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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10208_c0_seq2
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		geranylgeranyl_diphosphate_synthase_[Choristoneura_fumiferana]
Ontology
GO:0004161 F dimethylallyltranstransferase activity
GO:0004311 F farnesyltranstransferase activity
GO:0004337 F geranyltranstransferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006695 P cholesterol biosynthetic process
GO:0006720 P isoprenoid metabolic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0033384 P geranyl diphosphate biosynthetic process
GO:0033386 P geranylgeranyl diphosphate biosynthetic process
GO:0045337 P farnesyl diphosphate biosynthetic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.12 TPM:3.42
ORF EntryO_BomoFB12476_complete:A_BomoFB_comp10208_c0_seq2
Sequence
(Nucleotide)
GTGAAATCATCGCCTATCCAGTTGGAAAATTGGAACTACTGACTGACACTTGACAGTTTT
TCACGGCGAGAAAATTCTCATGCCTTACACATACATTCAGCAAGTACCAGGGAAACAGAT
AAGAACGAAGCTAGCTTCCGCATTCAACTACTGGCTCAAGATATCTGAAGAGAAACTGAG
ACTAGTCGGTGATATTGTACAAATGCTACACAATGCCAGTTTATTGATCGACGACATTCA
AGACAACAGCATCTTACGGCGCGGAATACCGGTAGCCCACTCCATCTATGGTGTCGCGAG
CACCATCAACGCTGCGAACTATGCTATGATCATAGCCCTCGAGAAGACTTTGGAGCTTGG
CCATCCATTGGCAACGACTGTATACACCGAACAGCTGTTGGAATTGCATCGAGGTCAGGG
CATGGAGATTTACTGGCGGGACAACTTCCAGTGTCCCTCTGAAGACGAATACAAACAGAT
GACCATCAAAAAAACCGGTGGACTGTTCATGCTAGCGATACGACTGATGCAGTTGTTTAG
CGAGAACAAATCGGACTTCACCAATCTGTCCGCCGTGTTGGGGCTGTATTTCCAGATCCG
CGACGATTACTGCAACCTGTCGATGAGGGAGTACACAGAGAATAAGAGTTACTGCGAGGA
CCTCACGGAGGGGAAGTTCAGCTTCCCCATCATACACGCCATCAGGAGTCAGGAGGACGA
CAAACAAGTCCTTCATATCCTCCGCCAAAGGACACGGGACGTTGAAGTGAAACGTTACTG
CATCACGTTGTTGGAGAAGTTGGGCAGCTTCCGGTACACGAGGGGGATCCTGAACGATCT
GGACGCGCGCGCCAGGGAGGAGGTGTCCCGTCTAGGCGGCAACCCACAGCTGGAGGCGCT
GCTGGACGACCTGCTCACCTGGAGACAGGAAGGCGACGACGCTAACGATCAAATGAACTA
CGTTTGAGCGCAACTAAAGATGAGCTTAATTTATTATAAATATAAATTATTCCAAATACA
AATAGTGAGGGTAGTTGAATTTGTTCCTTAAATTTTAGCGAAACTTTTGCTAGTGTTATA
AAACAGAAATATATATCGAGAAGTGAAGGGTTATTTGGTATAAGGGACATCTTTGAAAAA
TTACTGGTGGTAGGACCTCTGG
(1162 bp)

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