SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10043_c1_seq2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_cullin-4A_[Papilio_xuthus]
Ontology
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016567 P protein ubiquitination
GO:0031175 P neuron projection development
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031465 C Cul4B-RING E3 ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0035518 P histone H2A monoubiquitination
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045732 P positive regulation of protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0070062 C extracellular exosome
GO:0070914 P UV-damage excision repair
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
Transcript
Level		FPKM:11.77 TPM:12.90
ORF EntryO_BomoFB11513_3prime_partial:A_BomoFB_comp10043_c1_seq2
Sequence
(Nucleotide)
CGTAATGGTGGTGAACCAGTAAACTATTGACTGAGCGGAATTATTTTTATTTGTTTTCTA
GATAATCTAGTTTAGAATTTCATTGTTTAAGTGTAGTGGCTGCGGCCATATCATGCTTGC
TTATGTCGGGATTAGCTGAAACTCCTATTTCTGCCAAAGAAGGCGGTAATCTGTATAAAA
AACGATCACTGCCTGTCAGCGAATCGTGTAGCAAAAGAGTGAAAATCAACGAAATGAGCG
CAGAGGAGAAAATATCAAATTTTTCGCTAGTGAATCCAAATTCTAACGGGATAAAGATGT
CATCAACATCAATGAACAAGCCTGGCGTTACTGCAAAAAAGCTGATAATTAAGAATTTCA
AAAGTAAACCGAACCTTCCAGACAATTATCAGGAAACGACATGGAGCAAGCTGCGGGAAG
CTGTTGTCGCCATTCAGACCTCAAAATCGATAGCCTATTCCTTAGAAGAATTATATCAAG
CCGTCGAAAACATGTGTAGTCATAAGATGGCTTCACAGCTTTATGTTAACTTAACAAACT
TGGTGGAAGCTCATGTGAAAGCCAACATCGAGCAGTTCTTGTCCGAGAGCATGGACAGAC
AGGTCTTTCTAAAGAGGATGGACGACTGCTGGCGAGCTCACTGCCGACAAATGATTATGA
TTAGAAGCATTTTTTTATATTTAGACCGAACCTATGTCCTTCAAAACCCTAGTATACATT
CAATTTGGGACATGGGCCTAGACCTGTTTCGTCACCATATAGCAATGAATACACTTGTCC
AGACTCGTACAGTAGATGGCCTCTTATTACTTATTGAACGTGAGCGAGGAGGTGATTCAG
TAGATATATCTTTGCTGAAGAGTCTTCTACGTATGCTCTCTGATCTACAAATATATCAGG
AAGCATTTGAGCATAAATTCCTTCAAGCAACTGAAAGGCTGTACGCTGCAGAAGGACAAC
GTTTGATGAGGGAACTGGCAGTTCCTGAATACCTTGCCCACGTAGAGAAAAGACTTAAAG
AGGAGAATGATCGCCTTTTACATTATCTGGACCCATCAACCAAATGGCAACTGGTGGTGG
TAGTAGAGAGACAGTTGCTGGGTGAACACGTGGCCGGGATACTCGGTAAGGGCCTGGCTG
CATTGTTGGACGCACCACGACTGCATGACCTGGCCACACTCTACACACTGTTCTCCAGGG
TTAAGGATGGCCTGGCTGAACTTTGTCATCATTTCAATGGTTACATCAAGAAAAAAGGAA
GAACGATAGTAATAGAGCCAGAGCGAGACAAGACAATGGTAACCGAGCTACTCGACTTCA
AAGAACAACTGGACCATGTAGTCAACACTTGCTTCCAGAGAAATGACAAATTCATATACT
CTATGAGAGAAGCCTTTGAATTCTTTATTAATCAGAGGCAGAACAAACCTGCTGAATTAA
TTGCCAAATTTGTGGATCTAAAATTGAGGGCCGGTAATAAAGAAGCAACTGAAGAAGAAT
TAGAACGTCTGCTAGACAAGATAATGGTTTTGTTCCGTTTCATACACGGCAAGGATGTTT
TTGAAGCTTTCTATAAAAAGGATCTAGCAAAGAGATTGCTAGTAGGTAAATCTGCATCGG
TGGACGCTGAGAAGTCGATGCTTAGTAAACTGAAGCAAGAGTGCGGAGGTGGCTTCACCT
GTAAACTAGAAGGAATGTTCAAAGATATGGAGCTATCTAAAGATATCAATATTACATATA
AGCAGCACCTGTCAGCTAGTACGGAGACGAGCGGTCCTGGCGGCGTGGAGCTGTCCGTTC
ACATCCTGACGATGGGCTTCTGGCCGACGTACCGCGCCTGCGAGGTGCGGCTGCCCACGG
AGCTGACGCGGCAGCAGGAACACTTCACCAAGTTTTACCTCGCGAAGCACTCGGGTCGGA
AACTGCACTGGCAACCCACGCTCGGACACTGCGTGCTCAGAGCTAACTTCGCACAGGGTA
ACAAAGAGCTACAGGTTTCGTTATTCCAAGCTCTGGTCCTGTTATTGTTCAACGATGGAG
ACAATCTCTCTTTTGAAGACATTAAGGTTTCCACCAATATAGAGGAGGGAGAGCTCCGCC
GCACGCTGCAGTCCCTGGCGTGCGGCAAGGCGCGCGTGCTGAGCAAGGCGCCGCGCGGTC
GG
(2162 bp)

- SilkBase 1999-2023 -