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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10028_c0_seq4
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_argonaute_2_isoform_X1_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004521 F endoribonuclease activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007279 P pole cell formation
GO:0007349 P cellularization
GO:0007367 P segment polarity determination
GO:0009047 P dosage compensation by hyperactivation of X chromosome
GO:0010526 P negative regulation of transposition, RNA-mediated
GO:0016032 P viral process
GO:0016246 P RNA interference
GO:0016442 C RISC complex
GO:0030422 P production of siRNA involved in RNA interference
GO:0030423 P targeting of mRNA for destruction involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0033227 P dsRNA transport
GO:0035071 P salivary gland cell autophagic cell death
GO:0035087 P siRNA loading onto RISC involved in RNA interference
GO:0035190 P syncytial nuclear migration
GO:0035195 P gene silencing by miRNA
GO:0035197 F siRNA binding
GO:0045071 P negative regulation of viral genome replication
GO:0046872 F metal ion binding
GO:0048102 P autophagic cell death
GO:0051607 P defense response to virus
GO:0070578 C RISC-loading complex
GO:0070868 P obsolete heterochromatin organization involved in chromatin silencing
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:0098586 P cellular response to virus
Transcript
Level		FPKM:19.26 TPM:21.10
ORF EntryO_BomoFB11452_complete:A_BomoFB_comp10028_c0_seq4
Sequence
(Nucleotide)
ATACCTAGTACCTACTCATTCACAATAACATATTCGATCAATTAAATTTCGCGATAGCTT
TATTGCTGAAGTACACAATTGCACACCTTCATAAAGATTTGTACGAAGAGATCATTACCA
CTTTGTAATCATGGCTAGAGGAAAAAACAAAGGTGGTAAGAAAGAGGCACCTGATTCTAC
GAAAACCCCTTCTTCTGAAAGTCAGCCTTCAGAAAGTCAACCTTCAACATCCCAAATTCC
AACTACAGAACCAACAACTACTATTGAAGATGATTTAGGGGGCCTTGGTCTTGGTGAATC
TAGAAAAAGACGGCCCAGGAAGAAGCCAACTGAAAAACAAGAATCATTAGCTCAAGCTGA
ATTGTCAAACCCAAAGCTTACTCAAACTGATAATCCGAAAGCTGAGGTTCCTAAAACAGA
GGCTCCTAAAACCGAGGCTCTTAAACCTGAGGCTCCTATCCCTGAGGCTTGTAAATCTGA
AGCTCCTAAAAGTGAAGAGTCCAAAATCGAAACTAGAGGTTCTAAACCAGAAGCTGCTGC
TGATAAGCCTCAAGATGATGATGATGGTTTGGGTTTGGGGTTAGGTGGTGGGGGACGAAA
AAAAACTCGCAGCAGGAAACCTAAATTTACAGCTGTAGAAACAGACATCAAATATTCAAA
AGCTCCATCAAGTGAACCTGCAATTCCAGGACCATCACAAAGTAAACCAATAACGTCAAC
TGCATCACAGCCTATTCAATATGTACAAAATAAACCAGAGGTCAAAGTGGCCCCTGCAGC
CCCTGTTTTGTACAAGATACCAGATAAAATATTGTCTCCACCCTCAAGAACTGTGCCGAT
TTTAACTAATTATTTGGCTATGAAAATAACAAAACCATTGAAAATTTACCGTTACGACGT
CACATTCAAACCAGATAAACCGAAGAAATTTATTGCACAAGTGTTTAAACTGGTAAAGTC
TAAAGAATTTCCTAAAGAAATCCTTGCCTTTGATCAAACAAAAAATTGTTATTCACTGAC
TCCGCTGCCAAAAATCACCACTGAGAGATATGGTGTAAAAGTGGTGATCAAAGATATGAA
CGGTAAAGACATGCCGTTTGAAGTGTCATTCAAAGCTAGTGGTATAGTAGACTACAATAA
TGTTCTGAAGCATATGGCAACGGGTGGATCATCCCTTAATGCACCAACTGACACCATACA
ATGTATTGACATAGTGTTAAAACAAGGAACATTGGAATCATATGTGAAAGCAGACAGACA
ATACTTCATGCGTCCTGCATCTCCGATTGACTTGGGCGACGGGCTCGAGATGTGGACTGG
TTTATTCCAATCTGCTATATTTACATCGAAAGCCTTCATCAACGTTGATGTTGCACACAA
AGGTTTCCCAAAGAATCAACCTATGATTGATGCTTTCACGCGTGATTTTCGCTTGGACCC
CAACCGTCCAATGGATCGGCAACCAGGTCGTGCTGTTGAAGCTTTCAATGAATTCATTAG
AGGGCTTAAGGTCGTATCGAAGATACTTGGTACCGGACCTTCTTCGGGACAATTACGCGA
GCACATATGCAACGGGGTTGTCGACCCACCGTCACGTCAAACATTTACGTTGGAGAACGA
CAAAGGACCGCCGGTTAGGATGACCGTATACGAATATTTTATGAAAGAGAAAAAATACAG
GATTAAGTATCCGGACTTGAACTGTTTGTGGGTCGGCCCGAAAGACAAGAACATATATCT
ACCGATGGAACTAGTCGAAGTTGCATATGGCCAGGCCCGTAACAAGCAATTAAATGACAG
ACAATTGTCGACAATGGTGAGAGAGGCTGCAACCCCACCTGATGTACGGAAACGTAAGAT
TGAGGAAGTGATTCAGAAGATGAATTACTCGAAGAATCAATTCTTCAAAACATACGGTTT
GGAGATAGCCAATGAGTTTTATCAAGTTGAAGCGAAAATTCTCGAAGCGCCCACATTAGA
AGTGGGTCCACGGCAATTTACTGTACCAAAGAAGGGAGTATGGCAGGCCAACTGTCTTCT
GAAACCGGAAGCTCTGAATTCATGGGGCTTCATTGCCATAGAATTGGATCCACGTGGATG
TAATTATGAAGACATCGTGTCGAAGCTAATGAATACCGGTCGACAAATGGGCATGAACGT
GACCCAACCAAAGATGGCTTGCTTCAACATCCGTATAAATGACCTGCACAAGAGTATGCT
GCACGCTCTAGAAAAACAGGTCAATTTCCTGGTCGTGGTCGTTTCTGGACGGGGCCGCGA
TTATTATCACAAGCTGAAACAGATTGCCGAACTCAAAGTGGGTATACTGACGCAGTGTAT
CAAAGAAGATACCGCCACGCGCCGAATGAACCCACAAACAGCTCGGAACATTTTACTAAA
GGTGAATTCGAAGCTTATGGGAATAAATCAGGCATTGGAGAATCGTTCCATTCCTCAGTG
CTTAAAGGGTGGGGCTGTGATGATCGTGGGCGCTGACGTCACGCATCCATCGCCAGATCA
GAGTAATATACCGAGTATCGCCGCCGTAACCGCCTCGATGGATACGAAATGCTACATATA
CAACATCGAACTGAGTATACAGACACCGAAGAAAGAGATGATCGTTCAGTTTGAGGACAT
AATGGTGGATCATTTCCATGCTTTCAAGAAAAGTCAGGGGATTCTGCCGAAGAAGGTGTT
CGTGTTCCGTGACGGGGTTTCTGAGGGTCAATTTGCTGAGGTAATGAAGAGTGAACTGAC
TGGATTGCATCGCGCCTACCAACGTGTCGCGGGATTGAACGCTAAACCAGAAGTATTGTT
CATTCTTGTACAAAAACGTCATCACACGAGATTCTTCCTGCCCGGGAACAACGCCCGTTT
CAACGTCGATCCGGGGACTGTGGTCGACCGTGATATAGTACATCCACGTGAATTGGACTT
CTATTTGGTGTCTCACCAAGCGATCAAGGGCACGGCTCGTCCGACGCGCTACCACGCCGT
CTGCAACGACGGCAGGATCCCGGAGAACGAAGTGGAGCACCTCGCGTACTACCTGTGCCA
TCTGTACGCGCGTTGTATGCGCGCCGTGTCATACCCCGCGCCGACCTACTACGCGCACTT
GGCCTGTCTGCGGGCTCGCTCGCTCACCTATGGCGAGATATTCAATAATAACGATCTCGA
GAAGAATCCCAAACGTCTCCGGGTCCTCGACAGCATGCTGAAACAGAGCCGTATGTTCTT
CGTCTAACAAGATGATATTTTAAAAATGTATATGTAATCACTATTTAATAAAACACGTAT
AACAACGAATGACTTCATTCGTAATCTTATTATATTAATATCAATAACCATGCCTTTTGC
AATGAAAATTATAAACACGTCTCTTACCCTATAAATATGATTGTTTCATGACAGAAATTA
GATAGCTTTTTGTGTAAAATCAAGATTTTTTTAATGAAAATATAAAACGTATGATTTTTT
TAAGGAAAACTTCTTTGAGTTAATGAAAAATTTAAAAACTAATGTTCTTTGTACCGAGTT
AATCCGGTAGGTTTCGCTCGCACAAAATACAGAAGATAAACCAAAGAAGTTTCACTTCTT
AGTTTTACAGATTTGCATGTGAGACTCAAATAGCCTCAAGCGCTTTTTAGATCGCGGTTG
TCATGTAAAAACCATAATATATTGTATCTCGACATCGGAGGTATAAACTCTGATATAAAT
TGTTTCATCTGTACAAATTGAGTGACTTAAATTATAATTGGTCCAGGATAAGATGTCCGA
GTTTGGTTAAGACCCTACACCATCATCATATTCTCAAATAATATGATATGGTGTTGTTTT
GCGGAGTATATATTGTTTACTCTTGCGCTAGGATTCGTTTTATCAGGTTCTGATGCTTTG
ACACGCATTTATTCGTCTGAAGTCGAGATGTTACTGCTTATTTGCATCTGCTTTTACTGG
TGGTAGGACTTCTTGTGAGTCCGCACGGCTAGGCACCACCACCCTGCCAATTTTTACCAT
GAAGCAGTAATGCGTTTCGG
(4040 bp)

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