTTGTTTTGTCTTTGAAGCCTTGTGTTTAACTTCTTCTTCCGAACTGGAGTCGGAG
CTCGACGAGCGAGCTCTTTTCTTTCTTGATTTCTTGGCCAACTTCTTTTTAGCATTCTTT
TTGCTTTTCTTCTTCCTATCTTCTTCAGATTCACTAGAAGAAGATTCCTCAGAATCGCTA
TCGCTAGAAGAGCTCTCTTTTTTGAGTTTCTTATTTCTCTTAGATGTACCCTTCTCCTTA
CGCTTGATTTTGGACTTACTTTTGGATTTCGATAGCTCCTCGCTACTCGCACTTTCAGAA
TCTGATTGATGGGCTTTACGTTTAGCTCTTTTGGATTCCTTGGTTTTTATTTCGTCCTCA
TTCTGCTCTTTTCCCGAAACTTCATCAGATTTCTTATTTTTGTCAATTTCATGTCTTCGC
AAGAACGGTGATGGAGTGCGTGAAAGACTTTTTGAGTATTCACGCAGGTTTGGAATATTT
ACAATATCTTCTTTCTCTTCGTCGTCAGTGTGGTCTGACTGGGTTTTTCCGTCATTAAAA
GGTTCTGGTGGGGGTTTTTCAACAGCTACTGATGATTCTCGGCTTGTGCTAGATATAATG
CGCTCTTTAGATTGCTCACGCGGAATAGGCAGGTGCTCAGGCTTTTTGGGTAATTTGTCA
TTATTTTCTTTTCTCGGAATCGAGACAGATTTCTCTAAACGCTCCTTGATAATATCGCTA
GACCTTCTATCGCGAGATTTCCTGTCCCTGGATCTCCTGGAGCGATCGCGCGATTTCCGC
TCTCTGGACTTATCTCGTGAGCGGCGGTCTTTGGAGCGGCGATCACGTGAGCGTCGGTCG
CGTGACCTGCGTCCTGAGCGACGCCTCGACCGCGACCTGCGACGTGAACGGGAGCGGCGA
CGGTCTCGAGACCTGTCTCTTGAACGTCGTCGAGAGCGTGAACGCGACCGTCTGCGTCTT
TCAAGCGATCGTCGACGTTCTCTCGACCTCTCACGCCGTTCTCGTTCACGGCGTCGTCGC
TCTCTTTCACGTTCGCGTTCTCTTTCTCTCTCCCGTTCTCTTTCCCTCTCACGACGATCT
AACGACCTACGTCGGCTGCTCCTACGGCGAGATTTACTCCTTTCTCTTCGGGAGCTGCGC
CTAGGGCTAACACTTGTAGAAGAATCACGATTCGAACGGTATTGTCGTTTTTTATGTGAC
GATCTCTTCTTCACACTGCCACGGGATGAAGCTGAAGACGAGCGTCTTTCGCTAGATGAT
CGGCGCGACTTATCAGCAGGTTTCTCATCATTGGTTTTCTCTTTCTCGTCCGTTGACTTA
GCAGGTGACACAGATCTAGATTTCTGACCTTCAACTTCAGATTTCTCTTCAACGTTCTGT
GTTATGGTTGGTTCCTTGTTTTCATCATTGACAGGTTCATTGACAGTTGGAGAATTATTC
TGAACTGGTTCTTCTTTAACCTCTTCTTCATTCTTTTCTGGTGACTTACCGTTCTCTGCT
ACACTTGGAGCTTTGGTTTCCGGTTCAGTTTTCGCAGGGCTGACCTTGTCTCTGATCGGG
CTGCTGCGCCGTCTCGATCGACGCGGACTTCCGCCGTTACGATGCTTTCTGTCACTGGAA
CGATCACGAGAACGAGTTCGCGAGCGCCGTCGGTCGCGAGAGCGGCGCCGGGAACGCGAC
CGGGACCTCGATCTCCGTCGCTCCTTGTCTTTGTCCTTGTTCTGCTGCTCCTCCATTCTC
TTCTTTATTTCTTCTTTCTTCTGCTGAGTAAATGATTCGGGTATACCGTTTTCACTGGCC
TGCGCGCTCAGCAACAGCTCCCATAACTCTCCCATGAAAAGGCGTGCGTTCTTTCCATTT
AGGAATCCAGTCAAGTTGATCTGCATTTTCTTTGGGCATGGGAACTAGGATCCGACATAG
ATGGGATCAGGAAAAGAAAAAAATCGTATTAAAATCGCAAACACCTAAACCCCGATGTAC
ATAACGACGACGTCGATTACTGGGCAGGATTTGTACCATGTTGTACTCAGTATAATTCAT
CATCATTTTAATGTTCAAGATTCTTTCACTTCATGATGTGTTTAAAACGATTTTTTTTAA
TGGGTATATCTGGAATAAGATACTAAAGCCATTAAGAGTTTAAACTTATAAATATGCAAA
TAAGTGTAACAGATATGACTCAGGTAAGGAAGCAACATGAATATACATAATATGAAATGT
TTCATGTTTTTTAGAAGTCTTCATAGCGTGTCGAGTGGCGACGATGCAGAGATGATGAGG
GCGCAGCGAAGTTGTAGACCGATGTGATGCTCTGCATATGACGCCCCGCGCCAACACTCA
CCGCACACTCGCCCTCTTCAAAACTTGCATCTGTAAGGGTGTTGCGATAACAACCACATT
ATGCTGAACGCAAAGCCTAACGACAAAACTTCCTTGCACTGAGTCAAATCACCTCTTAAT
GGCTTTGGGGAACTAATACTCTAATTATGTATTTTAGTTATTTTCCTTTTCTGAAAACTC
TTCTTCATTTAATTATGAGTTATCTTGTAATTATTTAATTTTCCCCGTAAATACCGCAGA
TATGCTAAGGGCCTCCGAAAGAGCGTAGCTAGCAGGCAGCGTCGGGGAGCTGGCAGCACC
TTGCGGGGATGACTTCGACGGCGCG
(3505 bp)

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