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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10123_c0_seq1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		clathrin_heavy_chain_[Bombyx_mori]
Ontology
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005802 C trans-Golgi network
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007291 P sperm individualization
GO:0007594 P puparial adhesion
GO:0008021 C synaptic vesicle
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0016020 C membrane
GO:0016079 P synaptic vesicle exocytosis
GO:0016183 P synaptic vesicle coating
GO:0016192 P vesicle-mediated transport
GO:0030125 C clathrin vesicle coat
GO:0030129 C clathrin coat of synaptic vesicle
GO:0030130 C clathrin coat of trans-Golgi network vesicle
GO:0030132 C clathrin coat of coated pit
GO:0030135 C coated vesicle
GO:0030136 C clathrin-coated vesicle
GO:0030141 C secretory granule
GO:0030198 P extracellular matrix organization
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032051 F clathrin light chain binding
GO:0033227 P dsRNA transport
GO:0033363 P secretory granule organization
GO:0035002 P liquid clearance, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0040008 P regulation of growth
GO:0045451 P pole plasm oskar mRNA localization
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045807 P positive regulation of endocytosis
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048471 C perinuclear region of cytoplasm
GO:0048749 P compound eye development
GO:0071439 C clathrin complex
Transcript
Level		FPKM:26.64 TPM:29.19
ORF EntryO_BomoFB11983_complete:A_BomoFB_comp10123_c0_seq1
Sequence
(Nucleotide)
ACCATTTCATTCATTTGTATATGTGGCATCCGAGGGTGTACATTATTCGTCATATTACTC
CGAAACAGCCAAATTTATCCGCCCCTATTCTTCTTCATGTAGAATTCTAGAAGTTAGTTC
GCGATTTTAAAAGGGTCGCCCGTTTTTTCGTTTTCGGTTTGTGTAGGACGGAGTGATCAA
TAAACATGGCGCAAGTATTACCGATACGGTTTCAAGAACATTTACAGCTTACCAATGTGG
GAATCAATCCTGCTTCTATTTCTTTCAACACTCTCACCATGGAATCGGACAAGTTTATCT
GTGTTCGCGAGAAGGTTGGTGAGACTGCAGAAGTTGTCATTATTGATATGGCAGATCCAA
CAAATCCAATTCGACGACCAATCAGTGCAGACTCTGCTATCATGAATCCAGCTAGTAAAG
TCATTGCTTTGAAAGGCAAAGCTGGTGTTGAAGCTCAAAAAACACTTCAAATCTTCAACA
TCGAGATGAAATCCAAAATGAAGGCGCACACCATGACCGAAGACATTGTTTTCTGGAAGT
GGATTTCACTGAACACACTCGCTCTGGTCACCAAGATGTCGGTGTACCACTGGTCGATGG
AAGGCGACTCGACACCCGTAAAGATGTTCGACAGGCATTCGTCGCTTGCCGATTGCCAGA
TCATTAACTACAGGACGGATCCGAAGCAACAGTGGTTACTGCTGGTCGGTATTTCTGCTC
AACAAAACCGGGTAGTCGGAGCTATGCAGCTGTACTCTGTCGAGCGCAAGTGCTCTCAGC
CTATCGAGGGACACGCCGCGTCATTCGCCACATTCAAAGCGGAAGGCAACGCCGAGCCGT
CCACTCTCTTCTGCTTCGCTGTGAGGACTGCCCAAGGCGGCAAACTACACATTATTGAGG
TTGGCCAAACGCCGGCCGGCAACCAACCATTTCCGAAGAAAGCCGTCGACGTGTTCTTCC
CAGCGGAGGCGCAGAATGATTTCCCAGTGGCGATGCAAGTATCGCCGAAGTATGACGTCA
TTTACTTGATTACCAAATATGGATACATTCACATGTACGACATCGAGACGGGAACGTGCA
TTTACATGAACCGTATCTCGTCGGACACGATCTTCGTGACAGCGCCCCATGAAGCGACTG
GTGGTATTATCGGTGTAAACCGCAAAGGTCAAGTGCTATCAGTGACGGTAGAGGAAGACT
CAATAGTTCCGTACATAAACACCGTGCTCCAGAACCCCGAGTTAGCGTTACGCATGGCCG
TGCGTAACAACTTGGCAGGTGCTGAAGAACTGTTTGTGAGGAAATTCAACATGTTGTTCA
CGAATGGACAATACATTGAGGCTGCTAAGGTAGCAGCTATGGCACCTCGAGGAATCCTCC
GTACACCGCAAACTATCCAGCGTTTCCAACAAGTGCCCACGCAGCCAGGTCAAAATTCGC
CGTTGTTGCAATACTTTGGTATCCTCCTTGATCAGGCGCAACTCAACAAGTTTGAATCCC
TTGAATTGTGTCGTCCTGTTTTATTGCAAGGGCGAAAACAACTGCTCGAGAAATGGTTGA
AGGAAGAAAAATTGGAGTGCTCAGAAGAACTCGGAGATCTTGTAAAGCAAGTAGACCCTA
CACTTGCTCTCTCAGTTTACCTTCGTGCCAACGTCGCCAGTAAAGTTATTCAGTGCTTTG
CTGAGACTGGGCAATTCCAGAAAATTGTATTATATGCCAAGAAGGTTGGCTACACTCCAG
ACTACATTTATCTTCTTCGTTCAGTGATGCGTACTAATCCTGAACAAGGGGCGGGATTTG
CAGGAATGTTAGTCGCCGAAGATCCCCCTCTAGCAGACATCAATCAGATAGTAGATGTTT
TCATGGAACAAAATATGGTGCAACAATGTACAGCCTTCCTTTTGGACGCTCTGAAGAATA
ACAGACCTGAGGAAGGACCTTTACAAACTAGGCTTCTAGAAATGAACTTGATGTCAGCGC
CGCAGGTAGCAGATGCGATCCTCGGCAACGCGATGTTCACGCAGTACGATCGCGCGCACG
TTGCTCAACTCTGCGAGAAGGCTGGATTGTTACAACGGGCGCTTGAGCATTACACTGACT
TATATGACATCAAGAGAGCTGTTGTACATACTCACCTTTTACCAGCTGACTGGCTTGTCA
CATACTTCGGAAGTTTGTCTGTAGAGGACTCCCTTGAATGTTTGAAAGCAATGCTTCAGG
CTAACATCCGTCAGAATCTGCAGATTTGTGTCCAGATCGCCACTAAATACCATGAGCAAC
TAACAACAAAGGCTTTAATTGAATTGTTTGAGAGTTTCAAAACATATGAAGGGTTGTTCT
ATTTCCTGGGATCAATTGTAAACTTCAGCCAGGATCCAGAAGTCCACTTTAAATATATTC
AGGCTGCATGTAAGACTGGTCAAATCAAGGAAGTGGAGCGTATCTGTCGCGAATCCAGCT
GTTACAACCCAGAGCGCGTGAAGAATTTCCTCAAAGAAGCAAAGCTTCCCGACCAGTTGC
CTCTTATCATAGTTTGTGATAGATTCGACTTTGTTCACGACTTGGTTTTGTACTTATATA
GAAACAGTCTTCAGAAATATATTGAGATTTATGTACAAAAGGTTAATCCTTCTCGTCTGC
CAGTCGTAGTTGGTGGCTTGTTAGATGTTGATTGTGCTGAAGACATCATTAAGAACCTGA
TCTTGGTTGTTCGGGGACAGTTTTCGACTGATGAATTGGTTGCTGAAGTGGAAAAGAGGA
ATAGACTGAAACTCCTCCTTCCTTGGCTGGAAACAAGAGTACATGAGGGCAGCAACGAAC
CAGCCACACATAATGCTCTAGCCAAAATCTACATTGATTCCAACAACAATCCTGAGAGAT
TCCTCAGAGAAAATCAGTGGTATGACTCCCGCGTGGTTGGCCGCTACTGCGAGAAGCGCG
ACCCGCACTTGGCGTGCGTGGCGTACGAGCGCGGACAGTGCGACCGCGAGCTCATCGCCG
TCTGCAACGACAACTCTCTCTTTAAGACCCAGGCTCGCTACCTGGTGCGCAGGAAGGATC
AAGACCTCTGGCTCGAGGTGCTCTCTGAGGAGAATCCTTACAAGAGGCAACTTATTGACC
AGGTGGTGCAAACAGCTCTTTCTGAAACCCAAGATCCTGAAGATATCTCTGTTACTGTAA
AAGCTTTCATGACAGCCGACCTACCCAACGAACTCATTGAGCTGCTTGAAAAGATTGTTC
TTGACAATTCTGTGTTCTCTGATCACAGGAACCTTCAGAACCTTTTGATTCTTACTGCTA
TCAAGGCGGACCGTTCTCGTGTAATGGAATACATCAATCGTTTGGATAACTACGACGCAC
CTGATATCGCCAACATTGCTATCAACAATGAATTATACGAGGAGGCATTCGCTATCTTCA
AAAAATTCGATGTTAATACTTCTGCTATACAAGTACTGATTGAACAAGTGAAAGATCTCG
AACGTGCCTATGAATTTGCCGAGCGATGCAACGAGCCTGGTGTTTGGTCTCAGCTCGCAA
AGGCTCAACTACAGCAAGGTCTGGTCAAGGAAGCCATCGACTCTTACATAAAAGCGGACG
ATCCCTCCGCTTACATGGACGTTGTCGCTACTGCTACCAAGCAAGAGTCTTGGGATGATC
TTGTTAGGTATTTGCAGATGGCCCGGAAGAAGGCGCGCGAATCGTACATAGAGTCCGAAC
TGATCTACGCTTACGCCCGCACCGGTCGCCTCGCCGATCTGGAAGAGTTTATCTCTGGCC
CGAATCATGCTGACATCCAGAAAATCGGTGACCGTTGTTTCGACGATAAGATGTACAACG
CTGCGAAACTCTTGTATAACAACGTCAGCAACTTCGCTCGTCTTGCCATTACTTTGGTGC
ATCTGAAAGAATTCCAAGGTGCCGTGGACAGCGCGCGTAAGGCCAACTCTACGCGTACAT
GGAAGGAGGTCTGCTTCGCGTGCGTGGACGCCGGTGAATTTAGACTCGCGCAAATGTGCG
GATTGCACATTGTAGTACATGCTGACGAACTTGAAGACCTCATCAATTACTACCAGGACC
GAGGTCACTTTGACGAGCTGATCAGCTTGTTAGAAGCTGCCTTAGGGCTGGAGAGAGCTC
ACATGGGAATGTTCACTGAACTCGCCATCTTGTATTCAAAATACAAGCCCGTGAAGATGA
GGGAGCACCTCGAACTGTTCTGGTCACGCGTTAACATTCCCAAGGTACTCCGTGCTGCTG
AACATGCCCATCTTTGGTCAGAGCTGGTATTCCTGTATGACAAGTATGAGGAGTATGACA
ACGCTGCTCTCACGATGATGCAGCATCCCACCGAGGCTTGGCGCGAGGGACACTTCAAAG
ACATAATTACTAAAGTCGCGAACATGGAACTGTACTACAAAGCTATCCAATTTTACCTAG
ACTACAAGCCACTTCTCCTTAACGATCTACTGTTAGTACTGGCCCCACGCATGGATCACA
CCCGAGCAGTTAACTTCTTCACCAAAGCTGGTCATCTGCAACTAGTGAAGGCCTATTTAA
GATCAGTGCAGAGTTTGAACAATAAGGCTGTTAATGAAGCATTGAACTCGCTGCTTATTG
ATGAGGAGGATTATCAAGGCTTAAGAACATCGATCGACGCCTTCGACAACTTCGACACTA
TTGCGTTAGCGCAACAGTTGGAGAAACACGAACTTACAGAATTCAGACGGATTGCCGCCT
ACTTATACAAAGGTAATAACAGATGGAAGCAAAGCGTGGAGCTCTGTAAGAAAGACGCTT
TGTACGCCGATGCAATGGAGTATGCATCGGAGTCGCGCCAGCCCGAGGTCGCCGAAGAGC
TCCTCAACTGGTTCTTGGAAAGAGATAATTTCGAATGTTTCTCGGCTTGCTTATATCAGT
GTTACGATCTCTTGAAACCCGATGTTGTCATCGAGCTCGCATGGAGACATAACATCATGG
ACTTTGCCATGCCCTATCTTATTCAGACAGTTCGCGAGTTGACAACTAAAGTAGAGAAGC
TTGAAGAAGCAGACGCCAAGCGAAGCACCGAGAATGCGGAGCACGAAGCGAAGCCCACCA
TGATAATAGAACCACAACTCATGCTGACTGCCAGTCCATCGATGCCGTACGTGGTGCCGC
CCCAGCCGTCGCAGTACGGGTACACTGCGCAGGCGCCCTCGCCCGCCCCCTACCACGGGT
ACGGCATGTAGAACGCCGCCACCCGCCTCGTCTGGGGGAACCTCGCTCCCTACTGAGACA
GGCGCCCTCCCACACACCGACACTACACCACACGATTCGAGGCCATGACACTCAGAATGT
CCTTATCGCCTACACAAAAACTTCAGTCTCGACAAAAAAATATAAATTATGTTGTTAAGT
ACTTGTAACTTTCACACATTTCCATCTAACAATATACCGCTATATATGGAGAACCTTAAT
TAATTTTAAACATTTATGGCGGTAGTACTTTCTATGTTTGCAGTAGGTACATTTTGCTAA
ACAAAATTATTATATTGAGAGGAATACTCATTTAGCTGATTTAGCTCTCGAGCCCTCCTC
AGAACGAGATTTACGTGAATATTTCAATAGCGACCAGATATAAACTTATATATATATAAT
AATATATGCTGTGCCCTCACAACCTTCGTAATTGTTACGTAAAATCCCTTGATGATTTAA
TTTTTCTGCGATGCTGTGGCCTAATCTTTCATTTATATTAACATGATTTCAAAATTAATC
TGTCGGTAAAGCTGAGGGGTGCTTTCTCTGCTGCTTCTTCTGCTGGTCCTTTGAGAATCA
TACAATTTAGCGTGTACAAATTATATTAGTATAGTCGCTAATCGACTATGTATTGTTAAA
AGTGCTTTATTTTTAAATAAAATGAGTTTTCAAAATATAAAGCTTCTTAAACAGATACTA
TAATTCAACCGTATGTAACGTGCATTCTGCGAATATAGAGATATGTATACTAATATTCTA
ATTTTGCAGTTTCTATAAACGAACGTAGTTGATTAAAAAAATGTATAATATTTAAACTAA
AAGATTCCATGTGATAGATATTGTTGAAGATAATACAGCCGAAGATATATATTGAATTAT
TTCAGTGAAAGCTTGGTTCGCCACTACGTAAATAAATAAGTAAATTAATGAATTTACTTA
TGTACATAATTGGCGGTACTTTATCATTGCTTTCTCACATCTGAGAATTACATTAAATTA
TTACATAAAATATAATCTACTTAAAGATAATTTATATTCATTGTAATGAAACAAGAAATC
ATTTTGGTCGAACGAAAATTAATTAATATTATATTCTCTACCGTGCAATAATTTCAGTTC
TCTCATAAAGAAGAGATGCTTAATATATTGTAATATGTATATAATGTTTACAGTTTTGAG
CCAGTTGAAATTAAAAAGGAAAAATGTTTATTATTCGATTATGAATATTATTTAGATATG
ATTAGGTTTAGTTTTAGACGGAAAATAGTGGTATGATGTTAATTTTTGTGTAATGTATGT
GTGCGAGTGTGTAAGCGGACCGCACGCACGTGATCACCTGAATTTGATGCCTTCACTTAG
ATAGTTAGAACGCGTATAGAGGACGCGTTTTTTTTTCTATTTTGTTAATTTTTTTTGAAC
ACAAGGTCTAATTCCTCGAGTTATGGTATTAGTAATCTAAAGTTTATCTCGGTTCCGCAT
ACAGTTATATAGTAATAACCGTATAGCCGCGAGTCGCTAATGTAGAACGTTGAATCATTC
AAATAATCATTCCTGTAAAGAAAATGAAGTAACGAAATAATCTATACATTGTTGCGAAAT
GTTTAAAACCTTCTTTCGAAGATTTATAGAGAATTATCTAAATGTAGAAGGAAAGTTCAT
TGTTTAATGGTTAGAATTGTATTTATTCATGTATGATACTG
(6941 bp)

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