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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10205_c0_seq3
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_Niemann-Pick_C1_protein_[Bombyx_mori]
Ontology
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:1.04 TPM:1.14
ORF EntryO_BomoFB12456_complete:A_BomoFB_comp10205_c0_seq3
Sequence
(Nucleotide)
AGGTCCTACCACCAGTAAAAACTGTAAAATGCTGTAGATTACATTATTAATACACGTCAA
AGTTGGTCACACACACACACACAGGGGTGCTACATTTCGTCGGTGAGGGCGCTGCTCGAG
GGGTGCGGCTCGGCGGCCGTGCTCAGACTGCCGTAGGTGGGGCCGCTCCGGGACACTCGC
CAGCGTCCCCGGCGACGGGTTATGCCGATATAGCTGAGCATAACCGGCAGGAATACGAGT
CCGTGGGCCGCACCGAACAGCACAATCCCGAGGTACATCCGGAAGTAGAACACCTGGAAG
ATCTGGCTCTTGGCCGTGGCGAGCACGATGATGCCGCCGAACTTGGTGAGCGTGATGCCG
GACAGCACGGACGAGCCCATGCGCAGCAGCGCGTCCGCCGCGCGCTCCCCGCGCCCGCGC
CCCGCCGACACGCTGAACGAGTGCACCAGGTGCGAGCAGAACTCCACCGATATGCCCACC
GCCATCACCAAATTTACAAGCGAGACTGCATTCAAACTGATGCCCCACCAGTACATGAGG
CCGCCGAGATTAACAACAATCATAGTGATGGTCACTACGACTACAAGAGCCGAGAAGAGA
TCGAAGCCCATGAGCACGAAGGTGACGAAGAATATGGAGAGCACGGAGATGCCCATGCTC
TTGAGGGTGTCGGACCACATGGTGAGGTACTGCTCGTAGAAGACGTAGAAGACCGAGTAG
GGGAAGACGTTGACGGTGGCGGAGTGTCCCAGGTCGCGGAGGTGCGCGTTGAGCGTCTCC
GTGAGCGAGCCCGCCAGCGCGCGCGCCGCCCGCAGGCTGCCGTAGTAGTCCGAGCTGCTG
CGCAGGACCGTGTGGTAGCTCTGGTAGTAGGTGGCGCCGATCCCGGTGGTGTTCTGGCTG
TGCGAGCGCAGGTTGACGGCGTGCGAGTAGGCCGCGTGGCCTCCCTTGACGCAGCGGCTC
GACGGGTTGTCCTGCAGGAAGTACGGCAGGTACGTGCTGAAGTCCTGCGGGCTGGGACGC
TCTTCCGGCTGCACCAACTTTATGTTGCAAGCGGCACAATCGTCGGGTTGAGTGTCGCTG
GGACAGAAGCTGTTGTTGGACTGGAAGTAGAAGCAGCACTCCGGTGAGACAGACCAGTCG
AAGAAGTCGTCGAGCCAAGAGTTGGCTGGAGCCGCGATGTACGTGTCGGCCGGGCTGCGG
GACGCAGCGTATATCTGCATGGCGAGACTGTCGGGTCTACAGAACCTCGAGCCGCACAGC
AAGTTCTGCACGTCGGGGGTGGAGTAGTTCAGCTTGGCGTCCGTCTCGGCGTCCGTGAGC
ACAAAGTAGACCGGCGGACCGATGTTCAGGTAGCGGTTCAGATGCTGGAAGTACTTCAAC
TGGAAACTGTCGTGGGGCATAGACAGCTCTTGGTCTAGTCCGATGTCGATGTGAGGCGCT
ACAGCAACAGACGAGCAGAGCCAAGCAAAGAATATAATCATGACTGAGGCTCTGACTTCC
CTCTTCATCAGGAAAGGTACATAGAAATGTTGAAACAGGTTGTACAATGCTCCTTCACCT
TGTTCTGCCAGGTCTGTTTTGGTGCCCCGCAGACAGCAGAATATATCGAACCTGTTGTCG
AGTTGTCGGCGCGTGTCCAGCGCCAGCAGCGCCACGAAGCAGGTGACCTGCAGCAGGAAG
TCCACGAGCAGCGCCACGGCGGCGTACAGCGCGAAGGCGCGCACGGCCGGCATGTCGCTC
AGCGCCCCCAGGAAGAAGCACACCGACTCCGACACCGACGTCACGAACATCGACGGGCCC
ACCTTGCCGAGCATTCTACCGATGTGTTGCTCGACGGTCTCGTCGGGGCGGCGCGGCTCG
CGCTGGTGGGTCTGCACCAGGATGAAGATGTTGTCGACGCCGACGGCCAGCACCAGGAAC
GGGATGACCTCCACGATGATAAGCGTGGCCGCCACTCCATAGAACCCGAAGATGCCCATG
GAGCACACCACAGACGCCAACACGATAACCACACCGCCGAGCCCGAGCGTGATCTTGCTG
TCGATGAGCAGCCGCGAGAAGGTGGTGAAGCGGCCGAGCGCGATGGCGATGTACGCGAAC
ATGATGAAGTAGGACACGAGGATGGTGTACACGTCCGACTTGGACTCGCGGTCCAGCTCG
TCCTCGATGGAGCGCTCCGACGTGTACGCGATGTCCATGTAGCCCGGCATCGCCTTCTCC
GTGTAGTTCTTCATGAACGCAATGAACGTCTTCTCCCACTCCAGTGCTTGTTTCAGCTGG
GACTTGTCCTGCTTGTTGTTGACGAGAAAGGTGAGGATGAGTGCCTGCGCGCGGTGGTAG
GGCGCGTGGGCAGAGAGCTGGTCGCCGCGCGGCAGGAAGCCGCCCAGCGCCACGCCGGGC
AGGACGGGCCCGCCGTACGACGACAGGCAGTCCACCGAGATCGGGTTGCTGGAGCACTGC
AGGATCTTGTCCAGGTGTTCGTTGTCCTCGTAGGAGAACTCGGACTTGTCGTTCTGCCAC
CAGCCCCACACGCTCTGCAGCACGCAGTCCTTGCTGGTGACGGGGCCGCGGAAGGGCGAC
GACAGCGGCGCGTAGCAAATGTTCTGGATCCCGGACTCGTTGCCGAGCTCTAAGATCTTG
GACTGCAGGTCGAACACGTCCAGCATGAAGGTGGCGTTGAACACAGGCCCGAAAGTCAGG
TTCGCGTGTTCGATCTCGGGCAGACCTTTCGAGCTGATTATTAACATTTCTGTCCTGTAG
AAAGGTTCGAAGTAGGAATCGAACCGCTGCCTCTCGACCCTGGAGCGCGAGGTGGGCGAG
GCCCACAGCTCCACGGGGTCGGTGGTCACCTGCATGTACGTGATGCCGGAGCCGAGGATC
ACCACAACGCACAAACCAGAGAAGAGGACCAGCCAAGGCGAGGAGGCCATGACGCAGCCC
CACCACTGGAAGAAGTCTTCAATTTTGGATTCCGTCGCAGCACCGAGCTTCTCGAGGAAC
GTCGCGTCTGTCTCGTCGCCATCGGTGGCCTCCATGGTCCAGCGCGTGCCCGACGCGTTT
GTTCCCATCTCTTGATTGTTGTCTGAAGACACACCAACGAGGTTTTCGGTTTGATTGCAA
CAGAAGACGCCCGTGAGGAACAGCGTCGAGAAGATACAGAATACGATGGTCATGACGATT
GCGTAGCCGTCGAAGCCCGCGATGGAGAACGGCTGCGGGGGCGGGGGGCGCGGCGGGGGC
GCGGGGCACGACGCCTCGCAGTCCAGGCACGAGCAGCCCGGCATGCCCTTCGTTCCGACA
TTGCAGGGCTCGGCTATCGGAGCGTAGGGCGTGTACCCATCGACGGGCACGTCAGTGGCC
TTATAGTTAATCTGGAAGGGCACTTGATAGTTGGAAGCGTCCCCCATGTTATCGAACCAA
CGTTGCGCCGAGCACGCGTCTCCCCACTGACCGCACATCACCTTTATGGATCGCTCGTTT
GTTGACGTAAGCTTAACCTCAGAGCATGAGTTGTAGATGCCATCCATGAAAGTTTTACTC
AGGTAGTAATCGATCTCAGATATCCTGCGATGTGTACCGTTGAACTGTTCTGTTTGAACT
GGCTTCAAGTATTTGCTCTGATCGACGGCGCAGGCCATTCCACAGATCGGCTTCAAAAAG
TTCTGAAAGCACGTCGGGCATCTCCCCAGCAAATTTTCCGCAAGGGCGATATTCACTTTG
AGCTGGTTCAGTTGTTCGTAATTGCAGCACGAATAACCTCCTTTGGCTATCTCGGGACAA
TATTGCTCAATTATTTTCATTGCCTTTTCTTCGATCGGTTTAGCGGGTCCATCATAGAAA
CAATTCATCATTTTATGTTCTGTGCTGTTCGCACAAACGCCGTACCATATGCAGTGACCA
TCTTCGGCCAGAGCAGACGGGATATGTTCTACTAACACCAATAGAAAAAACAAGGCAGAT
AGAAATCGTCGCAAAAAACTTCCGCGATCAGCCATCTTTTATCCTTATTTTTCACAATGA
AATGATTAGATTCAATTTTATTAGCATATTATAATTAGAGCTTGTCCAAAAAATACGTTT
CTCTAACGTGAGTTACGTAGAGTAAAAAATAAAATAACAAAAATCATAAATAAATTATTT
GTCCGACATAACGCACCACTATCGCGCACAATTAGCTTCCCG
(4182 bp)

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