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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10187_c0_seq6
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		lipophorin_receptor_isoform_3_precursor_[Bombyx_mori]
Ontology
GO:0001666 P response to hypoxia
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007166 P cell surface receptor signaling pathway
GO:0007507 P heart development
GO:0007584 P response to nutrient
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0009725 P response to hormone
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021987 P cerebral cortex development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0030296 F protein tyrosine kinase activator activity
GO:0032496 P response to lipopolysaccharide
GO:0032869 P cellular response to insulin stimulus
GO:0034361 C very-low-density lipoprotein particle
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0042149 P cellular response to glucose starvation
GO:0042493 P response to xenobiotic stimulus
GO:0045177 C apical part of cell
GO:0048471 C perinuclear region of cytoplasm
GO:0061098 P positive regulation of protein tyrosine kinase activity
GO:0071222 P cellular response to lipopolysaccharide
GO:0071347 P cellular response to interleukin-1
GO:0071456 P cellular response to hypoxia
Transcript
Level		FPKM:5.17 TPM:5.67
ORF EntryO_BomoFB12265_5prime_partial:A_BomoFB_comp10187_c0_seq6
Sequence
(Nucleotide)
TGGTTGTGCCCGGTGTCGGTCCAATACAGATGATTATAGACCCAGTCGACTGCGAGGCAC
CGGGCACAACCACATCGAGCTCTCCGATTTACAAGGGAACATGAGAAAAATACTGATCAG
AGATCGCCTGGAAGAACCACGTGCAATTGCACTGAATCCTTTAGAAGGTTGGATGTTCTG
GACCGACTGGGGTCAAGTGCCGAAGATCGAACGTGCTGGCATGGACGGTTCACATCGGAG
CACCATTGTGTCTTACGACGTAAAATGGCCCAACGGTCTGACTCTGGACCTTGTACGCCA
ACGAGTTTACTGGGTGGATGCGAAAATGAATACAATCTCATCGTGCAACTACGACGGGTC
CGGGCGCCGGCTCATTCTCCATTCGACCGAAGTGTTGAGACACCCGTTCTCGATAACCAC
ATTCGAAGACTGGGTCTACTGGACTGATTGGGACAAGACAGCCGTGTACCGAGCGAATAA
ATTCAACGGTAAAGACGTGGAAGCAATCACATCTACACACACGCTCCAAAACCCGATGGT
GATTCACGTGTATCACCCGTACCGGCAACCCGATGGTGTGAATCACTGCGCTGCTGTCAA
CGGTCACTGCTCTCACCTGTGCCTGCCCGCCCCGAGGTTCGGTCCCAACTCGCCTCGCGT
GTCCTGCGCCTGTCCCAATGGGTTAAAGCTCCTGCCTGATGACCAGATGTGCGTCGAAGA
CAGTGTACCAGAAACACCAAAAGTCGGAACAGAAATCTCAAACAGCGGTCGCGATGCCGG
AGTGGTCGCCGGTATCGTGGTAGCAGTGATATCTGGAGTTTTATTATTGGCTGCAGTGAT
CGCAGGTGTTATGTACAGACACTACGTACATCATAACGTTACATCGATGAACTTCGACAA
CCCGGTCTACCGTAAGACAACAGAAGACCAATTCGCTTTGGAGAAAAATGGCTACGCACC
GGGAAGCAAGCTGTACCCGAGCACCGTGGGGGAAGAGGCCCAAGAACCACTCAATAAGCC
GAATACAGAATTCGTATAGTGTCCGTGTCGGCAGTAAATACGTTTCAATATCATTGAATG
TGAAAAGAAAAAGAAGGAGATGTGATACATGACGTGAATAGTTCTAACCAGTGAACGGGA
CTAAGCTACTGTAGTGTACTCTAGATGGCGTTAGTGCAGTGTTAAGTGTAACGCTTCGGA
ACAAAGTTCTTTTCGCGCTCTTTCATACGTCAAGCCGAGGAGGGATCTCATTTAAGGTTA
TATTTGGTTTGCTATCATGTCTTGTAATGAATATAAATCACGGGGAGGCTATTGTATCAC
ACGTTCGCTTAGAGAAGATCGGTTTTTCCTATAAGTAAAATTTCTCATTAGACTGAATAG
TATAGAGATTTTTTAAAATATTTAATTATTTAACGAAATTACGCTTTAATGGCGAACTGT
TCCATCACTTTTCAGCTTTGTTGTTAATTTACTATACATATTTTATTTTAGTTAGATATT
ATGATCACGTAGTAATGTCGTGCTTCGAACAAATAAAATGTTTTTGTATTAGAAAATAGA
AAAATATATTAATTTAAAATCCTTTTTGTTTTGTAAAAGATACAAATGTACTGATTATAC
AACTTTCAAAGTATAACATTAGGAAAAATATTAAGTCTCTCCTGTAGATTTTTTAACATA
AATTGTAATTATTTATTGGAATTAATATGAAATATAGACTAATGATTACGGTAGTCTACA
ATTTTTGTGCCAATCCCTGATACACACTGTGTAATTAAATTAATTTCATTAGATAAATTT
TATTATCAATTTAAATGTTTGTTATCTAATATTTATTTGTAAAACAATTGTTATTTATTA
CAGTTTAACGTAATATATAAAATATTTTATGTAAAAGTTGTTTTTGAATCACACGTTCGT
GCTATGTGATTTGAAAATAGGAAGGAAATTTGGAATTTGTATTTGTCAAGCGAAATCCTG
CCAAATGCCGTAAATAAGTTTATAAAAACATAATTACTCTTTACATAATTAATGTAATTC
AATTACATTGTAATAACTTGTTGCACGATTCATACAATATCTACGCCTAGCTGAATAAGT
GTGGTCACCG
(2110 bp)

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