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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10062_c0_seq7
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_heat_shock_factor-d_isoform_X3_[Bombyx_mori]
Ontology
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009408 P response to heat
GO:0022008 P neurogenesis
GO:0031427 P response to methotrexate
GO:0042742 P defense response to bacterium
GO:0042802 F identical protein binding
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:0.51 TPM:0.56
ORF EntryO_BomoFB11605_complete:A_BomoFB_comp10062_c0_seq7
Sequence
(Nucleotide)
ATGTTATCTTACTTTGTTCCTATAGACAAATTTTATTTTAGTCTTAATTTTTATACGCGA
GTTGTAAAATAGTAATCATCATCACAATAACAAATGTAGATAATCAGGGTCTAAACATAA
CAGATTTGCATAGAAATAAATTTTTCATGGACTAAATCTGGAATAGCACATTTATTTAGG
TTATAATGCAATGTTAATATAAAAATATTTAATAGCTTGAAAAACATGTATTAAAATTAA
CTTTGGGTTCGAGACCAGATTGATCAATGATGTGCTTGGATGAAAATCACCACATAAATT
ATTATTACTGCCTTTGAAAAAGGAGAAGCTCTTAACGAGCATGGGGTGAATAAAAATGCA
CATAATACTTTTACTGATTTCATACAACGTATAGGCAGTGCAGGTTATGAACGTTTAAAA
CGTATTTATAATAAATACACATTTGATAACATTCAGTTTCATTTTAACAACAAAAAAATA
TTTTCCTGTGCCAAATTACATTTTGGGTTTTTTATTAATATTTACCATCATCGCACATAC
AAACCCTGGTATGCTAACTAAATACATTATTTTGTATATAAATATATTTATGCGAATGGT
ACTTTTTTAAACAAATCGGCAGTCATACTGCAAAAAAAAAACTAAAATAAATCACAATTG
TATAACAAACAAAAATAATTCTTTAGACATCGAACAACAATCATCAGTTCTTTTTGTGAA
GCTTTGCAGCTGTCGACTTTCAAATACGAGGCAATCTTACCGCGCAGTTAATTTACACTA
TGGATACATATGTACAAATTTGTATAAGTGAAATTGCTACTAAAGTTAATCCTTATCTAC
ACACTGAAGTTTTGCTGTTTTGTCAAACGCTATGAATACAAAAGCTTTACATAGTTACAT
ATTATAATACAAAATGTACACATTGCTACTGGATATTGTAAACTTGACATATTTTTATAT
TTCTACAGACTACTCATATAAAGTTTGATATTATATAATCTTTATTTTAAGGCACCAAAG
CAGCAATTTATTGAGAGTTATCACGTTATTACGCAGTACGTACACACTACAATACTAATT
CATTAGCTGATTAAAGAGAAATCGCAATTCTATCAAACAGAAAAACTATGTAATACAATA
CAAAACTGCTAAAACGTTTCCCGTTTAAGCAATAATAATATAAGATGCTGTATTGGTAAA
ATATTACAAGATATACCCATAATACATTGAGAACAGTCTTGAACATTTTCCCACATACCC
ATGTTATTAGTCCGTTATTTTCAACACACTCATCACTATTATACTTTAGTTCATAATTGA
CATTGTGTCACTTTTTTGAAGACCGCTTCTCATGAGGTGTTTCCAGTTAACCTTGCTTCA
TGGTTTGAGATTAAAGGAAGGTGATCTGACCTGCACCTGAGGAGTATTGAGCGTCGAGCT
GCTGACTTCAGGTGATAAACAACCTTCCTGAGAGTTTTCACTCTCTAAATCTGGCATATT
TATATCCTCAAAGTCTGGAATATTTCCTGTATACGAGATAAGCTGATTCCCTTCAACAAC
ATTGTTAGATGTTTTCGCCCTTTCGTCGGCGGGGTTGTACGATAAGCCGTAAAATGGATC
GTCCGATCCGAATAACCCCATTAAAGTATTAGTATCCAAAGCATAACTGTCGCTTCGCAG
TAGTTCTCTTAACGATTCAAGGTCCGATTGCATTGCGTCTAAATGATCGTCAAGGTCATT
CTTGTTAGAATTTGTTCCAAAATGAGAAGAGTATTCTTCCCAATTTTTGCTGATGTTATC
TCTCCTATTCCTTGTTTGGAATCTGTTTATTTTGTTGTTCGTATTATTGTTCACTGTTGC
AAGAGTCATATTGTTCCAATCAAAATCATCTTGAAGCTCAGTCTTGATTGCCGCTAAGTT
AATGTTCTGTGTGTCGTCTTTATTGGACTTCTTAGACTTTTTGGAAGGTTTAAGTCCTTC
ATTTACTTTTTCTACTTTTATGTTAATACCACCCAACATTTTGTCTTTAGTTGAAGATAC
CATTGGGTCCTCATCAACATCCTGAAGTATATTTTCTATTCCTGTTTCCTCAGCAGTCAG
TATCCCCACATCACTTACAGAATCATCACTTGCAAATATTTCAGCTGGAAGCTTAAAATC
AGCAGACGGGTTGAAACTGCTGGGAGATATTAAGCTTCTAGTATTGGAACTAGTAGTCTT
GATACGAGGTTTGGTCTTTGAAGTGCTTGGTGTAATCGTAAATACATTATTAATCGCTGG
ACTCTGGTTTAAAGGTGATGAAGGTTTACCCTGAGTTGGAGATGGGGAAGTAATTACTGG
CAAATCCTCATTGAATCGTAGTCTATTACTCTTGACAGGATATGCGATTTTATTGCCTCC
TGATTCAATATCATCACCGTCTTCCATGGTGACATGGTATTGAATATTGGATAATGGGTT
TGCTACATTTTGATTATCAGTGATATTATTCAAATCTGTAGCTACAAAGAATGTAGGGTC
AATGGCATCTTGGGAGGATTCATTTTGCAGTATGTCATCATGTGCCAATTCATGTATTGT
AGGTCCATCCTCCAAATTTTCATCACTTATCTCCTCCAATAAAGGATCCTTGTCTAGCTT
AATATTTTTTAATCTTCCTGGATAAGAGCTTTCAGTGGCAGAATTATGAGCGGCATTATT
TATCATCAACTGATATGGTCTCTTGACTCCAACATTATTGCCGTTAGTATTAGGGGGTCT
TGCTGGTTGCACCAATGACATCAAAAATTGAATGAGATTGTTCACTATTTGCTGTTGTTT
GATATGCTTCTGCCGCAAAATAGCGACTTCTCTCCATAGTGCTTCATTCTCTTGTTTCAT
TGCACTAAATTTGGCATCGAGGCTTTCTTGTTTTCCTTTCATTTGTTTCACATCAGCTAA
AACTTTATTCATAAGCTCAGGCTTTAACAAAATTTTTTCACCACTTTCATTGCTTGTTAC
AACAGATTTTGGAATTGCAATTTTTCTTTTAATATGTTCCAACAAATATGCATGTCCTTT
CATAAAACAGGGATGCGAAAACTCTATTTCGTCTTTTTCATATCTCAAGCCGCCATTTTC
AACAGATGTTATTTTATGAAATCCATACATGTTAAGTTGTCTTATAAAACTTGCCATATT
GTTGTGTTTGTAGTACAGTGGTAAAAGTTCTCTAGCAAAATCTGCCTGATTTTTTATGAC
AAACGTCTTTCCACCCGGACTCCAAGATATCAATTGATTTGTTTCAGAATCATTAACCAA
TTTCCACAGTTTCCCAAGAAACGCAGGGACACTTGCCCCAATTTCGACAACGGAACGCAT
TTTTTAAATAAATTCTACTGAAATCACATAAAATGTAAAGTCTTCAAATTATCTCACGGT
ATTTTTTAAGAAAATTATCAAGTTCGGCAATACACTGCTCAGATCGCCATTTTAATTATA
AACACACACAACTAAAATATTCCGAAAAGATTACAACGCACACTAACGCAATTTTTACGT
AACTACATAGCTGGTGTAACACATACAAACTACAGCACAGAGACGTCAATAATCAAACCA
G
(3601 bp)

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