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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10062_c0_seq3
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_heat_shock_factor-d_isoform_X5_[Bombyx_mori]
Ontology
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009408 P response to heat
GO:0022008 P neurogenesis
GO:0031427 P response to methotrexate
GO:0042742 P defense response to bacterium
GO:0042802 F identical protein binding
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:0.74 TPM:0.81
ORF EntryO_BomoFB11597_complete:A_BomoFB_comp10062_c0_seq3
Sequence
(Nucleotide)
ATGTTATCTTACTTTGTTCCTATAGACAAATTTTATTTTAGTCTTAATTTTTATACGCGA
GTTGTAAAATAGTAATCATCATCACAATAACAAATGTAGATAATCAGGGTCTAAACATAA
CAGATTTGCATAGAAATAAATTTTTCATGGACTAAATCTGGAATAGCACATTTATTTAGG
TTATAATGCAATGTTAATATAAAAATATTTAATAGCTTGAAAAACATGTATTAAAATTAA
CTTTGGGTTCGAGACCAGATTGATCAATGATGTGCTTGGATGAAAATCACCACATAAATT
ATTATTACTGCCTTTGAAAAAGGAGAAGCTCTTAACGAGCATGGGGTGAATAAAAATGCA
CATAATACTTTTACTGATTTCATACAACGTATAGGCAGTGCAGGTTATGAACGTTTAAAA
CGTATTTATAATAAATACACATTTGATAACATTCAGTTTCATTTTAACAACAAAAAAATA
TTTTCCTGTGCCAAATTACATTTTGGGTTTTTTATTAATATTTACCATCATCGCACATAC
AAACCCTGGTATGCTAACTAAATACATTATTTTGTATATAAATATATTTATGCGAATGGT
ACTTTTTTAAACAAATCGGCAGTCATACTGCAAAAAAAAAACTAAAATAAATCACAATTG
TATAACAAACAAAAATAATTCTTTAGACATCGAACAACAATCATCAGTTCTTTTTGTGAA
GCTTTGCAGCTGTCGACTTTCAAATACGAGGCAATCTTACCGCGCAGTTAATTTACACTA
TGGATACATATGTACAAATTTGTATAAGTGAAATTGCTACTAAAGTTAATCCTTATCTAC
ACACTGAAGTTTTGCTGTTTTGTCAAACGCTATGAATACAAAAGCTTTACATAGTTACAT
ATTATAATACAAAATGTACACATTGCTACTGGATATTGTAAACTTGACATATTTTTATAT
TTCTACAGACTACTCATATAAAGTTTGATATTATATAATCTTTATTTTAAGGCACCAAAG
CAGCAATTTATTGAGAGTTATCACGTTATTACGCAGTACGTACACACTACAATACTAATT
CATTAGCTGATTAAAGAGAAATCGCAATTCTATCAAACAGAAAAACTATGTAATACAATA
CAAAACTGCTAAAACGTTTCCCGTTTAAGCAATAATAATATAAGATGCTGTATTGGTAAA
ATATTACAAGATATACCCATAATACATTGAGAACAGTCTTGAACATTTTCCCACATACCC
ATGTTATTAGTCCGTTATTTTCAACACACTCATCACTATTATACTTTAGTTCATAATTGA
CATTGTGTCACTTTTTTGAAGACCGCTTCTCATGAGGTGTTTCCAGTTAACCTTGCTTCA
TGGTTTGAGATTAAAGGAAGGTGATCTGACCTGCACCTGAGGAGTATTGAGCGTCGAGCT
GCTGACTTCAGGTGATAAACAACCTTCCTGAGAGTTTTCACTCTCTAAATCTGGCATATT
TATATCCTCAAAGTCTGGAATATTTCCTGTATACGAGATAAGCTGATTCCCTTCAACAAC
ATTGTTAGATGTTTTCGCCCTTTCGTCGGCGGGGTTGTACGATAAGCCGTAAAATGGATC
GTCCGATCCGAATAACCCCATTAAAGTATTAGTATCCAAAGCATAACTGTCGCTTCGCAG
TAGTTCTCTTAACGATTCAAGGTCCGATTGCATTGCGTCTAAATGATCGTCAAGGTCATT
CCTTGTTTGGAATCTGTTTATTTTGTTGTTCGTATTATTGTTCACTGTTGCAAGAGTCAT
ATTGTTCCAATCAAAATCATCTTGAAGCTCAGTCTTGATTGCCGCTAAGTTAATGTTCTG
TGTGTCGTCTTTATTGGACTTCTTAGACTTTTTGGAAGGTTTAAGTCCTTCATTTACTTT
TTCTACTTTTATGTTAATACCACCCAACATTTTGTCTTTAGTTGAAGATACCATTGGGTC
CTCATCAACATCCTGAAGTATATTTTCTATTCCTGTTTCCTCAGCAGTCAGTATCCCCAC
ATCACTTACAGAATCATCACTTGCAAATATTTCAGCTGGAAGCTTAAAATCAGCAGACGG
GTTGAAACTGCTGGGAGATATTAAGCTTCTAGTATTGGAACTAGTAGTCTTGATACGAGG
TTTGGTCTTTGAAGTGCTTGGTGTAATCGTAAATACATTATTAATCGCTGGACTCTGGTT
TAAAGGTGATGAAGGTTTACCCTGAGTTGGAGATGGGGAAGTAATTACTGGCAAATCCTC
ATTGAATCGTAGTCTATTACTCTTGACAGGATATGCGATTTTATTGCCTCCTGATTCAAT
ATCATCACCGTCTTCCATGGTGACATGGTATTGAATATTGGATAATGGGTTTGCTACATT
TTGATTATCAGTGATATTATTCAAATCTGTAGCTACAAAGAATGTAGGGTCAATGGCATC
TTGGGAGGATTCATTTTGCAGTATGTCATCATGTGCCAATTCATGTATTGTAGGTCCATC
CTCCAAATTTTCATCACTTATCTCCTCCAATAAAGGATCCTTGTCTAGCTTAATATTTTT
TAATCTTCCTGGATAAGAGCTTTCAGTGGCAGAATTATGAGCGGCATTATTTATCATCAA
CTGATATGGTCTCTTGACTCCAACATTATTGCCGTTAGTATTAGGGGGTCTTGCTGGTTG
CACCAATGACATCAAAAATTGAATGAGATTGTTCACTATTTGCTGTTGTTTGATATGCTT
CTGCCGCAAAATAGCGACTTCTCTCCATAGTGCTTCATTCTCTTGTTTCATTGCACTAAA
TTTGGCATCGAGGCTTTCTTGTTTTCCTTTCATTTGTTTCACATCAGCTAAAACTTTATT
CATAAGCTCAGGCTTTAACAAAATTTTTTCACCACTTTCATTGCTTGTTACAACAGATTT
TGGAATTGCAATTTTTCTTTTAATATGTTCCAACAAATATGCATGTCCTTTCATAAAACA
GGGATGCGAAAACTCTATTTCGTCTTTTTCATATCTCAAGCCGCCATTTTCAACAGATGT
TATTTTATGAAATCCATACATGTTAAGTTGTCTTATAAAACTTGCCATATTGTTGTGTTT
GTAGTACAGTGGTAAAAGTTCTCTAGCAAAATCTGCCTGATTTTTTATGACAAACGTCTT
TCCACCCGGACTCCAAGATATCAATTGATTTGTTTCAGAATCATTAACCAATTTCCACAG
TTTCCCAAGAAACGCAGGGACACTTGCCCCAATTTCGACAACGGAACGCATTTTTTAAAT
AAATTCTACTGAAATCACATAAAATGTAAAGTCTTCAAATTATCTCACGGTATTTTTTAA
GAAAATTATCAAGTTCGGCAATACACTGCTCAGATCGCCATTTTAATTATAAACACACAC
AACTAAAATATTCCGAAAAGATTACAACGCACACTAACGCAATTTTTACGTAACTACATA
GCTGGTGTAACACATACAAACTACAGCACAGAGACGTCAATAATCAAACCAG
(3532 bp)

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