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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10181_c1_seq4
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
Transcript
Level		FPKM:4.75 TPM:5.20
ORF EntryO_BomoFB12232_complete:A_BomoFB_comp10181_c1_seq4
Sequence
(Nucleotide)
AAACAATTGATTATGATAAACCTAGAAGACCTTCGTTACCAAAGGATCTATGCGAACAAC
AAATGGAATACATACGACAGAAAGAGAAAGAGGTAGAAGCAGAAATTCAACGATTGGAGA
ATCAGTCCAGAATGAAAACACAGAATCTAAGGAAAGGCCCTAGAGCCCCACTGATCTCAG
AAAAGGAAACTATTGAAAATGATATAAAGAACGGTGACAAGGTATTGATTTCTCGTAAAA
GAGATGTTGTCATGTCGTCACAAGATCTAATAAAAAACAGAAATGATAAAGATAAATTAT
CGTCGTTATTTAGCAGTAGTCAAGAAGAATTGCAACGTGAAAAAATGTATACTGAATATA
TGACACAAATGGCAGAAAGAATGGAAAGAAAGCACCATAAGGTTATAAAAATTACTAACA
CACCCACTTCGATAAGGTCGATATCGAAAAGTATGCCCACACTTGAAAATTTTGATTCAA
AGGTCAACAATAAAATTGAAAAAGAATTTATATCAAAGGCTAGGGAAAGATGGGAGAAAT
TAGGAATTAGGGACCCCGATACGGAAGATGAGCGTGAAGTTAGTAGGAAAGTATTCAAAG
AACCTAAAATAATTGAACACAAAATTAAGGTTATCGAAAGTGGTGAAGAAAAGGATGTCC
AAAACTTGCCTAGTCATTTGCAAGACTTCATTCATTTTACAATTAAGGACAAGGGCGAAG
AAACAAATAGCTCTGCCGTGTGGAGGCCGGGAGCGCCAACGCCCCCGCCGGCTCCGAGCA
CCCCGCGCAGTCCCGGCGGACCGCCGCCTCCGCCGCCCCCGCCGGTTTGGACGCCGGGTA
GCGCGGAACCATCTCCGCAACCCACACGGAAGACATTCAGACCAGTACATTTTGAGGAAA
CACCACCGAGTCGCCGGAAATTCACAAACACGGAACAAAACGGTTGCACCAGTGGCTCCG
AGAGCGAGGGTCGACTGCGTACCTCGCAGAGTGCCCCCGCCACCGGACTGAACACGCTGA
GCGGCTCATCGTCTACTAGCCGGCTACCACGAGTGCAGAACCCCACTGTCACGCTCTTGC
AAAAAGCGCGAGAAGGACAGTTGCCACGGGGTCCTGCTACACTTCAATCAGAAAGAGACA
GTGCCCGATTACCTCGTGATAGACCTTCGCCACCAAGCGGTGACCCAGTCCATGCCTTAA
GAAGAGAGTACGCGAGCGAGAGCGAAGCAGAAAGAAGAGATTACGAACGTGTCGGCGTTC
GTAAAATGTCTGATACTCAACGGAAAGTCGACGGTGTTGGACCTATAACAAAAGACGGCA
TGCCGATTACACTTAGATCTGAAGTCAAAGATCCATCGCGTTGGTATAAAAAGATGTACG
ACACGATTCATAAAAACAAATACGATGACGATTACGTGACAATACGATACAAAAGTCGAC
GAGAGGCAGCAGAAAGGGTGCCAAGCAGTAAATCTCAATACGCATATTTCGACCCACGTT
CTGGCTACCTGAGCGAACCTGAAGGAGGATTGAGCAGGCTCAGTGCGTTTAGTGATGCCT
ATGACAGCGACGTCACGACGGGCCCGAGGAGACGAACGGCATCCGTGCAGGAAGATCGCC
GGATCAGTGACGTCAGTTCCTCTTATCTATCCAATAATAAATACAGTACATTAGCATCGG
CAAGGGCAAGCCAAGAAGTTTACAAGAACCAGCCGGGAAGGATTGAGAACTATGTGCCCG
GGAAATCTTCAGTCGTTGATAAAGAAGCAAAGCAGTGGTGGGACGAGGTTATGGACATTT
TTGACGGGCAAAATATATCCAGCACTACCTCGTTGCCCCAACCTTCGCCAAAAGAGAAGA
AGGATATTACTGCCGCAATTCTGTCAAAATCCAACATGGCAAAAGCTCTGAAGGAGTCGG
GCTATGAATCTGATTCTACTCTTATATTCCGCCGTCGCGAGGAAACGGACGCTCCGCTCT
CTCCAGCGGAGAGGAGGGCCGCGTATCGTGACCTGCAGGCCGGCGGGGAGCCACCCCTAC
GCGGATTCCGATCTCCTGCCCCGCCACGTCAAGAGTCTCCCCGGCGTTATGTGGAAAGCG
ACGTGAACATCCACTATCGGTGTCCAGTGCGACACGACCCCTTACCTCTCGTACCCGAGA
GAGAGCTTGCGAGGCAGCAGGCAGAACACATGAAGAGGCTGTATCGAGAGCAGAAACGGA
ATAAATATCTGCAGGAGCTGCAAGATATGCAAAACAGGCGTCACCAAGACAACTTCACGC
CTTCACAGAAGACCGTAGTCCCTCTGAACAGATACGACGATGCCGACAAAGTTCTTGCAA
AAGCCCTATACACTTTCAACGGTCAGACTTCTCGAGAACTCAGTTTTAGAAAAGGAGATA
TAATATTTGTGCGGAGGCAGATTGACGCGAATTGGTACGAAGGTGAAATTCATGGAAGAA
TTGGTCTGTTCCCGTATAATTATGTAGAGATACAGAAGGGTGATACAATCCAAGTTATTA
AGAAGCCGTCAATCGTCGAAGGCCGTGCCAGGGCGAAGTTTGATTTCATAGCACAGACCA
ACCTCGAACTGCCATTGAAGAAAGGAGAAGTTGTGACTTTGACCAGACGTATTGACCAGA
ACTGGTGGGAAGGCCGCAACGGCTTAAAAACGGGAATATTCCCGGACAGCTACGTTACAA
TTCTACAGGAACCTAGCCAGAGCAAACCTGATCCGAGGCCAATCTTAAACACCGATAAGC
CAGCGGCGTCACCGGCCGCTCACGGTCTTCTCAACGGTTCCGATAAAAGAAGTATGGGTT
CTCATAGCTACACGCCACAGCAGAACAATCCAGCGCTCTCCAATGCACCACCTTCCACTC
AGCCACTTCCTGGTTATGTGGCGAAACCAGCCCAAGCGACACTGACGCCTTCCGAACGTG
GCTACGGTCCTCCAACAGGCTCGGGGGTAGATCTTAATAACACCGAACCCCTGTACGTCG
ACACTAATGCCGAAGCCATACCATATCGTGCGATGTACAAATACCGGCCTCAAAATCCTG
ACGAGCTCGAACTGAACGAAGGTGATACGGTGTACGTACTGGAGAAATGCGACGATGGCT
GGTACGTCGGCTCGAGCCAGAGAACTGGGCGCTTCGGTACCTTCCCAGGCAACTACGTGG
AGCGTATCTGATAGCGCGAGACGTCGCTGTTCCGTCGGCTGCGGCGCGCTGCACTGTGCG
GCCGGCGGCGTCGCTGAACTGACGCACTAACACGTGCCACGGTACAACACGACACAACCT
CCATACCATTATACAGGGTGTAACTACACCGTTCCCGAAATCGAAACGAGAATATATTTT
TTATTGCTTAAGTGTGTGTATGGTGTTAAGTGGTTACCGGAGCACATAAACATCTAAAAG
CTAAATGCCGCCACCCACCTTGAGA
(3445 bp)

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