SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10112_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_calcium_channel_flower_isoform_X1_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0005262 F calcium channel activity
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006897 P endocytosis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030285 C integral component of synaptic vesicle membrane
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0046530 P photoreceptor cell differentiation
GO:0048488 P synaptic vesicle endocytosis
GO:0070588 P calcium ion transmembrane transport
Transcript
Level		FPKM:5.09 TPM:5.58
ORF EntryO_BomoFB11921_3prime_partial:A_BomoFB_comp10112_c0_seq1
Sequence
(Nucleotide)
GGTTTCGTTGACAGCGCAGGTGGTATTGGCAGGTTGAATTGATTTTCACAAAAATGTCGT
TAACGGACAAGATATCGATGCTCATGTCGCGTCCGGGGGGTGACAATGCCCAGAAAGATG
ACGTTCCTACTTGGATGCGATATGCTGGACGGGGTCTTGGAACAGTTGGCAGCTTCATCG
CCATCTTCTTTGGTCTCTTCAACTGCTTGGGCATTCTAACCTTGGACGTGCCGTGCCTGA
TCGCGGGCATATGGCAGATGCTTGCTGGTTTCATTGTCATAGTATGCGAGGCTCCCTGCT
GCTGTTTCTTCATCGACTACGTGGGGACCTTGAGCCAGAAAATGGAGACCAGACCTTATT
GGAACAAGGCCGCTATGTATCTTGGACTGGCCGTGCCTCCGTTTTTCCTTTGCTTCTTCA
GTTTCAGTACGTGGTTGGGTAGCGGACTGATATTCGCCACCGGGATCATATACGGAATGA
TGGCGCTCGGCAAAAAAGCGTCAATAGAGGACATGCGGTCGTCGGCGGCCAATCTGGAGG
CGGGCGTGGGGCCAACAACCGCGCCCCGAGCAACCCTCGTTACCAACGAGCAGCCCGTCA
GCTTCACCGGCACGCCTGTCACCAAGTGACCGCTCACCTTCCGCAAAGTTATGCGCTCCT
AGTACTTGGACGTGAGACTTTTCATTTTTCAGAATATCATTTACTTCCTCAATAGTCGAG
TTCCCTGGTACTTTTTGAAGGGCGACGTTCGAATTCCGAATTCAGACGTGTATTTTTTTT
AAAACTTCTCTTGAAGTTATGTTTGCCTGGTAGTTGCTTCAAATGTTTTGTTAATCATAT
ACAATTTTTGTAGTTAGTATATTTTATAGTTTTTAGGTTATTTATCAATTTTCTTTATCG
TTACTTATAGTAAGGTCTTTTTAATATTAATACCAATTGAGGCTGTACATTGTAAAATGA
CATGATCTTAATTAGGTAAACTTTTTATGTGCTCAAAGTGTTTTAAAACACAATGGGGAA
AGTTACTAAAGTTAAAACGAGAGAACCGTTAAATTTCCAGGTGTTCTGCATAGGGTTGCC
AGGAGCGTATAAATTAATGTTTTTTTTTCCAAATTGTTTCGTACTGAATTGTTTAAAAGA
CGTTACTACCTATGTTATTTATTAAGATTTATTTTGTAAGTTGCTTTCAATTTCGACGAG
ACTCATAATAACTTATTTTAGGTAATACAAATATATTTTTAAACTCTAGAAACTTTTACG
ATTCCAATGTTAAAAAATTGTGAATTGTCGGTCAAATTATATTATCGACCTTCAAATTTC
TGCTGCTGCTGTATGCTTTGTTTCAAAGGATATTGTCGCCGTCTTTCAGCATGTCTCAAG
GTTACCATAGCCATGATTTCCAGGATGCCTAAAAAATCAAAGGAAAATATCTGTTTTGCC
ATGTAAACCGATATGGCAACTTTGTTTTTAGAACATCAAGTAAAAAACAATATGAAATCA
TTTCAATCAAAATGTTTTATTGGCAGCCTAATATTATTAATTTATGTAAAAAAAGGGCTG
TAATTTTTTTCTTCATTTATAAATGTATTTACGCGCATATCCAGACGCTGTCGTTGAAAA
GGTAAATCAGATGTGTAGGTATATGAATAGTATAATGCATGTTCACTTGTTAAGTAGTAC
TTGTAGGTTTGTTCGTAATTGTAAAGTCGCGTTGTAGATATTACAGAAGTACAGAGGTTG
AATAGGTTTCGTCTAGCGAAATTTTGTGATGTGGTAACACTATACCTATTCATTGATGCA
AAGGCTATAAGGTCTTGTAACCATTGGCCGTAAATAAAAAATAAAAAAAAGCATTGATGC
AAACAACAATAAATTTATTAATCAGACAAGTATGTAGTAATGCTGTCTATTCCTACATTT
ATTTATTAGATAAATTTAATAGCAAATTTGTAAAGTAAATTAGTTATCAGTCAAATATAA
AGTTTAGATGAAATATTACGGGAGAACGATTG
(2012 bp)

- SilkBase 1999-2023 -