SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10126_c0_seq4
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_UBR5_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007112 P male meiosis cytokinesis
GO:0007281 P germ cell development
GO:0007283 P spermatogenesis
GO:0007289 P spermatid nucleus differentiation
GO:0007444 P imaginal disc development
GO:0007446 P imaginal disc growth
GO:0007455 P eye-antennal disc morphogenesis
GO:0008270 F zinc ion binding
GO:0008585 P female gonad development
GO:0016874 F ligase activity
GO:0030162 P regulation of proteolysis
GO:0034450 F ubiquitin-ubiquitin ligase activity
GO:0042127 P regulation of cell population proliferation
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043130 F ubiquitin binding
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046872 F metal ion binding
GO:0048749 P compound eye development
Transcript
Level		FPKM:16.08 TPM:17.62
ORF EntryO_BomoFB12047_complete:A_BomoFB_comp10126_c0_seq4
Sequence
(Nucleotide)
GCGCGGCGCGGGACGGCCGGCCGCACGACGCGTTGCTTCCTTTGAACGCGCACGTCCTGC
ACCGCTCCGTGCGCCGCTGCTGCTCCCAGTGCCACCAGCGGCGTTGCCAGAAGGCCCAGA
TGTTCCATTAGTACTGCTATTTGTGCTATTGTTGCCAGTTGCGGATTCAAGGGGAGGCAG
TTTTTCATTTGCAAGTAAAGCCTCTGCTACACTAGTGTAGAAGGATCTTGCGACGCCGCT
TCCTTCACCGGGTTCATCTCGGAACGTAACCTTGACGCGATTTACAGCCAGTGGAGGTTG
TGCGCTATGTGCTCGTCTATTCTGTCCGGCAAACGCACCATTCAGCTCCGCGAACGTTTG
TTGTAAGAGTTTTGAACGGTCACGTTCCATCTTGTGCAGAGTCAAGTCTTTCTGCTGTGA
ATTTCTAAGCTTTTCCATATCATGTCTAAACTTCACCTCCTTTACTCTGAACCCGCCTAG
TTCAGCTACAACGGATCCAGGTTCCAAACCAACGTCTTCGGTAAAAACTCGACCAAATAA
ATCGAGAGACAGCCTCCAACGGCCAAGCAAAAGATCGTGGGAAACTGATGCACCCAGAGA
GGGACACGCTCGTGGTTGATTTTGAGCATTGAGTGTTGGTAATACAGGTTGCAGAGGCAA
TCCCGTAGTTTCTACCGTGACATGCGCCGATATCTCTTGAGATTCCAGTGGATCTGCAGC
ACTCAGTAATTCCCCAATAACGGTCTTGCCAGGGCTTCGCGAAGTTGAGGCTCGCGGTTC
GGTGGTTGTGCCTGTGGAGGTACTTGGCCCAGGAGTGGGTGAAGTGGCAACAGTTCGTTG
ATGTGGAGCTTCCATCATCGAGCAGGCAGTATCGACTAGGGCATGAAACTCTGAAGGCTG
CACGACAGGCTCTTGCATAGAATTGCTCCCAGGAATAGTAGTAGAGTGTGGATGTCTGTG
GTGTTTCTTCCTCGGTATCTGTCTTCCTTCGTTAGAGTCGGAATCCGACATATATTCACC
ATCGGTATCTACATCCATTTTCGTTGCTGGGTCCTTATTGGCGCAAGATAAATCCTGTGG
TTCATCCCTAGTGATTGTGTGCGTGTGCGCAGGAGGGGCAGAGGCGGGGCGCGCGGGCGG
CGACCAGCCGCGGTCACTACCTCGAGTTGACAATCCCAAACGGCGTGGAACTTCGAGTGG
ATTGTTGATCCCCGGTGGCGCGTCACCGGCGGGCGGCACGGTTACCGGCTGCCGCGGCTT
ACCAAACAGTTCTTCACGACGAGCGTTAGGTTGAAGCAACTGAGGCTGATCGGCCAGAGG
CAAAGCTTCTTGCATGCTCATGTTAAAAGGATCAGGTGGGGGACATCCAAGGCAAAGTGT
TGAGTCTGATCTCTGGAAGAAGGCATGTCCGCGGCCACGCGCCCCATCGCCCTCGCCATC
AGATTCGGCAGTAGCTCCATTACCGACCACCATCTCCTCATCGCCTTCTTCATTTTCATT
TTCATCCGGCGTCCACAAATGATAATGGTGATGGGGCTGAGGTTGGGCAGCACGCATGTA
GTAGACCAATGCATCAAGGACATAGGCGACGTGTTTAAGAGCTGCTACATCTAATACAGG
CAGTTGTTCGGCATGTTCCGCGCTGTGTGCTCTCAGCAGAGATAGGCAATAGGCAAGGAA
CTCTCGACGAGCGCTGCCTGCTTCAACACCTTGTTCACGATCTCTGGTCCTCGGTCCTTC
AGAGAAACCAATAATACGAGTAGCAAGGGATGCTAGGGATGTAGTCGTCCGTCGCGTTGT
GGTTGTATTCGAACGTCCAGTGTCGCCGCTTGAACTGCCCGCATTGTTAGAAGTTAAGGA
TGCGCCGAATCGGAGTTGTGCTTCAGTGGCATCCATAACAGTAACAAGCCAATCCCAGGT
GGGCTTCAATTGTCTCTCAAGATAACATTGTAGGCGCAGTCCTTCTCTGTACGCCAGTGG
AACCACGCGGGGTAATGGTAAAGTAACGCGCTCGTATTCCCAAAGCAAGGCGGCGATTTG
ACGGATCACTATACCGAAAGCTCTGGCGAGGCATGAAGCAGTAGTGGATGTTGAGTGAGG
GTCATGTGCACCCGCGGCAGCGGCGGTGGAACGACGCAGAGACACCGGATCAATAAACAC
TAGCGACGAGTTGCCCGTCAGACGTACGCTTCCCGTGCTGCCGCTCGTTCCTCGGGTAGG
TTCTCGTGAACGTATGGCCCATTGCATGGAGTGCGAGGTGAGGTTAGGTCTGGCGGGCGG
GGCGGCGTGTCTCTCGAGCGGCTCGCCGTTATGTAGCGGCGGGTCGGGTTCGCCATCCTG
CTCGTCGGTCTCACCGGCCTCAGAGTCTTCATCTTCGGGCTGGGTCGAGTCACCGCTCTC
TTCCTCTGGATACAGTAACAGCGATGCTATTCCCGCATCAGAGCCCTGTGTAGCTCCCGT
CTGAACACTGCGCTGAGCTGACTCAGCATTGTCTTGATCATCAGAATCGCTTTCTGTTTC
GACTTCAGCAAGAAGGTCTAGTTCACTCTCACTTTCGCCACCTTCAGCACGTTCAGTCCC
ATTTTCAACTACAACTTGTTGCTCTTGACCCCTCTCGCCCATTGCATCATCATGATGCTG
CACATCATTTTGCTGGGCAGGCGCAGGAGCATTGGGTTCGTCAGTTTCAGACGCATCGTC
ATCTCCGCCAAGTGCCTCTCCCGCAACGTCATCCGCGTATTCGGTAGCTACCGGTGTCGA
AGAACGATCTGGTGCTAATGAGGAATTTCCCATGGAAGCACCACCGGATGCTGCATTACG
ACCACCAGCAGCATTTGATTCCCTTCGGGTGTGTGGAAGACGCGAGTGTCCGGTCGACAG
TGGTTCCACTCCGAACAAGTCTTCGCTCCCATTCACAAGATCAACATATGTAGTTGCCAG
AGGGAAGGGTGCTGTAGGACGAACAACACCAAGTCGAACTGGGGCAAGTAAAGCATCAGC
GGCTTCTACTAGTTCTTCAACAGAGAGAGCAACTAATGCAGCAAAGACGCGACGGCAACG
GACTAGTGAAGATGTTATCGAAAGTGGTCCTTTCTTTTTGGCAGCACCGGGTGCCATTTC
AACACTAAATATAACAAAAATTCTGGCAACTGAGCGTACAAATCGTCGTGCAACTTCGCG
AGCACGTTCAGCTCGTCCTGGGATCGAATCATTTTGTTGCTCACGAATCAATGTATGCAA
TAGCGTATCCAACATCTCGTTACTTGTACATTTAACTATGAGAGCATGGGTAAACTTGTC
GAGCAGTGTGGTGCCGGACTGGTGCGGCGTGGGGGTGCCGGGCCGACTCTCCTCGCCCGG
GGCACCGCTTGCGCCGCACATCACGGCCGCCTCTACAGCTGGCCAATCCGCGAGCAAATG
CAATAAAGCTCTTCGTGAAAACCGTGGGGGTTCAAGATCATGATCCGGTGCATCTACTTC
AGCATCAGAGCCAGGCTGTTTGCGGGGACCCCGACCTCGTCCTCCACCAGCGCGGAACTG
GCGTTGTTCAACAGCCTGACGACCTACTGTCTGAACTAGAAACAGCAGGATCGATTCACC
CCTTGAGTTAAAATGAGTCGCAAGTTGTGTATCACGGGCGAGGCGAGTCAACAGTTCGCA
TCTAGCCGCCCAGTTGCCACCAACGAGTGCTTTGCACCGGCATTTCTCCCAGCAGTCACA
ATAAGCGGTAGGTGACGTACGTTTTAGCTTACAATCATGTCCTTTGTGGCAAACCTTGGC
ACATTCAGTACAGCAGCATAGAGATCCGGTGAGTCCACAAGTCTTGCATTCAAATATGTC
CTGATTAATATGTTCTTGGCCTGTCCAAGTAAAACTACAGGTGTCATTACAGCAAAGAAC
AAGTAAGGGTGAGTGATCCGGATGTGCATTTGGTGGAAATATGGCTTCTGAGCGCTGTGC
CTCGTCTGCGTCGGAGCACGCGCGTACCGCATCGAGCAACACAAGAGCGGCGCGGTAAGC
GCGCTCGGCCACAGCTGCCATTAACGGAGTTTGTCCCATTCCATCTCTTGCGATAAGCAA
CTGCAAGAGATAGGGCTTGAGCGCAGCACTCTCACAGAGTGCACGTAAGGCAGTAAGAGC
ATTGCCACGACGTTCGGCGGGATCCGAGCTTACTGCACCACCGGAACTATTACCACTGCC
CGATATTTTTCCATTATTAGTTAGTCCCATCAAACTGTCTTCATCACCGGACGCCTCAAA
AGTCTCAGGTGGCCATGATATAGCAGGTACTGCTTCTTCCGCATTTGCTGCAGCTCCAGT
AGTGCCACTTGCGAGATTTGGCATTGAATTTTCGACAATATCAGGCTCCTTATTTGAGGT
AGGAGCACACATATGTATGCAGGCATGAAGAATGTTTCTATTGCCATCACACCGTTCTTG
GAGAATTGATACGATTTGTTGTTTATTATTTTCATTTTCAAGTTGATGTAGCAACTGTCG
GACGCCATCCAAGTCGCAACGGAGAACGCGTGGCATCATCAGCTGGGGCTCGGGTACTAT
TATTATCAGGGCAACCTGTGACTTGAGTGCTGCTTGATGGTGGTGTGGAGCGTGTGGATG
GAGTGGGAGCGCGTGTGCAGCCAGAGCACGGGCCGGCGCCAGGTTCAGCGGGGGCGGCTC
GCGCACCATGCCCACGCAGTCACGTGCCAGTGGGTACATCGCACTGTTCCCGTCCACCAA
CATCACCACAGGCTCGCTTCCCTCAGCAGCAGTGGTGAGCTGGATGGCTTGACCACCTGA
ATGGCCGAGTAGAGCATTGTTGTCCGTGGGGAAGACACTATCAGTGAGTGCACGTGTGGT
TCCCACGGCGTACACGGCATAAGCAAGCGTGCCGCCAGGTCGTCGCACTACTGCGTGCAC
ACCGCGGTTATCAACAGCAATTGTCAAAACTTGCACTTCGGGAGGCAATGCAATCTTTCT
GGGAGAACGCTGTACACAGTCAGGTCCCCGTGGACCAGTAGCTCCTCCTGTCCCACTTTT
GACCGCGACGAGATCATCTTTCTTCACAAGACGACAGTCTTGTAGCAGCGTGGTCCAGTC
ATCTCCAGAAGATGGTACCACTTCTTTCCCATCTTTTCCGATTGTTGGGAATCGTACGGC
AGCATAAGCGCCGTCGACTTTTAGTACACGGCCTAGTGGTACACTTTTAACATCTTCTAG
AAAAACTACTTCCTTGAGAGGCCATTCTTCTTCATCGCGTTTAGATCCATCATTAGAAGA
TCCCTCCTCACCACGCACTGTTACTCTTTTAGCACGTTTATGTGAAGTGCTAGTGTCACT
GCATGTGGATGATGCGGGACTAGGTGGTGGTGGCATATCAAGTCTATCAGCCATGTCTTT
GTTGCTATCTTTGTTGCCATCCTTGTTGTTACCACTGGACGACGAAGCTTTTACCGATGA
AACAGTGAGCGGAGACTGATTCTGTAAATCCCTTTTGTCCTTGTCCGATATAGAGCGATC
TGGTTGAGGTGCTGGCAACAATTTGAAGCGACACATATCTGATAGGTTCCATGCTGCATT
TTGTAGAATACCGACTTTAGGCACTCCCGTAGACATGTTAAAACCAATAGCACCAGGTTG
GTACATAGGCGCATTTTTCATAGTGACACTCTGTCCTGCTTGTAGGTCCTGTGGTGTAGT
GGAAAAATGGCCTCGCTGTTGTTTGCGAGATCTTGCGCGATGCTTCTCCCATAGACGCGC
TCTTTGTCCCAATGGCAAAACTCCCCACCAATAAAGAGCTCCCGAATCTAGCTTCGCAAC
TGTGTACAAAGAGCATACGTGCAAGGATACAGGTTTGTCAGATCCAAATTCCATAAATGG
TTGTAAGGGGTGTTCCAACCGAGACGCACCAGGAGCGTGAGCTATAGATTCATCAAGGAA
TGTAGCGATGCGTCCAGTATCAGTAAGCACAGATACGCGTATGCCAGCCGCGCTAACGTT
GACAATACGTTCACTCGATGTCAATCCCAGCCAGTTGGATCGCGGATGAAAGGCACAATT
GGTACCCTCATTGCGTTGGTATGGGTGCGCATCGGCCCAGCGCCACTGGTAAAGCTGCCC
ATTGGTTGAAATTGCAACCAGTTCACTATACGTTGCAGCAATTCGCGTAAATCTCACATT
ACTATCCCAGTATTCTAGTTCTTCAGAAACCCAAAGAGGCGAAGCTGCCAAACCGGACTC
TTTTTTTTTACTTTCAGTTCCGTCTTTATCCCAAGATGACGTATCTCTAAGGGCTGATTC
CAGCCATCGACGTGGTCCAAAGTACTGACGCTCACGCCAACGAAACTCTGAAGTTCGCTC
TTGGGCTGAGCTGCTGCTCTCACGGCTGGCGCCACTGCGGCCACCGCTGCCACCACCACC
GCCGCCTCCACTGCGACTTCTGATAGCCGCGTACCCGAAGATGTCCTCGGAGAACATTGC
GTCAGCATCAATGATGACGGAGTGGTCCTGTTGCGCTGCATGGAATCCTCCGTCGAGCAG
TGAAATGAGATCCTCAGGAACGTAACCGTCGCCACCTTCACCTCCCTCTGGCTCCTCGCC
CTCTTCATCGTCGCGCGACAGTAGGTTGTTCACCGCAAGATTCACGTCCAGGTTTGTGCG
TTGTAGCTCCCTGATGATGAGGCTTCTACTTTTGCCTTGGAGTACAACTTGAGCCTGTGT
GACAAGATCTTCAGGTACAAAAGGAGCAGGCATAGAAACAACTCGCCCTGAACCTGAAGC
TCCAATTATAACACCAGTGGCACGACTTGTAGACCCTTGAGAACTAGGAGCAGCACGAAT
AGAATTTCTCATAATTCGAGCTCGAGTGCGTGGCTGTTGGCGAGATCCACAACTACCACT
GCTGCCTCCTTGCTTTCCACCACTCGTTCCACCTCCACCACTTCCGCCACCGCCATTTCC
TCCATTCTTGCTAGCATCTGATTTACTCAGGTCCAATCTATCAGGGATGATTGAGAAAGC
AGCTCTACATATGGTTCCATCTTCCAACAAACATGCAATATGGGCAGGCCCAGCAGCAAC
AGCCCGTACACCTCTCAGTGAACTGAGAGCTGAAGAACCTGCACCTGTTCCGTATCGGTT
CCAACGTTCTGCTACTTCTCTAATTCTGTCTATCAACTGATCCTCCGTCCCAGGCAAAGG
ATGAACTACAAAATGCATTGCAGACATTTTCACGATTCTATCCCGTGGAAACTAGATTTC
AAAGCACACTTTAACATTTGTTAAAATTCACCACAGTTATGCACGAACAAAAGAACACCA
TCTACAATTTTCCATCAACCACCATATTTCTCGTGGTTTCTCTTGTAATCGCTTCTCGTA
CTCAAATACATGTGAGTCGGT
(7401 bp)

- SilkBase 1999-2023 -