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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10125_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		alanine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004813 F alanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006419 P alanyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0043039 P tRNA aminoacylation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:20.73 TPM:22.72
ORF EntryO_BomoFB12037_complete:A_BomoFB_comp10125_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTAATTTGTGAACACTGCGAATCACTATCGCTAATTTGTAAGCTGTTAGCTGCG
ATACAAACTTTTTATTTTCTGTAAGCATTTTTAGTGCTGATTTGAAAGAAACTGAAAATG
GATACTTCTATGACTGGCAATGAAATACGAAAGACCTTTATTGATTTTTTTATTAAAAAG
GGTCATAAATATGTACATTCCTCGTCTACCATACCCTTAGATGATCCGACATTACTGTTT
GCAAATGCAGGGATGAATCAATTTAAACCAATTTTCTTAGGTTCCGTAGATCCAAATTCT
GATATGGCTCAGTATATTCGAGTAGTTAACACCCAAAAATGTATTAGAGCAGGTGGAAAA
CACAATGATTTGGATGACGTAGGAAAAGATGTATATCATCATACATTTTTTGAAATGATG
GGAAACTGGTCATTTGGTGACTACTTTAAAAAAGAAATATGTGCTTGGGCTTGGGAACTG
TTAACTGATGTTTTTAAATTATCTAGAGAGAGATTGTATGTAACATATTTTGGAGGAGAC
CCTTCATCTGGTCTTGAACCTGATCTCGAATGCAAAAACATTTGGTTAAACTTGGGAGTC
CCAGAGGCACACATTTTGCCTGGAAGCATGAAGGATAATTTTTGGGAAATGGGTGAAACA
GGTCCTTGTGGCCCGTGTTCAGAACTGCACTATGATCGAATCGGAGAACGAGAAGCTGCC
CATCTTGTAAACATGGATGATCCAGACGTGTTGGAAATTTGGAATCTAGTGTTTATCCAA
TTCAATAGGGAAACAGATGGTTCCCTGAAATTATTACCAAAAAAACATATAGATTGTGGT
TTAGGTCTTGAAAGGTTAGTATCTGTAATTCAAAACAAACGAGCTAATTATGATACTGAT
TTCTTCATGCCAATATTCAAAGCTATTGAAAACGCTACTGGTGTGAGACCATATTCTGGA
AAAGTTGGGATTGATGATGTTGATGGAATAGACATGGCGTATCGTGTCTTGGCTGACCAT
GCTAGAACTCTAACAATTGCTTTATCAGATGGTGGTTGCCCTGATAACACAGGTAGAGGA
TACGTTCTTCGTAGAATTTTGAGAAGAGCTGTGCGATATGCGTCAGAAAAATTAAATGCC
AAGCCTGGATTTTTTGGATCTTTGGTTTATACTGTAGTTGAATTACTAGGTGATGTTTTC
CCAGAAATTAAAAAGGATCCAGATTCCATTGTGCATGTCATAAATGAAGAAGAAGTGCAA
TTTTTAAAAACCCTATTGCGAGGAAGAAATTTACTTTACAGAACAATAGAGAAGCTCAAT
AATTCGAAAACCTTACCTGGTGACGTGGCATGGCGTTTATATGATACTTACGGATTTCCT
ATTGATTTGACTCAATTAATGTGTGAAGAAAAGGGTCTTAATGTAGACATGGAAGGTTAT
GAAAAATCCAGAAAAGAATCTCAATTAGTTTCACAAGGAAAAACCGCAGGCCAGGAAGAC
TTGATAGCATTAGATGTACACGCTATTAGTCATCTACAGGATACTGGAATTCCTGCTACA
GATGATTCTCCAAAATATAATTATTTACCATCATCTACTGACAAAGATGCACTCTATACA
TTTGCTCCGTGTACAGCAAAAATTGTCGCATTAAGGAAAAATAAGGAGTTTGTAAGTGAA
ATAAGTTCGGGACAGGAATGTGGTGTAATACTAGATCGCACTAGCTTTTATGCTGAACAA
GGAGGCCAAATCTTCGATGAAGGTTATATGGTAAAAATTGATGACGAAACTGTTGAATTT
ACAGTAAAAAATGTTCAAGTAAAAGGAGGCTATGTTCTCCACGCAGGAAAGGTCGAGGGA
ATTTTAAAAGTAGGAGATACTCTATCCCTGCACATTGATACAGAAAGACGAAGACTTGTT
ATGAATAATCACACTGGAACCCATGTTCTTAATAACGTTCTAAGAAAAGTTCTTGGCAAT
GATTCAGATCAACGTGGATCGCTAGTAATGCCAGACAGGCTTCGATTTGATTTTACTAAT
AAAGGTCCCATGACAATAAAACAGATCAAAGATACGGAAAACGAAATAAAAGAAATCATT
GCGAAAAATAAAACAGTATACGCAAACTACACAAGCTTGTCTGAAGCAAAAAAAATTAAC
GGATTGCGGGCAATGTTCGATGAACATTATCCTGATCCAGTTAGAGTCGTATCAGTAGGA
GTACCCGTGGAAGACCTTATAAAAAATCCAGACGCTCCTACAGGATTCGAAACATCTGTT
GAATTTTGTGGTGGATCCCACTTACACCGGACTAGCCATATTGGGGAATATGTCATTGTG
AGTGAAGAAGGTATTGCAAAAGGAATCAGAAGAATTGTTGCAGTGACTGGACCAGAAGCG
ATAAAAGCTATCAACAAATTAAGTGTTCTTGAAAACGAGGTTAATAATGTTGCCAATTTT
ATAAAAGAACAAAATGAAAGTATTTCTCATAAAGAAGTATCTAAGAAAATAGTGGATCTG
ACGAACGAGATATCCCAAGCCCAAATATCATATTGGAAAAAAGATGAATTAAGAAATATG
CTGAAGAACTTAAAAAAACAACTAGATGATAAAGAAAGAGCCGAAAAAGCTATAATTATT
ACTCAAGTCACAGAAAAAGCAAAAGAGCTATGTCTTGAACGCAAAGAATCAAAATATATT
GTATCCGAATTAAAGGCGTTTGGAAATACCAAAGCTTTAGATGGTGCTTTAAAACAAGTG
AAACAATTTTGCCCAAACTCAGCTGCGATGTTCTTTTCTGTTGATAAAGACGCTAATAAG
ATTTATTGCTTGGCAGCTGTGCCCAAAAGTGATGTAGAAAAGGGATTGTTAGCTTCAGAA
TGGGTGCAATCCGTTGTAGACATTATAGGTGGCAAAGGTGGTGGCAAAGCTGAGTCAGCT
CAAGCATCTGGGAACAATCCTAATAGTTTAAATGAAGCTATCCAAATTGCAAATGAATAT
GCTAAGTCTAAATTAAATTAAATAAACGTACAACACGTGCATAAATATAATATATTATGT
GAATATTGGTTTGTCAAAATATATATAAACTGTGATT
(3097 bp)

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