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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10187_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_lipophorin_receptor_isoform_X3_[Bombyx_mori]
Ontology
GO:0001523 P retinoid metabolic process
GO:0001948 F protein binding
GO:0002020 F protease binding
GO:0005041 F low-density lipoprotein particle receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0009897 C external side of plasma membrane
GO:0009986 C cell surface
GO:0010628 P positive regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0010867 P positive regulation of triglyceride biosynthetic process
GO:0010899 P regulation of phosphatidylcholine catabolic process
GO:0012505 C endomembrane system
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0030169 F low-density lipoprotein particle binding
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0030299 P intestinal cholesterol absorption
GO:0030301 P cholesterol transport
GO:0034362 C low-density lipoprotein particle
GO:0034383 P low-density lipoprotein particle clearance
GO:0042157 P lipoprotein metabolic process
GO:0042159 P lipoprotein catabolic process
GO:0042632 P cholesterol homeostasis
GO:0042802 F identical protein binding
GO:0043235 C receptor complex
GO:0045177 C apical part of cell
GO:0050729 P positive regulation of inflammatory response
GO:0070508 P cholesterol import
GO:0071398 P cellular response to fatty acid
GO:1990666 C PCSK9-LDLR complex
GO:2000188 P cholesterol homeostasis
Transcript
Level		FPKM:3.28 TPM:3.60
ORF EntryO_BomoFB12255_3prime_partial:A_BomoFB_comp10187_c0_seq1
Sequence
(Nucleotide)
TGGTTGTGCCCGGTGTCGGTCCAATACAGATGATTATAGACCCAGTCGACTGCGAGGCCG
TCGGATGTAATCAGCTGTTCACCGATGACGACTGTACGTTGAGTGCCTTCATCAATTGGT
GCTTTGTAAATCTTCTCGTCATTGACATCGCTCCAAAAGATCATTCCGGTTCTGAAGACA
TAGTCGAGTGCCGTTGCTGATTTTGTGTCGTTCACAATCGCCACCATTTCATGATGGTCC
AGGCTTATCTTACGAATGTCGTGTTTTCTTGCGAACAGTAATGATGGGTGCCCCTCCGTT
GCTTTGCACCTGGTTCTGTCACGAGGGTCTCTGGCGTAGCCGGTATGACATTCGCATTTG
AAGGTGCCTTTTTCGTTAATGCATATTTGTGAGCAAGATCCAGGGTCCGCGCATTCGTCT
ATATCTTCACAAGTCCTGTTGTCGATAAGCTTGTAGCCCTTTTCACAATCACAATAGTAT
CCAATTGGTGTATCCACACAACGTTGAGAGCATCCACCGTTGTTCTTCTCACATTCGTTC
TCACCGCATCTGTCTCTTGGCTCGTCCTCAAAGTTGGGGCAGTCCACATGTTTATCACAA
ACTTTGGACAATGGGATGCACATACCGCCTCCGCAGTCAAATTCTGTTCTTTTGTCGCAA
ATAGTTTTTTGTCGGGTGCAGTTGTACTCATCGCTGCCATCAGGGCAGTCCTTAACCCCG
TTACAATAGAGGGCTCCCGGAATACAGCTATGGTCCTTGCATTGGAATTGATCTAGTCTG
CAAGTGACATTGCCCCGACATAGTTCAAGAGCTTCGTCACCACCATCGGGACAATCGTGG
TCACCGTCACAGACCCAGGCCCGGTGCACACAGGTTATGCGATCGTTGCATTCGAACTCG
GTAGAAATACACGGAGATCTGACTTTAGGTGTGGAGACGCATCCCACTTCATCGCTTCCA
TCGGCACAGTCGACGTCACCATCACAGTGCCACCACGCTGATATACACTGACCATCTGTA
CATGAGAAGTGCGACTGCGGCTGGCAAGTTGGGGTTGGACATTTCACTTCGTCGCTGTCA
TCGCCGCAATCGTCGTCACCATCGCACACCCATCGCATTTGAATGCACTTCCCATTCCCA
CAGGTGAACTCATCGGAACGACAAGTCTCGTCGCATTGGTGTTCATCTGAGCCATCGGGG
CAATCAGCAGTGGCGTCGCAACGCCACGAACGAGGAATACATAGACCGTCACTTAGACAC
TCAAATCTGTATTCCTGGCACACCATTTTAGTCGCCGCTGTGTATTTAATTTTGAAATAA
CTTATCATCTTTTTGTCCCATTTCATTTTAATAAACGATAAACGTTTTTAGCTATTTCCC
AATATTAAATTGCATGGATAATTAGAAAAGAAT
(1413 bp)

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