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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10062_c0_seq5
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		heat_shock_factor-d_[Bombyx_mori]
Ontology
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009408 P response to heat
GO:0022008 P neurogenesis
GO:0031427 P response to methotrexate
GO:0042742 P defense response to bacterium
GO:0042802 F identical protein binding
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:1.60 TPM:1.75
ORF EntryO_BomoFB11601_complete:A_BomoFB_comp10062_c0_seq5
Sequence
(Nucleotide)
CATAATTATTATAATATAAAGTATCTGCATATGCCGCTAGAACCTTTTTTTTTTTAAATC
TATTATGGACAAAAAAATCATACCCCCATTAAAGTATTAGTATCCAAAGCATAACTGTCG
CTTCGCAGTAGTTCTCTTAACGATTCAAGGTCCGATTGCATTGCGTCTAAATGATCGTCA
AGGTCATTCTTGTTAGAATTTGTTCCAAAATGAGAAGAGTATTCTTCCCAATTTTTGCTG
ATGTTATCTCTCCTATTCCTTGTTTGGAATCTGTTTATTTTGTTGTTCGTATTATTGTTC
ACTGTTGCAAGAGTCATATTGTTCCAATCAAAATCATCTTGAAGCTCAGTCTTGATTGCC
GCTAAGTTAATGTTCTGTGTGTCGTCTTTATTGGACTTCTTAGACTTTTTGGAAGGTTTA
AGTCCTTCATTTACTTTTTCTACTTTTATGTTAATACCACCCAACATTTTGTCTTTAGTT
GAAGATACCATTGGGTCCTCATCAACATCCTGAAGTATATTTTCTATTCCTGTTTCCTCA
GCAGTCAGTATCCCCACATCACTTACAGAATCATCACTTGCAAATATTTCAGCTGGAAGC
TTAAAATCAGCAGACGGGTTGAAACTGCTGGGAGATATTAAGCTTCTAGTATTGGAACTA
GTAGTCTTGATACGAGGTTTGGTCTTTGAAGTGCTTGGTGTAATCGTAAATACATTATTA
ATCGCTGGACTCTGGTTTAAAGGTGATGAAGGTTTACCCTGAGTTGGAGATGGGGAAGTA
ATTACTGGCAAATCCTCATTGAATCGTAGTCTATTACTCTTGACAGGATATGCGATTTTA
TTGCCTCCTGATTCAATATCATCACCGTCTTCCATGGTGACATGGTATTGAATATTGGAT
AATGGGTTTGCTACATTTTGATTATCAGTGATATTATTCAAATCTGTAGCTACAAAGAAT
GTAGGGTCAATGGCATCTTGGGAGGATTCATTTTGCAGTATGTCATCATGTGCCAATTCA
TGTATTGTAGGTCCATCCTCCAAATTTTCATCACTTATCTCCTCCAATAAAGGATCCTTG
TCTAGCTTAATATTTTTTAATCTTCCTGGATAAGAGCTTTCAGTGGCAGAATTATGAGCG
GCATTATTTATCATCAACTGATATGGTCTCTTGACTCCAACATTATTGCCGTTAGTATTA
GGGGGTCTTGCTGGTTGCACCAATGACATCAAAAATTGAATGAGATTGTTCACTATTTGC
TGTTGTTTGATATGCTTCTGCCGCAAAATAGCGACTTCTCTCCATAGTGCTTCATTCTCT
TGTTTCATTGCACTAAATTTGGCATCGAGGCTTTCTTGTTTTCCTTTCATTTGTTTCACA
TCAGCTAAAACTTTATTCATAAGCTCAGGCTTTAACAAAATTTTTTCACCACTTTCATTG
CTTGTTACAACAGATTTTGGAATTGCAATTTTTCTTTTAATATGTTCCAACAAATATGCA
TGTCCTTTCATAAAACAGGGATGCGAAAACTCTATTTCGTCTTTTTCATATCTCAAGCCG
CCATTTTCAACAGATGTTATTTTATGAAATCCATACATGTTAAGTTGTCTTATAAAACTT
GCCATATTGTTGTGTTTGTAGTACAGTGGTAAAAGTTCTCTAGCAAAATCTGCCTGATTT
TTTATGACAAACGTCTTTCCACCCGGACTCCAAGATATCAATTGATTTGTTTCAGAATCA
TTAACCAATTTCCACAGTTTCCCAAGAAACGCAGGGACACTTGCCCCAATTTCGACAACG
GAACGCATTTTTTAAATAAATTCTACTGAAATCACATAAAATGTAAAGTCTTCAAATTAT
CTCACGGTATTTTTTAAGAAAATTATCAAGTTCGGCAATACACTGCTCAGATCGCCATTT
TAATTATAAACACACACAACTAAAATATTCCGAAAAGATTACAACGCACACTAACGCAAT
TTTTACGTAACTACATAGCTGGTGTAACACATACAAACTACAGCACAGAGACGTCAATAA
TCAAACCAG
(2049 bp)

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