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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10135_c0_seq1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		RNA-binding_protein_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035327 C euchromatin
GO:0045292 P mRNA cis splicing, via spliceosome
Transcript
Level		FPKM:11.18 TPM:12.25
ORF EntryO_BomoFB12076_complete:A_BomoFB_comp10135_c0_seq1
Sequence
(Nucleotide)
TTTTTTACATCAAAATTATATTTAAGTCATCTTAATAATATCTATGAAGTAAAATATGTA
TTTTAATTCCTTAAAATTAATGAAGTGAGTGATCTAAACACTTATAAAAGTTTTAGACTT
ATGTTTTCAAAGACAGCTAATGCAGGTTGCATTATTATTAGCAATAGTATACAAATTACT
CCACACGCATTTTCACATGTACACGCTTAAAACTATAAGTCTTTCACATTGTTCTTCTAA
AATCTGCACAACTTCTCAATACCTGGTTTTGCTGTCAGAACGACTGCGACGGTCGCGTGA
TCGTGAACGGCGGGGAGAAGGAGAGCGACGGCGAACTGAAGGCGACCGTCGTGGAGACAT
TGACCGGCCGCGAGAGTATGATCGGCGGCGGGGACTACGACTGCGTGACCTGCTGGAATC
AGATGATAATGTATAAAATCACTTTTTGGTCATAACTGATAGCCAACAGTTTAAAGACAA
CCATTAGCCCCGCTGTCAACAATCGCAATGTTAACAGGCTACCACCAACCATGAGTACTC
TTTACACCTTTTTTTTCTTCAGTAAAACTGAATGCTTCGAGGTTGGGCCCTTTAAACATT
TAATTTAACATAGAATCTGCTATTATTGAATTTTTATGTATTTTTTTATAGAAACGTTCT
AATAAAACTAAAATAAATGTCCGTTCGCTCTAACTTTCCTACAATACACCTGATAATACA
CCAACACAAAATTACTAAATTTAAATACAGGTATCAAGGTAAGGTTCTAAGTATAGGATT
CAAATAGTACCGATACATGGTGAGCCTGCGAAGAAGGTCGACCGTTGTGCGACTGCTATG
AGGCCGTAGGAAATAATTGAGGCGAAGTTGGATTTTCAACTTTATCTTCCGAAGAACCGG
TGTAGTGGAAAGCTCAATAAAAATTGTGGTAACACAGGGAGGTGGTTCTGTCGCCGTTAG
TAGCTTGGTGCCACGGTGAAACGTGTGTGCACTCGTAGATATGTCAACGTTTGAGTATTT
TATTCAGTGCACTTGTTGTTTTCCTACTGTTGGAGGTTTCGAATGTGTTTTCAATTCCAA
GTTCAGGTAAAATTGAGGATTAGGTGACTGCTGTGAGAAGGATTGTTATGGGGACGCAGT
TGTTGGTGACTTCGTCTGCACGCAGCAGTTGGGTGAGACGACCGCAGAAGTCGAGCAAGA
CGTTGATGCGAGCGGCGATCGCGGATGTCAAATTGGTTAACAAGCCGTAGTTGTGAAGAG
ATGTGGTGAGGTCGTTGGTGTGTTGGTGGTTTGTTGAAAAAATGGACCTGCAAACGTTCC
AACACCCACCACATTTAATATCTCACGTGTGAACTTAGATTCTACTAAAGTACTACATTC
AAATTAAATATAAGCAATATGTGAAATTGGCATTGAATAATGTTATACATTTTCTTCAAT
ATTTGTCATCATTGAAAATTCATTATTTACCACTCATTCTCTCAGATCTCATCAACTAAT
ATAGTAAAATAAATAAAATAAAACTCAAAATCTCTGATAGAAAAAGAAATTAGCACTAAA
AAGTCCAATTTCATAAAAGAAAGAGACAACTGCCAGTGATAAATCTTTGATAAACAAAAT
GAGCAGATTATATAATAAATTCTTGGACCCAGAAAGTAAGAGTCAACATTTAAAAAATAC
CTGCGGTCTCTCCTTGTGCGACCATTTGACATTTCGACACGAATCCTGGTGCCACAGCAG
CGTGTTCCATCAAGTCCACGAACAGAGTCTTCAGCATCACGGGGGTCTTCGAATTCTACA
AATGCAAATCCGGGCGGATTTCGAGCTACCCATACGTTACGTATGTTACCGTATTTAGAA
AATATTTTTTCTATTTCATATTTAGACGCATTAGTACCCAAGTTGCCCACGTACACTTTG
CAAGAAAGATCCCATTCTCTGTAGCGAGACATCTTAGTTTTGATTGAAAAGGGTGGATAA
AAATTATTCACAATATTTCACTAAATTTAATTTTTTATTGCTCGCCACAACCTTTCGTCT
CCACGTTTGACGGAT
(2055 bp)

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