SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10189_c0_seq11
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_calpain-A_isoform_X1_[Bombyx_mori]
Ontology
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006909 P phagocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008340 P determination of adult lifespan
GO:0009953 P dorsal/ventral pattern formation
GO:0015629 C actin cytoskeleton
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning
GO:0030036 P actin cytoskeleton organization
GO:0042335 P cuticle development
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:2.00 TPM:2.19
ORF EntryO_BomoFB12293_complete:A_BomoFB_comp10189_c0_seq11
Sequence
(Nucleotide)
GCCCCCCGCCCGCGACCCCGCCGCCCCCGTCGTATGCGCCGTGCCGCATCGCAAGTTCTT
CCCTCATGGCGTAGTCCAAGATCTCCTTGAGTTCCTGCCAGTCGACCTCCCCGTCGGAGC
CGGCGAGCCGCGTGAAGAACTCACGGACCGGGTCGGCCGGCTCCGGGTCCGGCGCCAGCT
CCTTCACTCTGTCGTCAACATCGCCCATACCGATGTCCTCGTCATTCTCAGCCATATTGT
TGTCCTTTTCGGAGAAGACTCTTAGTAAGAACTCTCCCTCCTCGTCAGGGTCGAAGGTCG
AGGGCACTATCACGTACGAGCCGGGCTCGAACTTGAATCTGGCGCTGACCTCCCTCAAGT
TGATGAAGGCCTGCGACCTGCCGACGGACGCGTTGTACTTGAAGAAGTTGACGTCGAGCG
GCTTGGGCACGTGCCCGTAGTCCGGGAGGCGGTACACCGCGAACCCGATGGTGAGGCACT
CCAGGCCCTGGTGGCGCTGCGAGCGACGGTTCTTCTGCATCAGCGCCACGATTATGGTAC
ATTTGTTCTCGTCGTCTCCTTCGTCGGGGTCGCTCAACGTGACGGTGTACTGAGGGTTCC
GCCAGAACGTCTCCAGGAAGTTCCTGCAGCCGCCGGCCGTCACGCCTCTAACCCATTCGC
CTTCGAAGACCGACATCTCCCACTTCTTGGTGCAGCCCTCGGGACACTCCTCGGGGTCCA
GAGAGTCGGGGTTCAAGTTGCATATCTCCACTCGCGAGAAGTGGTTGACGAAGTCCTTGA
ACGACATCCAGAACTCGCCGTCGTCGTCGAACGTCAGGCCGAGCTCCTCCTTCTCCGACT
CCGGGATGTAGCGCCACTCTGGAGACTTGTCGCTCCAAGGTCCGTTCCACTCGGCCTCGT
TCCCCCAGGGGTTGCGCAGGCGGAGCAGCGGGATCTTGCCGGCGCGGCCCGGCGTCTCGA
TGTCCACGTACTTGACCCGGGTCACGGAGTACGCGTGCCCCCGGATGAGCCCCGCCGGAG
TCTCCGCCTCGAGGATGTGGGGGTCGGGCTCAATACTGCAGCCCATAAGAGAGTTCCTCT
CGTACGCCTTCAGCAGGATCGTGTAGAAGTTTGGCGGCAGTTCGGACATCTCGTACATTT
CGGTGACGCCGCCGGTGAAGTCCTCCATGGCCTCGCAGGTCGAGCCTCCCTTGAGGGCTT
CGTACGATCCGTGGAGTTTCGCATATGCCTTCTCGAGTAGAGCACTCCAGAACTCGTTCG
CCTCGGCCGAGTGGAGGAACACCAGTTTCCCTCGGTACGTTGGGAGACGGTCGTCGATGA
CCACGTCCACCCAGCGCCCGTACTGCCAGAAACGGAAATGGAAGACGCCCGCATAATCTT
CATCGAAACTCTGATCATCAGGTACAACTTGGAAGAATAACTTGCGATGAAGTGTCAAGT
TGGCAACGGCAGCCAACAGCCAACAATCGCCCAACTCTCCTTGTTGGACGTCGAAGCGAC
TGTAGCCTTCGACGAAAAGTTGAGGGTTGTCGCTGATTTCCCCAGGTCTGAGCCAAGTGA
TGGGCCTGTCCAGGCTCTCCTTGTAGTAGAGGCTGCGGTCCACGGCCGGAAACTCGGGGT
CTTCGAAGAGTCTACCTTCAGCTAGGCACCGCGATCTTATGTCTTTGAAGTCCTGATACG
TAGCCGGACCGAATGATGACGGGCGGGTTTCGCCTAGCATAGCATGGACGTTCACTGCGG
CACAAGCCTCTTCCACCACCTCCTCAACAGCTCCGCTCTCATATTCCTCAGCCGGCAGAG
CAGGATACAACTTGACACCACTAAACGAAGCATCATCTTCACTTGGCAGTTTGGGATACA
AGCTCCCGTTGCCTATCAGCGGCTCGGAGCTCCCTTCGCCGCGTTCCTTATTCAAAAACC
CTTTGACAGCCGCAGCCGCGTTCGCGGTTCTGTGCCAACCCCAGCCGTTGGCCTTGAAAT
TTTTCGGATAATAATTGAACATTTCGTCAGAGCACTTTCACAAAACGATTTCTCGCTGTA
ACACGTCCGCACTTAAACGCGTTTGAGCGTCGAATGCTGAATTATCGAAACTTCCCACAC
ACCGCTTCTCTATGAGAGCATAAGGAATGAAT
(2132 bp)

- SilkBase 1999-2023 -